BLASTX nr result

ID: Coptis24_contig00027919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027919
         (1072 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|2...   161   2e-37
ref|XP_002526725.1| conserved hypothetical protein [Ricinus comm...   150   5e-34
ref|XP_002271836.1| PREDICTED: uncharacterized protein LOC100241...   147   6e-33
ref|XP_002269711.1| PREDICTED: uncharacterized protein LOC100240...   143   6e-32
emb|CAN68941.1| hypothetical protein VITISV_028996 [Vitis vinifera]   143   6e-32

>ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|222861800|gb|EEE99342.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score =  161 bits (408), Expect = 2e-37
 Identities = 90/244 (36%), Positives = 142/244 (58%), Gaps = 4/244 (1%)
 Frame = +3

Query: 6   LRRNLERRIIPGSNFLKKFISNHDHLFRALKNRISQFDKNLD-GVMGNITTLRDYGAQEC 182
           L R+LE +I+P  NFLK  + + + +  A K     F ++L   ++ N+  LR  G  + 
Sbjct: 157 LTRSLENQIVPSYNFLKTILRSDEKIVSAFKRTTWIFLEDLSKNLIPNLELLRKVGVPQS 216

Query: 183 SIVWILVCQPRALVVKNDRLKETVEAVIKMGFVPSSGMFRYAVRAKAGVC-ESGWEAKWQ 359
            I  +L   P A++  ++   E VE V KMGF P+   F  AV A  G C +S WE  ++
Sbjct: 217 CISLLLTHFPEAMMENHEEFSENVEEVRKMGFDPNKSTFVLAVHALCGKCNKSIWERCFE 276

Query: 360 GYRKLGFSDEEIVSVFRKDPYCLMSSVEKIRKGVEFFTRKLRWKLGDICECPVILRLSLE 539
            Y++ G++ ++I+S FRK P+C+M S +KI KG++FF  K+ W   +I  CPVIL LSLE
Sbjct: 277 VYKRWGWTKDDILSAFRKHPHCMMLSEKKIMKGLDFFVNKMGWPSKEIVHCPVILFLSLE 336

Query: 540 RRIVPRCNVLELLNSKGII--EFNMNVCSLPAAXXXXXXXXXXXXVNKYKEALPEVLKAY 713
           +RI+PRC V+++L SKG+I  + ++N   LP              V K++E +P++L  Y
Sbjct: 337 KRIIPRCKVIQVLWSKGLIKKDISLNTVLLPV-----EKRFLERFVTKFEEEVPQLLSVY 391

Query: 714 SGRI 725
            G++
Sbjct: 392 EGKV 395


>ref|XP_002526725.1| conserved hypothetical protein [Ricinus communis]
           gi|223533914|gb|EEF35639.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 441

 Score =  150 bits (379), Expect = 5e-34
 Identities = 83/238 (34%), Positives = 137/238 (57%), Gaps = 2/238 (0%)
 Frame = +3

Query: 6   LRRNLERRIIPGSNFLKKFISNHDHLFRALKNRISQF--DKNLDGVMGNITTLRDYGAQE 179
           L  + E ++IP  NF++  +S+ + +  A+K R+ +    ++L   + NI  L++ G  +
Sbjct: 196 LHTSTENQLIPAFNFIQNLLSSDEKVICAIK-RLPKILLSQSLGYAISNINLLKEVGLPQ 254

Query: 180 CSIVWILVCQPRALVVKNDRLKETVEAVIKMGFVPSSGMFRYAVRAKAGVCESGWEAKWQ 359
            SIVW+L   P  L+ K DR  ET+EAV ++G  PS   F  A+ A  G+ +S WE K+ 
Sbjct: 255 SSIVWLLRYHPATLMTKLDRFAETIEAVKRLGLNPSLINFVIAIHAMRGMSKSTWEKKFD 314

Query: 360 GYRKLGFSDEEIVSVFRKDPYCLMSSVEKIRKGVEFFTRKLRWKLGDICECPVILRLSLE 539
            Y+K G+S EE + VF K P+ +M S +KI K ++++  K+ W    I + P+++ LSLE
Sbjct: 315 IYKKWGWSQEETLVVFGKFPWVMMYSEKKIMKMMDYYINKMGWDSSSIAKHPLLISLSLE 374

