BLASTX nr result

ID: Coptis24_contig00027915 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027915
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20163.3| unnamed protein product [Vitis vinifera]              157   8e-37
ref|XP_002283414.1| PREDICTED: probable disease resistance prote...   157   8e-37
ref|XP_002333023.1| predicted protein [Populus trichocarpa] gi|2...   155   2e-36
ref|XP_002333267.1| BED finger-nbs-lrr resistance protein [Popul...   154   5e-36
gb|ABF81424.1| NBS-LRR type disease resistance protein [Populus ...   154   5e-36

>emb|CBI20163.3| unnamed protein product [Vitis vinifera]
          Length = 984

 Score =  157 bits (397), Expect = 8e-37
 Identities = 77/148 (52%), Positives = 106/148 (71%), Gaps = 2/148 (1%)
 Frame = +2

Query: 2   GLPLAIITVGWAMRKVNNIRVWRNALEELKNS-RAEIEGMEEDVFARLKFSYNHLKNDRI 178
           GLPLAI+T   +M    +I  WRNAL EL+   +     ME DVF  L+FSYN L ++++
Sbjct: 335 GLPLAIVTTARSMSVAYDIAEWRNALNELREHVKGHTINMENDVFKILEFSYNRLNDEKL 394

Query: 179 QSCLLYCALYPEDYKIDIEDLVEYWMAEGLIDEVGDREKEIDKGHTILNELKDACMLESI 358
           Q CLLYCAL+PEDYKI    L+ YW+AEGLI+E+G R+ E D+GH ILN+L++ C+LE  
Sbjct: 395 QECLLYCALFPEDYKIRRVLLIRYWIAEGLIEEMGSRQAERDRGHAILNKLENVCLLEKC 454

Query: 359 -GARWVKMHDLVRDMAISITREPPQFII 439
              + VKMHD++RDMAI+ITR+  +F++
Sbjct: 455 ENGKCVKMHDVIRDMAINITRKNSRFMV 482


>ref|XP_002283414.1| PREDICTED: probable disease resistance protein At4g27220-like
           [Vitis vinifera]
          Length = 1016

 Score =  157 bits (397), Expect = 8e-37
 Identities = 77/148 (52%), Positives = 106/148 (71%), Gaps = 2/148 (1%)
 Frame = +2

Query: 2   GLPLAIITVGWAMRKVNNIRVWRNALEELKNS-RAEIEGMEEDVFARLKFSYNHLKNDRI 178
           GLPLAI+T   +M    +I  WRNAL EL+   +     ME DVF  L+FSYN L ++++
Sbjct: 335 GLPLAIVTTARSMSVAYDIAEWRNALNELREHVKGHTINMENDVFKILEFSYNRLNDEKL 394

Query: 179 QSCLLYCALYPEDYKIDIEDLVEYWMAEGLIDEVGDREKEIDKGHTILNELKDACMLESI 358
           Q CLLYCAL+PEDYKI    L+ YW+AEGLI+E+G R+ E D+GH ILN+L++ C+LE  
Sbjct: 395 QECLLYCALFPEDYKIRRVLLIRYWIAEGLIEEMGSRQAERDRGHAILNKLENVCLLEKC 454

Query: 359 -GARWVKMHDLVRDMAISITREPPQFII 439
              + VKMHD++RDMAI+ITR+  +F++
Sbjct: 455 ENGKCVKMHDVIRDMAINITRKNSRFMV 482


>ref|XP_002333023.1| predicted protein [Populus trichocarpa] gi|222834655|gb|EEE73118.1|
           predicted protein [Populus trichocarpa]
          Length = 681

 Score =  155 bits (393), Expect = 2e-36
 Identities = 77/151 (50%), Positives = 104/151 (68%), Gaps = 5/151 (3%)
 Frame = +2

