BLASTX nr result

ID: Coptis24_contig00027912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027912
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283875.1| PREDICTED: uncharacterized protein LOC100246...   169   2e-40
ref|XP_002521222.1| conserved hypothetical protein [Ricinus comm...   163   1e-38
ref|XP_002305164.1| predicted protein [Populus trichocarpa] gi|2...   163   1e-38
gb|ADH82117.1| neoxanthin synthase [Citrus sinensis]                  161   5e-38
ref|XP_004156914.1| PREDICTED: uncharacterized LOC101204234 isof...   157   1e-36

>ref|XP_002283875.1| PREDICTED: uncharacterized protein LOC100246370 [Vitis vinifera]
           gi|296087274|emb|CBI33648.3| unnamed protein product
           [Vitis vinifera]
          Length = 246

 Score =  169 bits (428), Expect = 2e-40
 Identities = 78/91 (85%), Positives = 87/91 (95%)
 Frame = +1

Query: 34  SWAPDTLQMMFASKYWLPELPGIAKMFSHEMTMASAWIHLLAVDLFAARQVFRDGLANNI 213
           SW PDT+++MFASKYWLPELPG+AKMFS+EMT+ASAWIHLLA+DLFAARQVF+DGL N I
Sbjct: 150 SWTPDTIRLMFASKYWLPELPGMAKMFSNEMTLASAWIHLLAIDLFAARQVFQDGLENKI 209

Query: 214 ETRHSVSLCLLFCPIGIVTHVITKALTKTVG 306
           ETRHSVSLCLLFCPIGIVTHVITKALTK+ G
Sbjct: 210 ETRHSVSLCLLFCPIGIVTHVITKALTKSAG 240


>ref|XP_002521222.1| conserved hypothetical protein [Ricinus communis]
           gi|223539587|gb|EEF41174.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 246

 Score =  163 bits (413), Expect = 1e-38
 Identities = 76/92 (82%), Positives = 85/92 (92%)
 Frame = +1

Query: 34  SWAPDTLQMMFASKYWLPELPGIAKMFSHEMTMASAWIHLLAVDLFAARQVFRDGLANNI 213
           SW PDT+++MFAS+YWLPELPGIAKMFS EMT+ASAWIHLLAVDLFAARQVF DGL N I
Sbjct: 150 SWTPDTVRLMFASQYWLPELPGIAKMFSSEMTLASAWIHLLAVDLFAARQVFHDGLENEI 209

Query: 214 ETRHSVSLCLLFCPIGIVTHVITKALTKTVGS 309
           ETRHSVSLCLLFCPIGIV+HV+TKALT++  S
Sbjct: 210 ETRHSVSLCLLFCPIGIVSHVLTKALTRSAAS 241


>ref|XP_002305164.1| predicted protein [Populus trichocarpa] gi|222848128|gb|EEE85675.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score =  163 bits (413), Expect = 1e-38
 Identities = 76/92 (82%), Positives = 84/92 (91%)
 Frame = +1

Query: 34  SWAPDTLQMMFASKYWLPELPGIAKMFSHEMTMASAWIHLLAVDLFAARQVFRDGLANNI 213
           SW PDT+++MFAS+YWLPELPGIAKMFS+EMT+ASAWIHLLAVDLFAARQVF DGL N +
Sbjct: 150 SWTPDTMRLMFASQYWLPELPGIAKMFSNEMTLASAWIHLLAVDLFAARQVFNDGLENEV 209

Query: 214 ETRHSVSLCLLFCPIGIVTHVITKALTKTVGS 309
           ETRHSVSLCLLFCPIGI TH ITKALTK  G+
Sbjct: 210 ETRHSVSLCLLFCPIGIATHCITKALTKGSGT 241


>gb|ADH82117.1| neoxanthin synthase [Citrus sinensis]
          Length = 248

 Score =  161 bits (408), Expect = 5e-38
 Identities = 76/89 (85%), Positives = 83/89 (93%)
 Frame = +1

Query: 34  SWAPDTLQMMFASKYWLPELPGIAKMFSHEMTMASAWIHLLAVDLFAARQVFRDGLANNI 213
           SW PDTL++MFASKYWLPELPGIAKMFS E+T+ASAWIHLLAVDLFAA  VF+DGL N I
Sbjct: 159 SWTPDTLRLMFASKYWLPELPGIAKMFSSEITLASAWIHLLAVDLFAASHVFQDGLQNQI 218

Query: 214 ETRHSVSLCLLFCPIGIVTHVITKALTKT 300
           ETRHSVSLCLLFCPIGI+THVITKALTK+
Sbjct: 219 ETRHSVSLCLLFCPIGILTHVITKALTKS 247


>ref|XP_004156914.1| PREDICTED: uncharacterized LOC101204234 isoform 1 [Cucumis sativus]
           gi|449484557|ref|XP_004156915.1| PREDICTED:
           uncharacterized LOC101204234 isoform 2 [Cucumis sativus]
          Length = 243

 Score =  157 bits (396), Expect = 1e-36
 Identities = 72/91 (79%), Positives = 80/91 (87%)
 Frame = +1

Query: 34  SWAPDTLQMMFASKYWLPELPGIAKMFSHEMTMASAWIHLLAVDLFAARQVFRDGLANNI 213
           SW P+T+Q++FASKYWLPELPGI KMFS EMT+ASAWIHLL VDLFAARQVF DG+ N I
Sbjct: 147 SWTPETMQLIFASKYWLPELPGILKMFSSEMTLASAWIHLLVVDLFAARQVFHDGVENKI 206

Query: 214 ETRHSVSLCLLFCPIGIVTHVITKALTKTVG 306
           ETRHSVSLCL FCPIG++ HVITKALT  VG
Sbjct: 207 ETRHSVSLCLFFCPIGVLIHVITKALTNRVG 237


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