Query: 540 RRIVPRCNVLELLNSKGIIEFNMNVCSLPAAXXXXXXXXXXXXVNKYKEALPEVLKAY 713
           +R++PRC+V+++L SKG++     + SL  +            V  YKE  P +LK Y
Sbjct: 375 KRVIPRCSVIQVLLSKGLV----RLTSLATSLRISEELFLHKFVRPYKEEAPHLLKLY 428


>ref|XP_002271836.1| PREDICTED: uncharacterized protein LOC100241175 [Vitis vinifera]
          Length = 410

 Score =  147 bits (370), Expect = 6e-33
 Identities = 83/241 (34%), Positives = 141/241 (58%), Gaps = 1/241 (0%)
 Frame = +3

Query: 6   LRRNLERRIIPGSNFLKKFISNHDHLFRALKNRISQFDKNLD-GVMGNITTLRDYGAQEC 182
           L R+L+ +IIP  NF K  +   + +  A+K     F ++++  ++ NIT L++ G  E 
Sbjct: 155 LSRSLDNQIIPCYNFFKSILHLDNRVVSAIKRSPRIFLEDVNKNIVPNITALQEIGVPES 214

Query: 183 SIVWILVCQPRALVVKNDRLKETVEAVIKMGFVPSSGMFRYAVRAKAGVCESGWEAKWQG 362
           SIV+++   P  + +K+DR  ETV+ V++MGF P + +F  A++   G+ +S WE K + 
Sbjct: 215 SIVFLITYYPIVVQLKHDRFGETVKKVMEMGFDPLTVVFIKAIQVFGGMSKSTWEQKMEV 274

Query: 363 YRKLGFSDEEIVSVFRKDPYCLMSSVEKIRKGVEFFTRKLRWKLGDICECPVILRLSLER 542
           YR+ G+S++EIV +FR  P C+  S +KI   ++F   K+ WKL +I   P+ L  +LE+
Sbjct: 275 YRRWGWSNDEIVLLFRAFPACMSLSEKKIMSTMDFLVNKMGWKLTEITRFPISLGFNLEK 334

Query: 543 RIVPRCNVLELLNSKGIIEFNMNVCSLPAAXXXXXXXXXXXXVNKYKEALPEVLKAYSGR 722
           RI+PRC V ++L  KG+++ ++   SL A             V KY+  +P++L  Y G 
Sbjct: 335 RIIPRCWVGKVLMLKGLVKKDL---SLGAFLRYTESKFLDRFVIKYQNHIPQLLNLYKGE 391

Query: 723 I 725
           +
Sbjct: 392 V 392


>ref|XP_002269711.1| PREDICTED: uncharacterized protein LOC100240848 [Vitis vinifera]
          Length = 502

 Score =  143 bits (361), Expect = 6e-32
 Identities = 79/241 (32%), Positives = 132/241 (54%), Gaps = 1/241 (0%)
 Frame = +3

Query: 6   LRRNLERRIIPGSNFLKKFISNHDHLFRALKNRISQFDKNL-DGVMGNITTLRDYGAQEC 182
           L+R+LE  +IP  NFLK     H+++ +A         K++ D +  N+  L++ G    
Sbjct: 179 LKRSLENHLIPSYNFLKSMDMVHENIVKAFSRSYWLTGKSVQDTIASNVEILKEIGVPMS 238

Query: 183 SIVWILVCQPRALVVKNDRLKETVEAVIKMGFVPSSGMFRYAVRAKAGVCESGWEAKWQG 362
           +I  ++   P A+    ++   +VE V +MG  P    F  AV+   GV ES WE K Q 
Sbjct: 239 NISSLVAMHPCAVFQNREKFSRSVEKVFEMGINPLRVTFLKAVQVICGVAESMWEHKMQV 298

Query: 363 YRKLGFSDEEIVSVFRKDPYCLMSSVEKIRKGVEFFTRKLRWKLGDICECPVILRLSLER 542
           YR+ GF+D+EI+ +FR DP C+ SS +KI   ++F   K+ W+   I   P +   SLE+
Sbjct: 299 YRQWGFTDDEIMLMFRLDPLCIKSSEKKIMSVMDFLVNKMGWEPASIARYPTVFLRSLEK 358

