BLASTX nr result

ID: Coptis24_contig00027954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027954
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325770.1| predicted protein [Populus trichocarpa] gi|2...   218   3e-55
ref|XP_002319652.1| predicted protein [Populus trichocarpa] gi|2...   209   1e-52
ref|XP_002281254.1| PREDICTED: activating signal cointegrator 1-...   208   4e-52
emb|CBI23631.3| unnamed protein product [Vitis vinifera]              206   2e-51
emb|CBI23633.3| unnamed protein product [Vitis vinifera]              205   3e-51

>ref|XP_002325770.1| predicted protein [Populus trichocarpa] gi|222862645|gb|EEF00152.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score =  218 bits (556), Expect = 3e-55
 Identities = 106/167 (63%), Positives = 122/167 (73%)
 Frame = -1

Query: 503 VPDSATIKTMEDFYREIYAVNGITDLKFPENYPVSXXXXXXXXXXXXXXXXXVSWEEVPE 324
           VP+  TIKTMEDFYREIYAVNGITDLKFPE+YPVS                  SWE VPE
Sbjct: 46  VPEEDTIKTMEDFYREIYAVNGITDLKFPEHYPVSRLLGCVEVVGCVKCEELASWEAVPE 105

Query: 323 GVRLEGQTKFCWLCEKPQKLIVPLEMRGYQDVYNLERKIYEVAVKGLCSVEGPLPVNFPL 144
           GVRLEGQT FCWLCE+PQKL+VP EMRGYQ VYNLERK+Y  A++GL  V+GP+PV FPL
Sbjct: 106 GVRLEGQTDFCWLCEQPQKLLVPFEMRGYQGVYNLERKVYAAAIRGLVPVKGPMPVKFPL 165

Query: 143 PDPQNPFSLKPGSLNTSFSGSKASQIEKPPNLSXXXXXXXXXATQFS 3
           P+PQ+PFSLKPGS++  FS +KAS +EK   LS         ATQF+
Sbjct: 166 PNPQDPFSLKPGSISVGFSDNKASVVEKSEGLSAAIAGARAAATQFN 212


>ref|XP_002319652.1| predicted protein [Populus trichocarpa] gi|222858028|gb|EEE95575.1|
           predicted protein [Populus trichocarpa]
          Length = 236

 Score =  209 bits (533), Expect = 1e-52
 Identities = 107/177 (60%), Positives = 124/177 (70%), Gaps = 10/177 (5%)
 Frame = -1

Query: 503 VPDSATIKTMEDFYREIYAVNGITDLKFPENYPVSXXXXXXXXXXXXXXXXXV------- 345
           VP+  TIK MEDFYREIYA NGITD+KFPE+YPVS                 V       
Sbjct: 57  VPEEDTIKAMEDFYREIYAANGITDIKFPEHYPVSRLLGIWASVLLMSWCVDVVGCVRCD 116

Query: 344 ---SWEEVPEGVRLEGQTKFCWLCEKPQKLIVPLEMRGYQDVYNLERKIYEVAVKGLCSV 174
              SWE VPEGVRLEGQT FCWLCE+P+KL+VP EMRGYQ VYNLE+KIYE AV+GL SV
Sbjct: 117 ELASWEAVPEGVRLEGQTDFCWLCEQPKKLLVPFEMRGYQRVYNLEKKIYEAAVRGLVSV 176

Query: 173 EGPLPVNFPLPDPQNPFSLKPGSLNTSFSGSKASQIEKPPNLSXXXXXXXXXATQFS 3
           EGP+PV FPLPDPQ+PFSLKPGS++  FS ++AS +EK  +LS         ATQF+
Sbjct: 177 EGPMPVKFPLPDPQDPFSLKPGSISEEFSENEASGVEKSESLSAAIAGARAAATQFN 233


>ref|XP_002281254.1| PREDICTED: activating signal cointegrator 1-like [Vitis vinifera]
          Length = 266

 Score =  208 bits (529), Expect = 4e-52
 Identities = 104/167 (62%), Positives = 119/167 (71%)
 Frame = -1

