BLASTX nr result
ID: Coptis24_contig00027951
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00027951 (369 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002519431.1| protein with unknown function [Ricinus commu... 83 2e-14 emb|CBI30183.3| unnamed protein product [Vitis vinifera] 81 8e-14 ref|XP_002326397.1| predicted protein [Populus trichocarpa] gi|2... 80 1e-13 ref|XP_002322906.1| predicted protein [Populus trichocarpa] gi|2... 78 9e-13 ref|XP_003535238.1| PREDICTED: uncharacterized protein LOC100809... 77 2e-12 >ref|XP_002519431.1| protein with unknown function [Ricinus communis] gi|223541294|gb|EEF42845.1| protein with unknown function [Ricinus communis] Length = 208 Score = 83.2 bits (204), Expect = 2e-14 Identities = 37/41 (90%), Positives = 38/41 (92%) Frame = -1 Query: 123 MLVPPCLEPLLSTAFFSVCRTHGDAARSECNMYCLDCSGDA 1 MLVPP LE LLSTAFFS+CRTHGDAARSECNMYCLDC GDA Sbjct: 1 MLVPPWLESLLSTAFFSICRTHGDAARSECNMYCLDCRGDA 41 >emb|CBI30183.3| unnamed protein product [Vitis vinifera] Length = 204 Score = 81.3 bits (199), Expect = 8e-14 Identities = 35/41 (85%), Positives = 38/41 (92%) Frame = -1 Query: 123 MLVPPCLEPLLSTAFFSVCRTHGDAARSECNMYCLDCSGDA 1 M VPP LEPLL+T FFS+CRTHGDAARSECNMYCLDCSGD+ Sbjct: 1 MPVPPWLEPLLTTPFFSICRTHGDAARSECNMYCLDCSGDS 41 >ref|XP_002326397.1| predicted protein [Populus trichocarpa] gi|222833590|gb|EEE72067.1| predicted protein [Populus trichocarpa] Length = 202 Score = 80.5 bits (197), Expect = 1e-13 Identities = 36/44 (81%), Positives = 38/44 (86%) Frame = -1 Query: 132 MESMLVPPCLEPLLSTAFFSVCRTHGDAARSECNMYCLDCSGDA 1 M+ MLVPP LE LLST FF+VCRTH DAARSECNMYCLDC GDA Sbjct: 1 MDKMLVPPWLESLLSTQFFTVCRTHEDAARSECNMYCLDCEGDA 44 >ref|XP_002322906.1| predicted protein [Populus trichocarpa] gi|222867536|gb|EEF04667.1| predicted protein [Populus trichocarpa] Length = 201 Score = 77.8 bits (190), Expect = 9e-13 Identities = 34/41 (82%), Positives = 37/41 (90%) Frame = -1 Query: 123 MLVPPCLEPLLSTAFFSVCRTHGDAARSECNMYCLDCSGDA 1 MLVPP LE LLST+FF+VCRTHGDAAR+ECNMYCLDC G A Sbjct: 1 MLVPPWLESLLSTSFFTVCRTHGDAARNECNMYCLDCEGGA 41 >ref|XP_003535238.1| PREDICTED: uncharacterized protein LOC100809455 [Glycine max] Length = 208 Score = 76.6 bits (187), Expect = 2e-12 Identities = 33/44 (75%), Positives = 40/44 (90%) Frame = -1 Query: 132 MESMLVPPCLEPLLSTAFFSVCRTHGDAARSECNMYCLDCSGDA 1 M +MLVPP LEPLL+T+FF+VCR HGDAARSECNM+CLDC+ +A Sbjct: 1 MGTMLVPPWLEPLLNTSFFNVCRIHGDAARSECNMFCLDCNENA 44