Query: 543 RIVPRCNVLELLNSKGIIEFNMNVCSLPAAXXXXXXXXXXXXVNKYKEALPEVLKAYSGR 722
           +I+PRC+V+++L  KG+++ ++ +  L  +            V KY++ +PE+L  Y G+
Sbjct: 359 KIIPRCSVVKVLQMKGLVKKDLCLGILGCS----EENFFDKFVVKYEQDVPELLNVYQGK 414

Query: 723 I 725
           I
Sbjct: 415 I 415


>emb|CAN68941.1| hypothetical protein VITISV_028996 [Vitis vinifera]
          Length = 2634

 Score =  143 bits (361), Expect = 6e-32
 Identities = 79/241 (32%), Positives = 132/241 (54%), Gaps = 1/241 (0%)
 Frame = +3

Query: 6   LRRNLERRIIPGSNFLKKFISNHDHLFRALKNRISQFDKNL-DGVMGNITTLRDYGAQEC 182
           L+R+LE  +IP  NFLK     H+++ +A         K++ D +  N+  L++ G    
Sbjct: 144 LKRSLENHLIPSYNFLKSMDMVHENIVKAFSRSYWLTGKSVQDTIASNVEILKEIGVPMS 203

Query: 183 SIVWILVCQPRALVVKNDRLKETVEAVIKMGFVPSSGMFRYAVRAKAGVCESGWEAKWQG 362
           +I  ++   P A+    ++   +VE V +MG  P    F  AV+   GV ES WE K Q 
Sbjct: 204 NISSLVAMHPCAVFQNREKFSRSVEKVFEMGINPLRVTFLKAVQVICGVAESMWEHKMQV 263

Query: 363 YRKLGFSDEEIVSVFRKDPYCLMSSVEKIRKGVEFFTRKLRWKLGDICECPVILRLSLER 542
           YR+ GF+D+EI+ +FR DP C+ SS +KI   ++F   K+ W+   I   P +   SLE+
Sbjct: 264 YRQWGFTDDEIMLMFRLDPLCIKSSEKKIMSVMDFLVNKMGWEPASIARYPTVFLRSLEK 323

Query: 543 RIVPRCNVLELLNSKGIIEFNMNVCSLPAAXXXXXXXXXXXXVNKYKEALPEVLKAYSGR 722
           +I+PRC+V+++L  KG+++ ++ +  L  +            V KY++ +PE+L  Y G+
Sbjct: 324 KIIPRCSVVKVLQMKGLVKKDLCLGILGCS----EENFFDKFVVKYEQDVPELLNVYQGK 379

Query: 723 I 725
           I
Sbjct: 380 I 380



 Score =  136 bits (342), Expect = 1e-29
 Identities = 78/241 (32%), Positives = 132/241 (54%), Gaps = 1/241 (0%)
 Frame = +3

Query: 6    LRRNLERRIIPGSNFLKKFISNHDHLFRALKNRISQFDKNLDGVMG-NITTLRDYGAQEC 182
            L+R+LE  +IP  NFLK  +  ++++ RAL        ++L  +M  NI  L + G    
Sbjct: 1360 LKRSLENHVIPSYNFLKSVLMVNENIVRALNKSYWLHGQSLQNIMAPNIAILXEIGVPMS 1419

Query: 183  SIVWILVCQPRALVVKNDRLKETVEAVIKMGFVPSSGMFRYAVRAKAGVCESGWEAKWQG 362
            +I +++ C P A+    ++   +V+ VI+MGF P    F  AV+    +  S WE K + 
Sbjct: 1420 NISFLVTCHPGAVSQNKEKFSRSVKMVIEMGFDPLRVPFVKAVQVIMEMGXSMWEHKMEV 1479

Query: 363  YRKLGFSDEEIVSVFRKDPYCLMSSVEKIRKGVEFFTRKLRWKLGDICECPVILRLSLER 542
            YR+ G +D+EI+ +FR DP C+ SS +KI   ++F   K+ WK   I   P +   SLE+
Sbjct: 1480 YRRWGLTDDEIMLMFRLDPLCMKSSEKKIMSVMDFLVNKMGWKPAAIARYPTVFLRSLEK 1539

