BLASTX nr result

ID: Coptis24_contig00027944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027944
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64923.1| hypothetical protein VITISV_017202 [Vitis vinifera]    50   6e-12
emb|CAN61586.1| hypothetical protein VITISV_042821 [Vitis vinifera]    50   8e-12
emb|CAN83738.1| hypothetical protein VITISV_014440 [Vitis vinifera]    50   8e-12
emb|CAN82939.1| hypothetical protein VITISV_013126 [Vitis vinifera]    49   1e-11
emb|CAN74759.1| hypothetical protein VITISV_011400 [Vitis vinifera]    48   3e-11

>emb|CAN64923.1| hypothetical protein VITISV_017202 [Vitis vinifera]
          Length = 739

 Score = 49.7 bits (117), Expect(4) = 6e-12
 Identities = 25/37 (67%), Positives = 31/37 (83%)
 Frame = +2

Query: 53  VTLIKSTLASMRIYFLSLLIIPISVAEVLEKMMRDFL 163
           +TLIKSTLAS+ IYFLSL+ IP SV + +EK+ RDFL
Sbjct: 401 ITLIKSTLASIPIYFLSLIRIPKSVTKRIEKIQRDFL 437



 Score = 33.1 bits (74), Expect(4) = 6e-12
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +1

Query: 199 KEYGGFGFRGIRDVNSSLLSKWIW 270
           KE GG G R I  +N +LL KW+W
Sbjct: 459 KEEGGLGIRKIDVLNKALLGKWVW 482



 Score = 28.1 bits (61), Expect(4) = 6e-12
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = +3

Query: 6   KQLAIWKSKYLSKGGRL 56
           ++LA WK +Y+SKGGR+
Sbjct: 385 RRLAQWKRQYISKGGRI 401



 Score = 22.7 bits (47), Expect(4) = 6e-12
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +2

Query: 248 LCYPSGFGQWKDVIRD 295
           +C P G G WK+++++
Sbjct: 512 VCGPYGVGVWKEIMKE 527


>emb|CAN61586.1| hypothetical protein VITISV_042821 [Vitis vinifera]
          Length = 1302

 Score = 50.4 bits (119), Expect(4) = 8e-12
 Identities = 25/37 (67%), Positives = 31/37 (83%)
 Frame = +2

Query: 53   VTLIKSTLASMRIYFLSLLIIPISVAEVLEKMMRDFL 163
            +TLIKSTLAS+ IYFLSL+ IP SV + +EK+ RDFL
Sbjct: 978  ITLIKSTLASIPIYFLSLIXIPKSVTKRIEKIQRDFL 1014



 Score = 32.0 bits (71), Expect(4) = 8e-12
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +1

Query: 199  KEYGGFGFRGIRDVNSSLLSKWIW 270
            KE GG G R I  +N  LL KW+W
Sbjct: 1036 KEEGGLGIRKIDLLNKXLLGKWVW 1059



 Score = 28.1 bits (61), Expect(4) = 8e-12
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = +3

Query: 6    KQLAIWKSKYLSKGGRL 56
            ++LA WK +Y+SKGGR+
Sbjct: 962  RRLAQWKRQYISKGGRI 978



 Score = 22.7 bits (47), Expect(4) = 8e-12
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +2

Query: 248  LCYPSGFGQWKDVIRD 295
            +C P G G WK+++++
Sbjct: 1089 VCGPYGVGLWKEIMKE 1104


>emb|CAN83738.1| hypothetical protein VITISV_014440 [Vitis vinifera]
          Length = 666

 Score = 49.7 bits (117), Expect(4) = 8e-12
 Identities = 25/37 (67%), Positives = 31/37 (83%)
 Frame = +2

Query: 53  VTLIKSTLASMRIYFLSLLIIPISVAEVLEKMMRDFL 163
           +TLIKSTLAS+ IYFLSL+ IP SV + +EK+ RDFL
Sbjct: 429 ITLIKSTLASIPIYFLSLIRIPKSVTKRIEKIQRDFL 465



 Score = 32.7 bits (73), Expect(4) = 8e-12
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +1

Query: 199 KEYGGFGFRGIRDVNSSLLSKWIW 270
           KE GG G R I  +N +LL KW+W
Sbjct: 487 KEEGGLGIRKIDLLNKALLGKWVW 510



 Score = 28.1 bits (61), Expect(4) = 8e-12
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = +3

Query: 6   KQLAIWKSKYLSKGGRL 56
           ++LA WK +Y+SKGGR+
Sbjct: 413 RRLAQWKRQYISKGGRI 429



 Score = 22.7 bits (47), Expect(4) = 8e-12
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +2

Query: 248 LCYPSGFGQWKDVIRD 295
           +C P G G WK+++++
Sbjct: 540 VCGPYGVGLWKEIMKE 555


>emb|CAN82939.1| hypothetical protein VITISV_013126 [Vitis vinifera]
          Length = 2416

 Score = 48.5 bits (114), Expect(4) = 1e-11
 Identities = 24/37 (64%), Positives = 31/37 (83%)
 Frame = +2

Query: 53   VTLIKSTLASMRIYFLSLLIIPISVAEVLEKMMRDFL 163
            +TLIKSTLAS+ IYFLSL+ IP SV + +EK+ +DFL
Sbjct: 1474 ITLIKSTLASIPIYFLSLIRIPKSVTKRIEKIQKDFL 1510



 Score = 32.7 bits (73), Expect(4) = 1e-11
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +1

Query: 199  KEYGGFGFRGIRDVNSSLLSKWIW 270
            KE GG G R I  +N +LL KW+W
Sbjct: 1532 KEEGGLGIRKIDLLNKALLGKWVW 1555



 Score = 28.5 bits (62), Expect(4) = 1e-11
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = +3

Query: 6    KQLAIWKSKYLSKGGRL 56
            ++LA WK +Y+SKGGR+
Sbjct: 1458 RRLAQWKKQYISKGGRI 1474



 Score = 22.7 bits (47), Expect(4) = 1e-11
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +2

Query: 248  LCYPSGFGQWKDVIRD 295
            +C P G G WK+++++
Sbjct: 1585 VCGPYGVGLWKEIMKE 1600


>emb|CAN74759.1| hypothetical protein VITISV_011400 [Vitis vinifera]
          Length = 1540

 Score = 47.8 bits (112), Expect(4) = 3e-11
 Identities = 24/37 (64%), Positives = 31/37 (83%)
 Frame = +2

Query: 53   VTLIKSTLASMRIYFLSLLIIPISVAEVLEKMMRDFL 163
            +TLIKSTLAS+ IY LSL+ IP +VA+ +EK+ RDFL
Sbjct: 1258 ITLIKSTLASIPIYLLSLIRIPKAVAKRIEKIQRDFL 1294



 Score = 32.7 bits (73), Expect(4) = 3e-11
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +1

Query: 199  KEYGGFGFRGIRDVNSSLLSKWIW 270
            KE GG G R I  +N +LL KW+W
Sbjct: 1316 KEEGGLGIRKIDLLNKALLGKWVW 1339



 Score = 28.1 bits (61), Expect(4) = 3e-11
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = +3

Query: 6    KQLAIWKSKYLSKGGRL 56
            ++LA WK +Y+SKGGR+
Sbjct: 1242 RRLAQWKMQYISKGGRI 1258



 Score = 22.7 bits (47), Expect(4) = 3e-11
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +2

Query: 248  LCYPSGFGQWKDVIRD 295
            +C P G G WK+++++
Sbjct: 1369 VCGPYGVGLWKEIMKE 1384


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