BLASTX nr result

ID: Coptis24_contig00027890 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027890
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74759.1| hypothetical protein VITISV_011400 [Vitis vinifera]    59   3e-07
emb|CAN81751.1| hypothetical protein VITISV_026939 [Vitis vinifera]    57   1e-06
emb|CAN67513.1| hypothetical protein VITISV_017664 [Vitis vinifera]    57   1e-06
emb|CAN80288.1| hypothetical protein VITISV_006820 [Vitis vinifera]    57   2e-06
emb|CAN81370.1| hypothetical protein VITISV_021414 [Vitis vinifera]    56   3e-06

>emb|CAN74759.1| hypothetical protein VITISV_011400 [Vitis vinifera]
          Length = 1540

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/87 (33%), Positives = 52/87 (59%)
 Frame = -3

Query: 280  ANARRRVNSIDRLVIGNDEVSDVTTIRDHIVEFYEALYSEDPLVRPEMDGMEFIRVSEKQ 101
            ANA RR NS+DR+ I  + +++   +RD IV  ++ L SE+P  R +++G++  +++ ++
Sbjct: 950  ANAHRRNNSLDRITINGEPLTEDQEVRDGIVNAFQKLLSEEPGWRADIEGLQLKQLNSRE 1009

Query: 100  SAGIEVAIDETEIWLQLMNWVGRELQG 20
            +  +EV   E EI   LM   G +  G
Sbjct: 1010 AEDLEVPFSEEEIHFALMEMRGDKAPG 1036


>emb|CAN81751.1| hypothetical protein VITISV_026939 [Vitis vinifera]
          Length = 1653

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/87 (32%), Positives = 52/87 (59%)
 Frame = -3

Query: 280  ANARRRVNSIDRLVIGNDEVSDVTTIRDHIVEFYEALYSEDPLVRPEMDGMEFIRVSEKQ 101
            ANA RR NS+DR+ I  + +++   +R+ IV  ++ L SE+P  R +++G++  +++ ++
Sbjct: 983  ANAHRRNNSLDRITINGEMLTEDQEVREGIVNAFQNLLSEEPGWRADIEGLQLKQLNSRE 1042

Query: 100  SAGIEVAIDETEIWLQLMNWVGRELQG 20
            +  +EV   E EI   LM   G +  G
Sbjct: 1043 AENLEVPFSEEEIHFALMEMRGDKAPG 1069


>emb|CAN67513.1| hypothetical protein VITISV_017664 [Vitis vinifera]
          Length = 844

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/87 (34%), Positives = 53/87 (60%)
 Frame = -3

Query: 280 ANARRRVNSIDRLVIGNDEVSDVTTIRDHIVEFYEALYSEDPLVRPEMDGMEFIRVSEKQ 101
           ANA RR NS+DR++I  + +++   +RD IV  ++ L SE+   R +++G++F ++S ++
Sbjct: 288 ANAHRRNNSMDRIMINGELLTEDQEVRDGIVNEFQKLLSEEQGWRADIEGLQFKQLSSRE 347

Query: 100 SAGIEVAIDETEIWLQLMNWVGRELQG 20
           + G+EV     EI   LM   G +  G
Sbjct: 348 ANGLEVPFSVEEIHSALMEMGGDKTPG 374


>emb|CAN80288.1| hypothetical protein VITISV_006820 [Vitis vinifera]
          Length = 1894

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/87 (32%), Positives = 52/87 (59%)
 Frame = -3

Query: 280  ANARRRVNSIDRLVIGNDEVSDVTTIRDHIVEFYEALYSEDPLVRPEMDGMEFIRVSEKQ 101
            ANA RR NS+DR+ I  + +++   +R+ IV  ++ L SE+P  R +++G++  +++ ++
Sbjct: 1114 ANAHRRNNSLDRITINGELLTEDQEVREGIVNAFQNLLSEEPGWRTDIEGLQLKQLNSRE 1173

Query: 100  SAGIEVAIDETEIWLQLMNWVGRELQG 20
            +  +EV   E EI   LM   G +  G
Sbjct: 1174 AENLEVPFSEEEIHFALMEMRGDKAPG 1200


>emb|CAN81370.1| hypothetical protein VITISV_021414 [Vitis vinifera]
          Length = 1110

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 28/87 (32%), Positives = 51/87 (58%)
 Frame = -3

Query: 280  ANARRRVNSIDRLVIGNDEVSDVTTIRDHIVEFYEALYSEDPLVRPEMDGMEFIRVSEKQ 101
            ANA RR NS+DR++I  + +++   +RD IV  ++ L SE+P  R +++G+   +++ ++
Sbjct: 958  ANAHRRNNSLDRIMINGELLTEEQEVRDGIVNAFQKLLSEEPGWRADIEGLXLNQLNSRE 1017

Query: 100  SAGIEVAIDETEIWLQLMNWVGRELQG 20
            +  +E    E EI   LM   G +  G
Sbjct: 1018 AEDLEXPFXEEEIHFALMEMRGDKAPG 1044


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