BLASTX nr result
ID: Coptis24_contig00027925
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00027925
(1479 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283806.2| PREDICTED: uncharacterized protein LOC100243... 412 e-113
ref|XP_002511058.1| tyrosyl-DNA phosphodiesterase, putative [Ric... 403 e-110
ref|XP_002318192.1| predicted protein [Populus trichocarpa] gi|2... 391 e-106
emb|CBI20080.3| unnamed protein product [Vitis vinifera] 377 e-102
ref|XP_002871268.1| predicted protein [Arabidopsis lyrata subsp.... 366 7e-99
>ref|XP_002283806.2| PREDICTED: uncharacterized protein LOC100243589 [Vitis vinifera]
Length = 1091
Score = 412 bits (1060), Expect = e-113
Identities = 202/349 (57%), Positives = 263/349 (75%), Gaps = 8/349 (2%)
Frame = -3
Query: 1024 ILESADPISFIRNELSRDNNVPVDTLRQQHCVLISSS-------SGKKFFLNRLQCEEEN 866
++ SA P + N + ++N+ +Q H V+ + + GKKF+LNRL+ +
Sbjct: 329 VIASAKPKTLSSNSMGKEND------QQFHGVMHNKTWGTSCPPPGKKFYLNRLEFMNYS 382
Query: 865 RLVDDQEEMVVSLPELLHPVESLTRMFIATFTCDILWFLQYCEVPNNLPVTIACHNTKRC 686
V+SLPELL PVE+L+R+F+ATFT D+LWFL YC+VP +LPVTIACH+T+RC
Sbjct: 383 ---SSGNHTVISLPELLFPVENLSRIFVATFTSDVLWFLSYCKVPGHLPVTIACHHTERC 439
Query: 685 WSSSPDKRMSAPFENFPNLLVIYPPFPDVIAFGKDRKKQGIACHHPKLLVLQRDSSIRIV 506
WSSS DKR P+ ++PNL++++PPFP+ IAFG+DRKK G+ACHHPKLLVLQR+ SIRI+
Sbjct: 440 WSSSADKRAYVPYSDYPNLVIVHPPFPEAIAFGRDRKKLGVACHHPKLLVLQREDSIRII 499
Query: 505 VTSANLVSKQWNSVTNTVWWQDFPRRCQPDYSALFTSTEEGKME-GFKSDFAAQLAGFMA 329
+TSANLV+KQWNSVTNTVWWQDFPR PDYS++FT +G++ +SDFAAQLAGFMA
Sbjct: 500 ITSANLVAKQWNSVTNTVWWQDFPRISPPDYSSIFTQFCDGEINLDSRSDFAAQLAGFMA 559
Query: 328 SLVVDVPSEAYWITELTKYEFGGANGYLIASVPGMHSHKTPYPLESKYFLSGNHCVARLS 149
SLV+DVPS+A+WI ELTKY+F GA G+L+ASVPG+H H+TP+ +S FL C +
Sbjct: 560 SLVIDVPSQAHWIMELTKYDFKGATGHLVASVPGIHFHRTPHASKSMQFLHNASCSFGM- 618
Query: 148 RIKFLGSVEASLVGLKHRFHSAADSNGAALKTLAAFLRKCQENEFGMLE 2
KFLGS+EAS+VGL H FH+AAD+NGA LK LAAFL KC +NE+GM E
Sbjct: 619 --KFLGSIEASIVGLSHLFHTAADANGAHLKKLAAFLGKCHKNEYGMSE 665
Score = 115 bits (289), Expect = 2e-23
Identities = 73/165 (44%), Positives = 89/165 (53%), Gaps = 29/165 (17%)
Frame = -3