Query: 543  RIVPRCNVLELLNSKGIIEFNMNVCSLPAAXXXXXXXXXXXXVNKYKEALPEVLKAYSGR 722
             I+P C+V+++L  KG+++ ++ +  L +             + KY+  +PE+L  Y G+
Sbjct: 1540 XIIPWCSVVKVLQMKGLVKKDLCLSFLGS----NEKNXFNRFMVKYEXDVPELLNVYQGK 1595

Query: 723  I 725
            I
Sbjct: 1596 I 1596



 Score =  136 bits (342), Expect = 1e-29
 Identities = 78/241 (32%), Positives = 132/241 (54%), Gaps = 1/241 (0%)
 Frame = +3

Query: 6    LRRNLERRIIPGSNFLKKFISNHDHLFRALKNRISQFDKNLDGV-MGNITTLRDYGAQEC 182
            L+R+LE  +IP  NFLK     ++++ RAL+       +++    + NI TL++ G    
Sbjct: 1891 LKRSLENHVIPNYNFLKSVGMINENIARALRRTYWLTGQSVQTTNVPNIATLKEIGVPMS 1950

Query: 183  SIVWILVCQPRALVVKNDRLKETVEAVIKMGFVPSSGMFRYAVRAKAGVCESGWEAKWQG 362
            +I + L C P A+    ++    V+ VI+MGF P    F  AVR   G+ ES WE K + 
Sbjct: 1951 NISFFLTCHPSAVSQNKEKFSTNVKKVIEMGFDPLRVTFLKAVRLICGMGESMWEHKMEV 2010

Query: 363  YRKLGFSDEEIVSVFRKDPYCLMSSVEKIRKGVEFFTRKLRWKLGDICECPVILRLSLER 542
            YR+ GF+D+EI+ +   DP C+ SS  KI   ++F   K+ W+   I   P +   SLE+
Sbjct: 2011 YRRWGFTDDEIMLMIXLDPLCMTSSERKIMSVMDFLVNKMGWEPAAIGRYPTVFLRSLEK 2070

Query: 543  RIVPRCNVLELLNSKGIIEFNMNVCSLPAAXXXXXXXXXXXXVNKYKEALPEVLKAYSGR 722
            +I+P C+V+++L  K +++ ++++  L ++            V KY+  +PE+L  Y G+
Sbjct: 2071 KIIPWCSVVKVLQIKXLVKKDLSLSFLGSS----KKNFFNRFVVKYEHDVPELLNVYQGK 2126

Query: 723  I 725
            I
Sbjct: 2127 I 2127



 Score =  134 bits (338), Expect = 3e-29
 Identities = 76/236 (32%), Positives = 132/236 (55%), Gaps = 1/236 (0%)
 Frame = +3

Query: 6    LRRNLERRIIPGSNFLKKFISNHDHLFRALKNRISQFDKNLDGVM-GNITTLRDYGAQEC 182
            LRR+LE  +IP  NFLK  +  ++++ RAL        ++L  ++  NI  L+D G    
Sbjct: 998  LRRSLENHVIPSYNFLKSVVMVNENIVRALNKSYWLNGQSLPNIIVPNIEILKDIGVPMS 1057

Query: 183  SIVWILVCQPRALVVKNDRLKETVEAVIKMGFVPSSGMFRYAVRAKAGVCESGWEAKWQG 362
            +I +++ C P A+   N +   +V+ VI+MGF P    F  AV+    + ES WE K + 
Sbjct: 1058 NISFLVTCHPSAVSQNNVKFARSVKMVIEMGFDPLRVKFLKAVQVIVEMAESMWEHKMEV 1117

Query: 363  YRKLGFSDEEIVSVFRKDPYCLMSSVEKIRKGVEFFTRKLRWKLGDICECPVILRLSLER 542
            YR+ G +D++I+ +FR DP C+ SS +KI   ++F   K+ W+   I   P +   SLE+
Sbjct: 1118 YRRWGLTDDQIMLMFRLDPLCMKSSEKKIMSVMDFLVNKMGWEPAAIGRYPTVFLRSLEK 1177

Query: 543  RIVPRCNVLELLNSKGIIEFNMNVCSLPAAXXXXXXXXXXXXVNKYKEALPEVLKA 710
            +I+P C+V+++L  KG+++ ++ V  L +             V KY++ +PE++ +
Sbjct: 1178 KIIPWCSVVKVLQMKGLVKKDLCVSFLGSG----EKNFFNRFVVKYEQDVPELVNS 1229



