BLASTX nr result
ID: Coptis24_contig00027945
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00027945 (302 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003604112.1| Synaptic vesicle 2-related protein [Medicago... 77 2e-12 ref|XP_002273636.1| PREDICTED: synaptic vesicle 2-related protei... 76 3e-12 ref|XP_002310345.1| predicted protein [Populus trichocarpa] gi|2... 76 3e-12 emb|CAN64534.1| hypothetical protein VITISV_042940 [Vitis vinifera] 76 3e-12 ref|XP_002330449.1| predicted protein [Populus trichocarpa] gi|2... 75 6e-12 >ref|XP_003604112.1| Synaptic vesicle 2-related protein [Medicago truncatula] gi|355505167|gb|AES86309.1| Synaptic vesicle 2-related protein [Medicago truncatula] Length = 499 Score = 76.6 bits (187), Expect = 2e-12 Identities = 38/79 (48%), Positives = 45/79 (56%) Frame = +1 Query: 1 VYIYAPEIYPXXXXXXXXXXXXXXXXXXXMVCPLVAVGLVQGCHRTASXXXXXXXXXXSG 180 VYIYAPEIYP M+CPLVAVGLV GCH+TA+ SG Sbjct: 412 VYIYAPEIYPTSVRTTGVGVASSVGRIGGMLCPLVAVGLVHGCHQTAAVLLFIIVALVSG 471 Query: 181 VAVIYFPFETKGCELSDSV 237 + V++FPFET G EL D+V Sbjct: 472 ICVVFFPFETMGQELQDTV 490 >ref|XP_002273636.1| PREDICTED: synaptic vesicle 2-related protein [Vitis vinifera] gi|297735684|emb|CBI18371.3| unnamed protein product [Vitis vinifera] Length = 495 Score = 75.9 bits (185), Expect = 3e-12 Identities = 39/89 (43%), Positives = 47/89 (52%) Frame = +1 Query: 1 VYIYAPEIYPXXXXXXXXXXXXXXXXXXXMVCPLVAVGLVQGCHRTASXXXXXXXXXXSG 180 VYIYAPEIYP M+CPLVAVGLV GCH+ A+ SG Sbjct: 407 VYIYAPEIYPTSVRTTGVGVASSVGRIGGMLCPLVAVGLVHGCHQAAAVILFEIVIFISG 466 Query: 181 VAVIYFPFETKGCELSDSVLKKTQSKIVI 267 + VI FPFETKG EL D++ Q ++ Sbjct: 467 ICVILFPFETKGRELKDTLSSSEQVNSIL 495 >ref|XP_002310345.1| predicted protein [Populus trichocarpa] gi|222853248|gb|EEE90795.1| predicted protein [Populus trichocarpa] Length = 463 Score = 75.9 bits (185), Expect = 3e-12 Identities = 37/79 (46%), Positives = 46/79 (58%) Frame = +1 Query: 1 VYIYAPEIYPXXXXXXXXXXXXXXXXXXXMVCPLVAVGLVQGCHRTASXXXXXXXXXXSG 180 VYIYAPE+YP MVCPLVAV LVQGCH+TA+ +G Sbjct: 380 VYIYAPELYPTFMRTTGVGVASSVSRIGGMVCPLVAVSLVQGCHQTAAVVFFASIVFVAG 439 Query: 181 VAVIYFPFETKGCELSDSV 237 + V+ FPFETKG +L+DS+ Sbjct: 440 ICVLLFPFETKGLDLADSL 458 >emb|CAN64534.1| hypothetical protein VITISV_042940 [Vitis vinifera] Length = 461 Score = 75.9 bits (185), Expect = 3e-12 Identities = 39/89 (43%), Positives = 47/89 (52%) Frame = +1 Query: 1 VYIYAPEIYPXXXXXXXXXXXXXXXXXXXMVCPLVAVGLVQGCHRTASXXXXXXXXXXSG 180 VYIYAPEIYP M+CPLVAVGLV GCH+ A+ SG Sbjct: 373 VYIYAPEIYPTSVRTTGVGVASSVGRIGGMLCPLVAVGLVHGCHQAAAVILFEIVIFISG 432 Query: 181 VAVIYFPFETKGCELSDSVLKKTQSKIVI 267 + VI FPFETKG EL D++ Q ++ Sbjct: 433 ICVILFPFETKGRELKDTLSSSEQVNSIL 461 >ref|XP_002330449.1| predicted protein [Populus trichocarpa] gi|222871861|gb|EEF08992.1| predicted protein [Populus trichocarpa] Length = 503 Score = 75.1 bits (183), Expect = 6e-12 Identities = 38/86 (44%), Positives = 46/86 (53%) Frame = +1 Query: 1 VYIYAPEIYPXXXXXXXXXXXXXXXXXXXMVCPLVAVGLVQGCHRTASXXXXXXXXXXSG 180 V+IYAPEIYP M+CPLVAV LVQGCH+TA+ +G Sbjct: 406 VFIYAPEIYPTSVRSTGIGVASSMGRIGGMICPLVAVSLVQGCHQTAALILFVCIIFVAG 465 Query: 181 VAVIYFPFETKGCELSDSVLKKTQSK 258 V+ FPFETKG EL+DS+ K Sbjct: 466 CCVMLFPFETKGLELTDSISSTKNEK 491