Query: 1396 NRLYTIGRNTQYCDIVFNDPRVSNRHCQIFLDGSARKIFIFDGFK--------------I 1259
+R TIGR+ Q CD V D RVS +HCQI DG RKIFI DG + +
Sbjct: 64 DRPCTIGRSHQSCDYVLEDRRVSKQHCQILFDGFHRKIFILDGGRFRTKGDLDKLEETAV 123
Query: 1258 RSSLNGVFANGLRIGEGKFVELSVGDEVNFVCNSSNNHVEKIGFVIERVVFTDLTENKR- 1082
R SLNG+F NG +IG+ ELS GDEV+FVC + GF+I+R+VFT+ R
Sbjct: 124 RPSLNGIFLNGFKIGKDTLKELSAGDEVSFVCQNE----RLAGFLIQRIVFTEEALEGRG 179
Query: 1081 ------LINGDPTG--------RAVFLLNRCRMILESADPISFIR 989
IN PT RA F L +CR IL S DPIS+IR
Sbjct: 180 EAASSGPINPSPTSESDDLITRRANFYLGQCRCILNSDDPISYIR 224
>ref|XP_002511058.1| tyrosyl-DNA phosphodiesterase, putative [Ricinus communis]
gi|223550173|gb|EEF51660.1| tyrosyl-DNA
phosphodiesterase, putative [Ricinus communis]
Length = 1148
Score = 403 bits (1036), Expect = e-110
Identities = 190/304 (62%), Positives = 239/304 (78%), Gaps = 1/304 (0%)
Frame = -3
Query: 910 GKKFFLNRLQCEEENRLVDDQEEMVVSLPELLHPVESLTRMFIATFTCDILWFLQYCEVP 731
GKKF+LNRL E + VVSLPELLHP+E++ R+FIATFT DILWFL YCE+P
Sbjct: 424 GKKFYLNRLHFMEHGSF---SHQNVVSLPELLHPIENIMRIFIATFTSDILWFLSYCEIP 480
Query: 730 NNLPVTIACHNTKRCWSSSPDKRMSAPFENFPNLLVIYPPFPDVIAFGKDRKKQGIACHH 551
++LPVTIACHNT+RCWSS+PDKR+S P+ NFPNL V++PPFP+ IAFG DR++QGIACHH
Sbjct: 481 SHLPVTIACHNTERCWSSNPDKRISMPYSNFPNLSVVFPPFPEAIAFGNDRRRQGIACHH 540
Query: 550 PKLLVLQRDSSIRIVVTSANLVSKQWNSVTNTVWWQDFPRRCQPDYSALFTSTEEGKM-E 374
PKLLVLQR++SIR+++TSANLV QW++VTNT+WWQDFPRR PD S+LFT +G++ +
Sbjct: 541 PKLLVLQRENSIRVIITSANLVPNQWHNVTNTIWWQDFPRRSTPDLSSLFTRVSDGEISQ 600
Query: 373 GFKSDFAAQLAGFMASLVVDVPSEAYWITELTKYEFGGANGYLIASVPGMHSHKTPYPLE 194
+SDFAAQLAGF+ASLV+DVPS+A+W+ ELTKY F GA GYL+AS+PG+HS TPY +
Sbjct: 601 DSRSDFAAQLAGFIASLVIDVPSQAHWVVELTKYNFDGALGYLVASIPGIHSRGTPYACQ 660
Query: 193 SKYFLSGNHCVARLSRIKFLGSVEASLVGLKHRFHSAADSNGAALKTLAAFLRKCQENEF 14
+ +KFLGSVEAS+VGL H FH++ D+NGA LK LAAFL + EN +
Sbjct: 661 ---------YAMKSIDVKFLGSVEASVVGLSHLFHTSTDTNGALLKKLAAFLGRFPENAY 711
Query: 13 GMLE 2
GM E
Sbjct: 712 GMSE 715
Score = 91.3 bits (225), Expect = 6e-16
Identities = 76/256 (29%), Positives = 103/256 (40%), Gaps = 94/256 (36%)
Frame = -3
Query: 1474 TGFLHLKSLDXXXXXXXXXXXT---CLNSNRLYTIGRNTQY--CDIVFNDPRVSNRHCQI 1310
+ F+HL+SLD CL +R YTIGR++ CD VF+D RVS +HCQI