 Score =  132 bits (333), Expect = 1e-28
 Identities = 73/241 (30%), Positives = 125/241 (51%), Gaps = 1/241 (0%)
 Frame = +3

Query: 6    LRRNLERRIIPGSNFLKKFISNHDHLFRALKNRISQFDKNLDGVMG-NITTLRDYGAQEC 182
            LRR+LE  +IP  NFLK  +  ++++ RA K       +N+   +  NI  L + G    
Sbjct: 625  LRRSLENHVIPSYNFLKSVVMVNENIVRAFKKTFWISGQNVQNAIAPNIAILEEIGVPMS 684

Query: 183  SIVWILVCQPRALVVKNDRLKETVEAVIKMGFVPSSGMFRYAVRAKAGVCESGWEAKWQG 362
            ++ +++ C P  +    ++   +V+ VI+MGF P    F  A+     + ES  E K + 
Sbjct: 685  NMKFLVTCHPNVVSQNREKFSRSVKKVIEMGFNPLRLSFLKAIEVSCQLTESMLEHKMEV 744

Query: 363  YRKLGFSDEEIVSVFRKDPYCLMSSVEKIRKGVEFFTRKLRWKLGDICECPVILRLSLER 542
            YR+ G +D+EI+S+FR DP C+ SS +KI   ++F   K+ W+       P +   SLE+
Sbjct: 745  YRRWGLTDDEIMSMFRLDPLCMKSSEKKIMSVMDFLVNKMGWEPAAFARYPTVFLCSLEK 804

Query: 543  RIVPRCNVLELLNSKGIIEFNMNVCSLPAAXXXXXXXXXXXXVNKYKEALPEVLKAYSGR 722
            + +PRC+ ++ L  KG+++ ++    L               V KY++  PE+L  Y G+
Sbjct: 805  KXIPRCSAVKXLQMKGLVKKDLCFGFL----YSNDKNFSDKFVLKYEQDXPELLNVYQGK 860

Query: 723  I 725
            I
Sbjct: 861  I 861



 Score =  127 bits (319), Expect = 5e-27
 Identities = 71/241 (29%), Positives = 124/241 (51%), Gaps = 1/241 (0%)
 Frame = +3

Query: 6    LRRNLERRIIPGSNFLKKFISNHDHLFRALKNRISQFDKNLDGVMG-NITTLRDYGAQEC 182
            LRR+LE  +IP  NFLK  +  ++ + RAL        + L   +  NI  L++ G    
Sbjct: 2380 LRRSLENHVIPSYNFLKSVVIVNEKIVRALSKSYWLNGQTLQNTIAPNIEILKEIGVPIS 2439

Query: 183  SIVWILVCQPRALVVKNDRLKETVEAVIKMGFVPSSGMFRYAVRAKAGVCESGWEAKWQG 362
             I + + C P A+     +    V+ V +MGF P    F  AV+    + ES WE K + 
Sbjct: 2440 KISFFVTCHPSAVSQNKKKFSRIVKMVTEMGFDPLRVKFVKAVKVICEMGESMWEHKMEV 2499

Query: 363  YRKLGFSDEEIVSVFRKDPYCLMSSVEKIRKGVEFFTRKLRWKLGDICECPVILRLSLER 542
            YR  G +D++I+ +F+ DP C+ +S  KI   ++F   K+ W+   +   P +   SLE+
Sbjct: 2500 YRGWGLTDDDIMLMFKSDPLCMAASERKIMSVMDFLVNKMGWEHAAVVRYPTVFLCSLEK 2559

Query: 543  RIVPRCNVLELLNSKGIIEFNMNVCSLPAAXXXXXXXXXXXXVNKYKEALPEVLKAYSGR 722
            +I+P C+V++++  KG+++ ++ +C L               V +Y++ + E+L  Y G+
Sbjct: 2560 KIIPWCSVVKVIQMKGLVKKDLCLCIL----GYSEKNFFNRFVVRYEQDVAELLNVYQGK 2615

Query: 723  I 725
            I
Sbjct: 2616 I 2616


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