BLASTX nr result

ID: Coptis24_contig00027972 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027972
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165911.1| PREDICTED: notchless protein homolog, partia...   134   8e-30
ref|XP_004149723.1| PREDICTED: notchless protein homolog [Cucumi...   134   8e-30
ref|XP_002313318.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
emb|CBI24943.3| unnamed protein product [Vitis vinifera]              129   2e-28
ref|XP_002276009.1| PREDICTED: notchless protein homolog [Vitis ...   129   2e-28

>ref|XP_004165911.1| PREDICTED: notchless protein homolog, partial [Cucumis sativus]
          Length = 403

 Score =  134 bits (337), Expect = 8e-30
 Identities = 66/82 (80%), Positives = 73/82 (89%)
 Frame = +2

Query: 5   NVMCMLTDPEGTTLGAPMSVPQIAGPLQLQQIVNDLLNNEEKLPYAFYISDKELVVQLGA 184
           NVM +LTDPEGT LGAPM +PQ AGP QLQQ+VN LL+NEEKLPYAFYISD+EL V LGA
Sbjct: 15  NVMILLTDPEGTPLGAPMYLPQNAGPQQLQQMVNKLLSNEEKLPYAFYISDQELTVSLGA 74

Query: 185 YLEKNKVSVEKVLRIVYQPQAI 250
           YLEKNKVSVEKVL +VYQPQA+
Sbjct: 75  YLEKNKVSVEKVLTVVYQPQAV 96


>ref|XP_004149723.1| PREDICTED: notchless protein homolog [Cucumis sativus]
          Length = 478

 Score =  134 bits (337), Expect = 8e-30
 Identities = 66/82 (80%), Positives = 73/82 (89%)
 Frame = +2

Query: 5   NVMCMLTDPEGTTLGAPMSVPQIAGPLQLQQIVNDLLNNEEKLPYAFYISDKELVVQLGA 184
           NVM +LTDPEGT LGAPM +PQ AGP QLQQ+VN LL+NEEKLPYAFYISD+EL V LGA
Sbjct: 15  NVMILLTDPEGTPLGAPMYLPQNAGPQQLQQMVNKLLSNEEKLPYAFYISDQELTVSLGA 74

Query: 185 YLEKNKVSVEKVLRIVYQPQAI 250
           YLEKNKVSVEKVL +VYQPQA+
Sbjct: 75  YLEKNKVSVEKVLTVVYQPQAV 96


>ref|XP_002313318.1| predicted protein [Populus trichocarpa] gi|222849726|gb|EEE87273.1|
           predicted protein [Populus trichocarpa]
          Length = 414

 Score =  130 bits (327), Expect = 1e-28
 Identities = 66/82 (80%), Positives = 70/82 (85%)
 Frame = +2

Query: 5   NVMCMLTDPEGTTLGAPMSVPQIAGPLQLQQIVNDLLNNEEKLPYAFYISDKELVVQLGA 184
           NVMC  TDPEGT LGAP+ +PQ AGP QLQQIVN LLNNEEKLPYAFYISD+ELVV L  
Sbjct: 8   NVMCQFTDPEGTPLGAPLYLPQNAGPQQLQQIVNKLLNNEEKLPYAFYISDQELVVPLET 67

Query: 185 YLEKNKVSVEKVLRIVYQPQAI 250
           YL+KNKVSVEKVL IV QPQAI
Sbjct: 68  YLQKNKVSVEKVLAIVCQPQAI 89


>emb|CBI24943.3| unnamed protein product [Vitis vinifera]
          Length = 475

 Score =  129 bits (325), Expect = 2e-28
 Identities = 65/82 (79%), Positives = 70/82 (85%)
 Frame = +2

Query: 5   NVMCMLTDPEGTTLGAPMSVPQIAGPLQLQQIVNDLLNNEEKLPYAFYISDKELVVQLGA 184
           NVMC LTDPEG  LG PM +PQ A P +LQQIVN LLNNEEKLPYAFYISD+ELVVQLG 
Sbjct: 12  NVMCQLTDPEGNHLGPPMYLPQNAAPKELQQIVNKLLNNEEKLPYAFYISDQELVVQLGT 71

Query: 185 YLEKNKVSVEKVLRIVYQPQAI 250
           YL+KNKVSVEKVL IVYQ QA+
Sbjct: 72  YLQKNKVSVEKVLPIVYQLQAV 93


>ref|XP_002276009.1| PREDICTED: notchless protein homolog [Vitis vinifera]
          Length = 477

 Score =  129 bits (325), Expect = 2e-28
 Identities = 65/82 (79%), Positives = 70/82 (85%)
 Frame = +2

Query: 5   NVMCMLTDPEGTTLGAPMSVPQIAGPLQLQQIVNDLLNNEEKLPYAFYISDKELVVQLGA 184
           NVMC LTDPEG  LG PM +PQ A P +LQQIVN LLNNEEKLPYAFYISD+ELVVQLG 
Sbjct: 14  NVMCQLTDPEGNHLGPPMYLPQNAAPKELQQIVNKLLNNEEKLPYAFYISDQELVVQLGT 73

Query: 185 YLEKNKVSVEKVLRIVYQPQAI 250
           YL+KNKVSVEKVL IVYQ QA+
Sbjct: 74  YLQKNKVSVEKVLPIVYQLQAV 95


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