BLASTX nr result

ID: Coptis24_contig00027918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027918
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283486.2| PREDICTED: uncharacterized protein LOC100254...   144   1e-32
emb|CBI19369.3| unnamed protein product [Vitis vinifera]              135   5e-30
ref|XP_002510057.1| ATP binding protein, putative [Ricinus commu...   128   4e-28
ref|XP_002320674.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_004166741.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   113   1e-23

>ref|XP_002283486.2| PREDICTED: uncharacterized protein LOC100254027 [Vitis vinifera]
          Length = 846

 Score =  144 bits (362), Expect = 1e-32
 Identities = 72/126 (57%), Positives = 90/126 (71%)
 Frame = -2

Query: 379 MKIDNLSSLVTSSDHEKNRQGHISTRQHLTEEGTDKQNSCDRDSFQTPTFKAVPNEFVAR 200
           MKIDNLSSLVT SD ++ +    S RQ L EE  D  ++   D F TP FKAVPN FV +
Sbjct: 413 MKIDNLSSLVTLSDCDR-KSSQDSARQSLKEESIDSHSTGHGDGFSTPCFKAVPNAFVVK 471

Query: 199 RTNYSRLPEFSPVPDNFSSVADEDMWLKMNKGYTADIDALQFTPARRTHSLPSNDRSLDY 20
           R+NYSRLP++SP+PD  S+VADED WLKMNKGY AD+D+LQ TPARR  S P+++ +   
Sbjct: 472 RSNYSRLPDYSPLPDAISNVADEDTWLKMNKGYVADLDSLQITPARRVQSFPTSEATPGC 531

Query: 19  STDCYK 2
           S + YK
Sbjct: 532 SKENYK 537


>emb|CBI19369.3| unnamed protein product [Vitis vinifera]
          Length = 840

 Score =  135 bits (339), Expect = 5e-30
 Identities = 69/126 (54%), Positives = 86/126 (68%)
 Frame = -2

Query: 379 MKIDNLSSLVTSSDHEKNRQGHISTRQHLTEEGTDKQNSCDRDSFQTPTFKAVPNEFVAR 200
           MKIDNLSSLVT SD +         R+   EE  D  ++   D F TP FKAVPN FV +
Sbjct: 415 MKIDNLSSLVTLSDCD---------RKSSQEESIDSHSTGHGDGFSTPCFKAVPNAFVVK 465

Query: 199 RTNYSRLPEFSPVPDNFSSVADEDMWLKMNKGYTADIDALQFTPARRTHSLPSNDRSLDY 20
           R+NYSRLP++SP+PD  S+VADED WLKMNKGY AD+D+LQ TPARR  S P+++ +   
Sbjct: 466 RSNYSRLPDYSPLPDAISNVADEDTWLKMNKGYVADLDSLQITPARRVQSFPTSEATPGC 525

Query: 19  STDCYK 2
           S + YK
Sbjct: 526 SKENYK 531


>ref|XP_002510057.1| ATP binding protein, putative [Ricinus communis]
           gi|223550758|gb|EEF52244.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 842

 Score =  128 bits (322), Expect = 4e-28
 Identities = 64/117 (54%), Positives = 82/117 (70%)
 Frame = -2

Query: 379 MKIDNLSSLVTSSDHEKNRQGHISTRQHLTEEGTDKQNSCDRDSFQTPTFKAVPNEFVAR 200
           MKIDNLS+ VT  + +K+     + RQ   EE  D  +    D F+TP FKAVPN FVA 
Sbjct: 414 MKIDNLSNCVTFPECDKD-----AGRQSGREESNDSNSRSPGDIFRTPRFKAVPNAFVAN 468

Query: 199 RTNYSRLPEFSPVPDNFSSVADEDMWLKMNKGYTADIDALQFTPARRTHSLPSNDRS 29
           R+NYS LP+FSP+PD  S+VADED W+KMNKGY AD+D++Q TP+R+  S PS+D S
Sbjct: 469 RSNYSGLPDFSPLPDTLSNVADEDTWMKMNKGYIADLDSIQMTPSRKVQSFPSSDIS 525


>ref|XP_002320674.1| predicted protein [Populus trichocarpa] gi|222861447|gb|EEE98989.1|
           predicted protein [Populus trichocarpa]
          Length = 816

 Score =  116 bits (290), Expect = 2e-24
 Identities = 63/127 (49%), Positives = 79/127 (62%), Gaps = 1/127 (0%)
 Frame = -2

Query: 379 MKIDNLSSLVTSSDHEKNRQGHISTRQHLTEEGTDKQNSCDRDSFQ-TPTFKAVPNEFVA 203
           MKIDNLS+  + SD                          DR+S Q TPT KA  N FV 
Sbjct: 418 MKIDNLSTSASFSDS-------------------------DRNSIQITPTLKADSNAFVG 452

Query: 202 RRTNYSRLPEFSPVPDNFSSVADEDMWLKMNKGYTADIDALQFTPARRTHSLPSNDRSLD 23
           +R+NYSRLP+FSP+PDN+S+VADED WLKMNKG+ AD+D++Q TPAR+  S P  D +L 
Sbjct: 453 KRSNYSRLPDFSPLPDNYSNVADEDTWLKMNKGFIADLDSIQMTPARKVQSFPFGDVTLG 512

Query: 22  YSTDCYK 2
            ST+ YK
Sbjct: 513 SSTEDYK 519


>ref|XP_004166741.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101212317
           [Cucumis sativus]
          Length = 814

 Score =  113 bits (283), Expect = 1e-23
 Identities = 58/115 (50%), Positives = 77/115 (66%)
 Frame = -2

Query: 379 MKIDNLSSLVTSSDHEKNRQGHISTRQHLTEEGTDKQNSCDRDSFQTPTFKAVPNEFVAR 200
           MKI++L++LV  S+  +N     S +    E+     N    D F TP FKA PN FVA+
Sbjct: 410 MKIESLNNLVNLSESLQN-----SVKNTQREDFGGSCNKSHEDGFVTPCFKAPPNAFVAK 464

Query: 199 RTNYSRLPEFSPVPDNFSSVADEDMWLKMNKGYTADIDALQFTPARRTHSLPSND 35
           R++YS  PEFSP+PD FS+VADED WLK+NKG+ AD+D+LQ TPAR+  S P N+
Sbjct: 465 RSDYSIPPEFSPLPDAFSNVADEDAWLKLNKGFVADLDSLQTTPARKVQSFPFNE 519


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