Query: 503 VPDSATIKTMEDFYREIYAVNGITDLKFPENYPVSXXXXXXXXXXXXXXXXXVSWEEVPE 324
           VPDS TIK ME+FYREIYAVNGI DLKFPE+YPVS                   W+EVPE
Sbjct: 52  VPDSDTIKAMENFYREIYAVNGIADLKFPEHYPVSRLLGCVEVVGCVKCEELACWKEVPE 111

Query: 323 GVRLEGQTKFCWLCEKPQKLIVPLEMRGYQDVYNLERKIYEVAVKGLCSVEGPLPVNFPL 144
           GVRLE QT+FCWLCE+PQKLI+P EMRGYQ +YNLERKIYE AV+GL  V+ PLPV F L
Sbjct: 112 GVRLEAQTEFCWLCEQPQKLIIPFEMRGYQRIYNLERKIYEAAVRGLRPVQAPLPVKFLL 171

Query: 143 PDPQNPFSLKPGSLNTSFSGSKASQIEKPPNLSXXXXXXXXXATQFS 3
           P+PQ+P SLKPGSL + F GSKA++ +KP  L          ATQFS
Sbjct: 172 PEPQDPLSLKPGSLVSCFDGSKAAEDKKPEGLLAAIAGARAAATQFS 218


>emb|CBI23631.3| unnamed protein product [Vitis vinifera]
          Length = 264

 Score =  206 bits (523), Expect = 2e-51
 Identities = 103/167 (61%), Positives = 118/167 (70%)
 Frame = -1

Query: 503 VPDSATIKTMEDFYREIYAVNGITDLKFPENYPVSXXXXXXXXXXXXXXXXXVSWEEVPE 324
           VPDS TIK ME+FYREIYAVNGI DLKFPE+YPVS                   W+EVPE
Sbjct: 45  VPDSDTIKAMENFYREIYAVNGIADLKFPEHYPVSRLLGCIEVVGCVKCEELACWKEVPE 104

Query: 323 GVRLEGQTKFCWLCEKPQKLIVPLEMRGYQDVYNLERKIYEVAVKGLCSVEGPLPVNFPL 144
           GVRLE QT+FCWLCE+PQKLI+P EMRGYQ +YNLERKIYE AV+GL  V+ PLPV F L
Sbjct: 105 GVRLEAQTEFCWLCEQPQKLIIPFEMRGYQRIYNLERKIYEAAVRGLRPVQAPLPVKFLL 164

Query: 143 PDPQNPFSLKPGSLNTSFSGSKASQIEKPPNLSXXXXXXXXXATQFS 3
           P+PQ+P SLKPG L + F GSKA++ +KP  L          ATQFS
Sbjct: 165 PEPQDPLSLKPGLLVSCFDGSKAAEDKKPEGLLAAIAGARAAATQFS 211


>emb|CBI23633.3| unnamed protein product [Vitis vinifera]
          Length = 234

 Score =  205 bits (521), Expect = 3e-51
 Identities = 99/152 (65%), Positives = 114/152 (75%)
 Frame = -1

Query: 503 VPDSATIKTMEDFYREIYAVNGITDLKFPENYPVSXXXXXXXXXXXXXXXXXVSWEEVPE 324
           VPDS TIK ME+FYREIYAVNGI DLKFPE+YPVS                   W+EVPE
Sbjct: 52  VPDSDTIKAMENFYREIYAVNGIADLKFPEHYPVSRLLGCVEVVGCVKCEELACWKEVPE 111

Query: 323 GVRLEGQTKFCWLCEKPQKLIVPLEMRGYQDVYNLERKIYEVAVKGLCSVEGPLPVNFPL 144
           GVRLE QT+FCWLCE+PQKLI+P EMRGYQ +YNLERKIYE AV+GL  V+ PLPV F L
Sbjct: 112 GVRLEAQTEFCWLCEQPQKLIIPFEMRGYQRIYNLERKIYEAAVRGLRPVQAPLPVKFLL 171

Query: 143 PDPQNPFSLKPGSLNTSFSGSKASQIEKPPNL 48
           P+PQ+P SLKPGSL + F GSKA++ +KP  L
Sbjct: 172 PEPQDPLSLKPGSLVSCFDGSKAAEDKKPEGL 203


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