Sbjct: 45 SAFIHLQSLDVPLISPATGSPLDSICLEPDRPYTIGRSSTDPDCDFVFSDRRVSKQHCQI 104
Query: 1309 FLDGSARKIFIFDG------------------------------------FKIRSSLNGV 1238
D RK++I DG +IR S+NGV
Sbjct: 105 LFDSVNRKVYILDGILLLHSISSIRVVSEFRKRLRNYDQLEGEEKEGFECLRIRFSMNGV 164
Query: 1237 FANGLRIGEGKFVELSVGDEVNFVCNSSN--NHVEKIGFVIERVVFTD------------ 1100
F NG+R+ G EL GDEV FVC + N +IGF+I+ VVF +
Sbjct: 165 FINGIRVKRGIVRELCTGDEVLFVCGNEGLCNLGVRIGFLIQGVVFKEEVVIGSNEIQLG 224
Query: 1099 ------------------------------LTENKRLIN---------GDPTGRAVFLLN 1037
+ N+ + N G RA FL++
Sbjct: 225 RPCLLGTSSMSVGHSQGSVSSGSRTKRVFAVRANEVMANEYDFLELKLGGIVKRARFLVS 284
Query: 1036 RCRMILESADPISFIR 989
+CR IL S DPIS+ +
Sbjct: 285 QCRQILHSGDPISYFQ 300
>ref|XP_002318192.1| predicted protein [Populus trichocarpa] gi|222858865|gb|EEE96412.1|
predicted protein [Populus trichocarpa]
Length = 1131
Score = 391 bits (1004), Expect = e-106
Identities = 193/310 (62%), Positives = 237/310 (76%), Gaps = 7/310 (2%)
Frame = -3
Query: 910 GKKFFLNRLQCEEENRLVDDQEEMVVSLPELLHPVESLTRMFIATFTCDILWFLQYCEVP 731
GKKF+LNRLQ + V+SLPELL+PVES++R+FIATFT DILWFL +CE+P
Sbjct: 422 GKKFYLNRLQFMDHGSFTHPN---VISLPELLYPVESISRIFIATFTSDILWFLSHCEIP 478
Query: 730 NNLPVTIACHNTKRCWSSSPDKRMSAPFENFPNLLVIYPPFPDVIAFGKDRKKQGIACHH 551
+LPVTIACHNT+RCWSSSPD R S P+ +FPNL+V++PPFP+ IAFG+DRK++GIACHH
Sbjct: 479 CHLPVTIACHNTERCWSSSPDNRTSVPYSDFPNLVVVFPPFPESIAFGQDRKRRGIACHH 538
Query: 550 PKLLVLQRDSSIRIVVTSANLVSKQ------WNSVTNTVWWQDFPRRCQPDYSALFTSTE 389
PKLLVLQR+ SIR+++TSANLVS Q WN+VTNTVWWQDFP R PD S LF
Sbjct: 539 PKLLVLQREDSIRVIITSANLVSNQVVAHSKWNNVTNTVWWQDFPARSAPDPSPLFIRVS 598
Query: 388 EGKM-EGFKSDFAAQLAGFMASLVVDVPSEAYWITELTKYEFGGANGYLIASVPGMHSHK 212
+G + +SDFAAQLAGFMA LV++VPS+AYWI+ELTKY+F GANG+L+ASVPG+HS +
Sbjct: 599 DGDANKDSRSDFAAQLAGFMACLVINVPSQAYWISELTKYDFEGANGHLVASVPGIHSRR 658
Query: 211 TPYPLESKYFLSGNHCVARLSRIKFLGSVEASLVGLKHRFHSAADSNGAALKTLAAFLRK 32
+P + SG ++FLGSVEAS+VGL H FH+AAD NG LK LAAFL K
Sbjct: 659 SPNAYQLPSGSSG---------VQFLGSVEASVVGLSHLFHTAADRNGTQLKQLAAFLGK 709
Query: 31 CQENEFGMLE 2
C EN +GM E
Sbjct: 710 CCENVYGMSE 719
>emb|CBI20080.3| unnamed protein product [Vitis vinifera]