Query: 2   GLPLAIITVGWAMRKVNNIRVWRNALEELKNSRAEIEGMEEDVFARLKFSYNHLKNDRIQ 181
           GLPL IIT+   MR V ++R WRNALEELK S+   + ME +VF  L+FSYNHL +  +Q
Sbjct: 48  GLPLGIITMAATMRGVVDVREWRNALEELKESKVRKDDMEPEVFHILRFSYNHLSDSALQ 107

Query: 182 SCLLYCALYPEDYKIDIEDLVEYWMAEGLIDEVGDREKEIDKGHTILNELKDACMLESI- 358
            C LYCAL+PED+KI  +DLV Y + EG+I  +  RE E D+GH++LN L++ C+LE   
Sbjct: 108 QCFLYCALFPEDFKIRRDDLVAYLIDEGVIKGLKSREAEFDRGHSMLNRLQNVCLLEGAK 167

Query: 359 ----GARWVKMHDLVRDMAISITREPPQFII 439
                 R++KMHDL+RDMAI I +E  Q ++
Sbjct: 168 EGYGNDRYIKMHDLIRDMAIQILQENSQGMV 198


>ref|XP_002333267.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222835868|gb|EEE74289.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 1077

 Score =  154 bits (390), Expect = 5e-36
 Identities = 80/153 (52%), Positives = 103/153 (67%), Gaps = 7/153 (4%)
 Frame = +2

Query: 2   GLPLAIITVGWAMRKVNNIRVWRNALEELKNSRAEIEGMEEDVFARLKFSYNHLKNDRIQ 181
           GLPL I T+   MR V++I  WRNALEELK SR  +E M+E+VF  L+FSY HLK   +Q
Sbjct: 429 GLPLGIKTMAGTMRGVDDICEWRNALEELKQSRVRLEDMDEEVFQILRFSYMHLKESALQ 488

Query: 182 SCLLYCALYPEDYKIDIEDLVEYWMAEGLIDEVGDREKEIDKGHTILNELKDACMLESIG 361
            C L+CAL+PED+ I  EDL+ Y + EG+I  +  RE E DKGHT+LN+L+ AC+LE   
Sbjct: 489 QCFLHCALFPEDFMIPREDLIAYLIDEGVIKGLTRREAEFDKGHTMLNKLESACLLEDAK 548

Query: 362 -------ARWVKMHDLVRDMAISITREPPQFII 439
                   R VKMHDL+RDMAI I +E  Q ++
Sbjct: 549 LYSGRRCVRAVKMHDLIRDMAIQILQENSQGMV 581


>gb|ABF81424.1| NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1183

 Score =  154 bits (390), Expect = 5e-36
 Identities = 80/153 (52%), Positives = 103/153 (67%), Gaps = 7/153 (4%)
 Frame = +2

Query: 2   GLPLAIITVGWAMRKVNNIRVWRNALEELKNSRAEIEGMEEDVFARLKFSYNHLKNDRIQ 181
           GLPL I T+   MR V++I  WRNALEELK SR  +E M+E+VF  L+FSY HLK   +Q
Sbjct: 509 GLPLGIKTMAGTMRGVDDICEWRNALEELKQSRVRLEDMDEEVFQILRFSYMHLKESALQ 568

Query: 182 SCLLYCALYPEDYKIDIEDLVEYWMAEGLIDEVGDREKEIDKGHTILNELKDACMLESIG 361
            C L+CAL+PED+ I  EDL+ Y + EG+I  +  RE E DKGHT+LN+L+ AC+LE   
Sbjct: 569 QCFLHCALFPEDFMIPREDLIAYLIDEGVIKGLTRREAEFDKGHTMLNKLESACLLEDAK 628

Query: 362 -------ARWVKMHDLVRDMAISITREPPQFII 439
                   R VKMHDL+RDMAI I +E  Q ++
Sbjct: 629 LYSGRRCVRAVKMHDLIRDMAIQILQENSQGMV 661