BLASTX nr result
ID: Coptis24_contig00027892
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00027892 (466 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002329728.1| predicted protein [Populus trichocarpa] gi|2... 150 8e-35 ref|XP_002264379.2| PREDICTED: UPF0176 protein pc0378-like [Viti... 143 1e-32 ref|XP_002892970.1| predicted protein [Arabidopsis lyrata subsp.... 137 1e-30 ref|XP_003532550.1| PREDICTED: LOW QUALITY PROTEIN: UPF0176 prot... 133 1e-29 gb|AAF97265.1|AC034106_8 Contains a Rhodanese-like PF|00581 doma... 133 2e-29 >ref|XP_002329728.1| predicted protein [Populus trichocarpa] gi|222870636|gb|EEF07767.1| predicted protein [Populus trichocarpa] Length = 460 Score = 150 bits (380), Expect = 8e-35 Identities = 74/109 (67%), Positives = 86/109 (78%) Frame = +3 Query: 138 CYSFPPSSTKRAYXXXXXXXXXFIVVNFYRFVFIQDPHDLVSTHLSFLKGLDIRGRIYLN 317 C + P SST FIVVNFYRFVFI DPH+ V+ HLSFLKGLDI GRIY+N Sbjct: 74 CATIPSSST------VANPSNDFIVVNFYRFVFINDPHEEVAKHLSFLKGLDIHGRIYVN 127 Query: 318 EQGINAQFSGPSVDALMYLEWIKEDSRFSDILVQISPSVNGHSFPRLKL 464 EQGINAQ+SGPS DAL Y+EW++ED RFSDILVQISP++NGH+FP+LKL Sbjct: 128 EQGINAQYSGPSKDALAYVEWLREDFRFSDILVQISPALNGHAFPKLKL 176 >ref|XP_002264379.2| PREDICTED: UPF0176 protein pc0378-like [Vitis vinifera] Length = 441 Score = 143 bits (361), Expect = 1e-32 Identities = 67/87 (77%), Positives = 77/87 (88%) Frame = +3 Query: 204 FIVVNFYRFVFIQDPHDLVSTHLSFLKGLDIRGRIYLNEQGINAQFSGPSVDALMYLEWI 383 FIVVNFYRFVFIQDP VS HLSFL+G DI GR+Y+NEQGINAQ+SGPS DAL Y+EW+ Sbjct: 85 FIVVNFYRFVFIQDPELEVSKHLSFLQGFDIHGRVYINEQGINAQYSGPSKDALAYVEWL 144 Query: 384 KEDSRFSDILVQISPSVNGHSFPRLKL 464 +ED RFSDILVQISP+ NGH+FP+LKL Sbjct: 145 REDHRFSDILVQISPASNGHAFPKLKL 171 >ref|XP_002892970.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297338812|gb|EFH69229.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 448 Score = 137 bits (344), Expect = 1e-30 Identities = 63/87 (72%), Positives = 76/87 (87%) Frame = +3 Query: 204 FIVVNFYRFVFIQDPHDLVSTHLSFLKGLDIRGRIYLNEQGINAQFSGPSVDALMYLEWI 383 FIVVNF+RFV I DP ++ HLSFLK L+IRGRIYLNEQGINAQ+SGPS DAL Y+EW+ Sbjct: 82 FIVVNFFRFVSIGDPEAVIEKHLSFLKDLNIRGRIYLNEQGINAQYSGPSKDALAYVEWL 141 Query: 384 KEDSRFSDILVQISPSVNGHSFPRLKL 464 K D RFSD+LVQ+SP++NGH+FP+LKL Sbjct: 142 KGDERFSDLLVQMSPAINGHAFPKLKL 168 >ref|XP_003532550.1| PREDICTED: LOW QUALITY PROTEIN: UPF0176 protein pc0378-like [Glycine max] Length = 436 Score = 133 bits (335), Expect = 1e-29 Identities = 70/134 (52%), Positives = 89/134 (66%), Gaps = 2/134 (1%) Frame = +3 Query: 69 RPIFRIHTRGSKIFPTCLFKTSVCYSFPPSSTKRAYXXXXXXXXXFIVVNFYRFVFIQDP 248 RP+F+ S C S PSS+++ + F+VVNFY FVFIQDP Sbjct: 40 RPLFKFSNFSSLALTHCKLVPSALPLTQPSSSRKDFD--------FVVVNFYHFVFIQDP 91 Query: 249 HDLVSTHLSFLK--GLDIRGRIYLNEQGINAQFSGPSVDALMYLEWIKEDSRFSDILVQI 422 V+ H SFL+ GLDI GR+YLNEQGINAQ+SGPS DA+ Y+ W+++D+RFS+ILVQI Sbjct: 92 QAEVAKHRSFLELEGLDINGRVYLNEQGINAQYSGPSKDAMAYVNWLRKDNRFSNILVQI 151 Query: 423 SPSVNGHSFPRLKL 464 SPS GH+FP LKL Sbjct: 152 SPSEKGHTFPILKL 165 >gb|AAF97265.1|AC034106_8 Contains a Rhodanese-like PF|00581 domain. ESTs gb|T45773, gb|AA394520 come from this gene [Arabidopsis thaliana] Length = 423 Score = 133 bits (334), Expect = 2e-29 Identities = 63/87 (72%), Positives = 74/87 (85%) Frame = +3 Query: 204 FIVVNFYRFVFIQDPHDLVSTHLSFLKGLDIRGRIYLNEQGINAQFSGPSVDALMYLEWI 383 FIVVNFYRFV I DP + HLSFLK L+IRGRIYLNEQGINAQ+SGPS DAL Y+EW+ Sbjct: 83 FIVVNFYRFVSIGDPEAEIEKHLSFLKDLNIRGRIYLNEQGINAQYSGPSKDALAYVEWL 142 Query: 384 KEDSRFSDILVQISPSVNGHSFPRLKL 464 K D RFSD+LVQ+SP++N H+FP+LKL Sbjct: 143 KGDDRFSDLLVQMSPAMNRHAFPKLKL 169