Length = 1032
Score = 377 bits (968), Expect = e-102
Identities = 190/355 (53%), Positives = 250/355 (70%), Gaps = 8/355 (2%)
Frame = -3
Query: 1042 LNRCRMILESADPISFIRNELSRDNNVPVDTLRQQHCVLISSS-------SGKKFFLNRL 884
LNR +++ A P + N + ++N+ +Q H V+ + + GKKF+LNRL
Sbjct: 283 LNRQSVLVSDAKPKTLSSNSMGKEND------QQFHGVMHNKTWGTSCPPPGKKFYLNRL 336
Query: 883 QCEEENRLVDDQEEMVVSLPELLHPVESLTRMFIATFTCDILWFLQYCEVPNNLPVTIAC 704
+ + V+SLPELL PVE+L+R+F+ATFT D+LWFL YC+VP +LPVTIAC
Sbjct: 337 EFMNYS---SSGNHTVISLPELLFPVENLSRIFVATFTSDVLWFLSYCKVPGHLPVTIAC 393
Query: 703 HNTKRCWSSSPDKRMSAPFENFPNLLVIYPPFPDVIAFGKDRKKQGIACHHPKLLVLQRD 524
H+T+RCWSSS DKR P+ ++PNL++++PPFP+ IAFG+DRKK G+ACHHPKLLVLQR+
Sbjct: 394 HHTERCWSSSADKRAYVPYSDYPNLVIVHPPFPEAIAFGRDRKKLGVACHHPKLLVLQRE 453
Query: 523 SSIRIVVTSANLVSKQWNSVTNTVWWQDFPRRCQPDYSALFTSTEEGKME-GFKSDFAAQ 347
SIRI++TSANLV+KQWNSVTNTVWWQDFPR PDYS++FT +G++ +SDFAAQ
Sbjct: 454 DSIRIIITSANLVAKQWNSVTNTVWWQDFPRISPPDYSSIFTQFCDGEINLDSRSDFAAQ 513
Query: 346 LAGFMASLVVDVPSEAYWITELTKYEFGGANGYLIASVPGMHSHKTPYPLESKYFLSGNH 167
LAGFMASLV+DVPS+A+WI ELTKY+F GA G+L+ASVPG+H H+TP+ +S FL N
Sbjct: 514 LAGFMASLVIDVPSQAHWIMELTKYDFKGATGHLVASVPGIHFHRTPHASKSMQFLHAN- 572
Query: 166 CVARLSRIKFLGSVEASLVGLKHRFHSAADSNGAALKTLAAFLRKCQENEFGMLE 2
++ S AD+NGA LK LAAFL KC +NE+GM E
Sbjct: 573 ---------------------QNASCSFADANGAHLKKLAAFLGKCHKNEYGMSE 606
Score = 115 bits (289), Expect = 2e-23
Identities = 73/165 (44%), Positives = 89/165 (53%), Gaps = 29/165 (17%)
Frame = -3
Query: 1396 NRLYTIGRNTQYCDIVFNDPRVSNRHCQIFLDGSARKIFIFDGFK--------------I 1259
+R TIGR+ Q CD V D RVS +HCQI DG RKIFI DG + +
Sbjct: 55 DRPCTIGRSHQSCDYVLEDRRVSKQHCQILFDGFHRKIFILDGGRFRTKGDLDKLEETAV 114
Query: 1258 RSSLNGVFANGLRIGEGKFVELSVGDEVNFVCNSSNNHVEKIGFVIERVVFTDLTENKR- 1082
R SLNG+F NG +IG+ ELS GDEV+FVC + GF+I+R+VFT+ R
Sbjct: 115 RPSLNGIFLNGFKIGKDTLKELSAGDEVSFVCQNE----RLAGFLIQRIVFTEEALEGRG 170
Query: 1081 ------LINGDPTG--------RAVFLLNRCRMILESADPISFIR 989
IN PT RA F L +CR IL S DPIS+IR
Sbjct: 171 EAASSGPINPSPTSESDDLITRRANFYLGQCRCILNSDDPISYIR 215
>ref|XP_002871268.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297317105|gb|EFH47527.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 1083
Score = 366 bits (940), Expect = 7e-99
Identities = 183/327 (55%), Positives = 232/327 (70%), Gaps = 5/327 (1%)
Frame = -3
Query: 967 NVP----VDTLRQQHCVLISSSS-GKKFFLNRLQCEEENRLVDDQEEMVVSLPELLHPVE 803
N+P +D + C L + + GK F+LNRLQ E+N + VVSLPELLHPVE
Sbjct: 342 NIPDISCIDKEKSHLCSLPAPPAPGKNFYLNRLQYIEQN---STGSQRVVSLPELLHPVE 398
Query: 802 SLTRMFIATFTCDILWFLQYCEVPNNLPVTIACHNTKRCWSSSPDKRMSAPFENFPNLLV 623
S+ ++FIAT T DILWFL CE+P++LPVTIACH+ +RCWSSSPD R +AP N+PN+ +
Sbjct: 399 SIQQIFIATLTSDILWFLTCCEIPSHLPVTIACHHAERCWSSSPDARSTAPLPNYPNVTM 458
Query: 622 IYPPFPDVIAFGKDRKKQGIACHHPKLLVLQRDSSIRIVVTSANLVSKQWNSVTNTVWWQ 443
++PPFP+ IAFGKDRK +GIACHHPKL +LQR+ SIR+++TSANLV++QWN VTNTVWWQ
Sbjct: 459 VFPPFPEEIAFGKDRKNRGIACHHPKLFILQREVSIRVIITSANLVARQWNDVTNTVWWQ 518
Query: 442 DFPRRCQPDYSALFTSTEEGKMEGFKSDFAAQLAGFMASLVVDVPSEAYWITELTKYEFG 263
DFPRR PD +LF G K+DF AQLAGF ASL+ DVPS+A+WI E TKY F
Sbjct: 519 DFPRRADPDVLSLFGHCRRETNHGLKTDFCAQLAGFAASLLTDVPSQAHWIIEFTKYNFE 578
Query: 262 GANGYLIASVPGMHSHKTPYPLESKYFLSGNHCVARLSRIKFLGSVEASLVGLKHRFHSA 83
+ +L+ASVPG+HS+K Y ES C +FLGSVEAS+VGL + F SA
Sbjct: 579 HSACHLVASVPGIHSYKPSYLTESV-------CSNTNFNEEFLGSVEASVVGLSYLFRSA 631
Query: 82 ADSNGAALKTLAAFLRKCQENEFGMLE 2
DS G LK LA+++R+ +EN GMLE
Sbjct: 632 NDSTGLQLKRLASYIRRARENSLGMLE 658
Score = 80.5 bits (197), Expect = 1e-12
Identities = 62/216 (28%), Positives = 93/216 (43%), Gaps = 70/216 (32%)
Frame = -3
Query: 1405 LNSNRLYTIGRNTQ--YCDIVFNDPRVSNRHCQIFLDGSARKIFIFDG------------ 1268
+ S+R YT GR++ +CD VF+ +S +HCQI D + K++IFDG
Sbjct: 34 IESDRPYTFGRSSSNGFCDFVFDHSSISRKHCQILFDSQSHKLYIFDGVIVLPSVSFSQV 93
Query: 1267 ----------------FKIRSSLNGVFANGLRIGEGKFVELSVGDEVNFVCNSSN---NH 1145
K SLNGVF N +R+ + K E+S+GDEV FVC NH
Sbjct: 94 YDEFRRRLVDFEDLGNLKFSVSLNGVFVNRVRVRKAKIQEVSIGDEVLFVCGKEGLCYNH 153
Query: 1144 VEKIGFVIERV-------------------VFTDLTENKRL-------INGDPTG----- 1058
++GF ++ + F+ +KR+ IN +G
Sbjct: 154 -GRVGFRVQEIDFEGRDTSIISVSSGHSRGTFSSGKRSKRVFAPMENEINSPVSGVCPRK 212
Query: 1057 ------RAVFLLNRCRMILESADPISFIRNELSRDN 968
R L++ CR IL S DP+S +R + D+
Sbjct: 213 AVGVAERVNSLVSYCRHILSSDDPMSCLRVSIISDS 248