BLASTX nr result
ID: Coptis24_contig00027863
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00027863
(399 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284885.1| PREDICTED: ABC transporter G family member 3... 236 1e-60
ref|XP_003549791.1| PREDICTED: ABC transporter G family member 3... 236 2e-60
ref|XP_002324959.1| predicted protein [Populus trichocarpa] gi|2... 235 3e-60
ref|XP_003524521.1| PREDICTED: ABC transporter G family member 3... 234 4e-60
ref|XP_002515560.1| ATP-binding cassette transporter, putative [... 234 4e-60
>ref|XP_002284885.1| PREDICTED: ABC transporter G family member 32 [Vitis vinifera]
gi|297738886|emb|CBI28131.3| unnamed protein product
[Vitis vinifera]
Length = 1421
Score = 236 bits (603), Expect = 1e-60
Identities = 115/132 (87%), Positives = 124/132 (93%)
Frame = -2
Query: 398 LPFQPLSMSFSNINYYVDVPMELKQQGIIEDRLQLLVNVTGAFKPGVLTALVGVSGAGKT 219
LPFQPLSM F NINY+VDVP+ELKQQGI+EDRLQLLVNVTGAF+PGVLTALVGVSGAGKT
Sbjct: 812 LPFQPLSMCFKNINYFVDVPLELKQQGIVEDRLQLLVNVTGAFRPGVLTALVGVSGAGKT 871
Query: 218 TLMDVLAGRKTGGHIEGSIYISGYPKNQETFARISGYCEQNDVHSPCLTVRESLLYSTWL 39
TLMDVLAGRKTGG IEGSI+ISGYPK QETFARISGYCEQ+D+HSPCLTV ESLL+S WL
Sbjct: 872 TLMDVLAGRKTGGVIEGSIHISGYPKKQETFARISGYCEQSDIHSPCLTVLESLLFSAWL 931
Query: 38 RLPSHVDSETQK 3
RLPS VD ETQ+
Sbjct: 932 RLPSDVDLETQR 943
Score = 55.5 bits (132), Expect = 5e-06
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Frame = -2
Query: 314 IEDRLQLLVNVTGAFKPGVLTALVGVSGAGKTTLMDVLAGRKTGG-HIEGSIYISGYPKN 138
++ +L +L +++G +P LT L+G +GKTTL+ LAGR + G I +G+ N
Sbjct: 144 MQKKLTILDDISGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGSDLKVSGRITYNGHNLN 203
Query: 137 QETFARISGYCEQNDVHSPCLTVRESLLYS 48
+ R S Y Q D H +TVRE+L +S
Sbjct: 204 EFVPQRTSAYVSQYDWHVAEMTVRETLEFS 233
>ref|XP_003549791.1| PREDICTED: ABC transporter G family member 32-like isoform 1 [Glycine
max]
Length = 1418
Score = 236 bits (601), Expect = 2e-60
Identities = 115/132 (87%), Positives = 124/132 (93%)
Frame = -2
Query: 398 LPFQPLSMSFSNINYYVDVPMELKQQGIIEDRLQLLVNVTGAFKPGVLTALVGVSGAGKT 219
LPFQPLSM+FSNINYYVDVP+ELKQQGI+ED+LQLLVNVTGAF+PGVLTALVGVSGAGKT
Sbjct: 810 LPFQPLSMAFSNINYYVDVPLELKQQGIVEDKLQLLVNVTGAFRPGVLTALVGVSGAGKT 869
Query: 218 TLMDVLAGRKTGGHIEGSIYISGYPKNQETFARISGYCEQNDVHSPCLTVRESLLYSTWL 39
TLMDVLAGRKTGG IEGS+YISGYPK Q++FARISGYCEQ DVHSPCLTV ESLL+S WL
Sbjct: 870 TLMDVLAGRKTGGVIEGSVYISGYPKRQDSFARISGYCEQTDVHSPCLTVWESLLFSAWL 929
Query: 38 RLPSHVDSETQK 3
RL S VD ETQK
Sbjct: 930 RLSSDVDFETQK 941
Score = 57.4 bits (137), Expect = 1e-06
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Frame = -2
Query: 305 RLQLLVNVTGAFKPGVLTALVGVSGAGKTTLMDVLAGRKTGG-HIEGSIYISGYPKNQET 129
+L +L +++G KP LT L+G +GKTTL+ LAGR G + G+I +G+ +
Sbjct: 147 KLTILADISGIIKPSRLTLLLGPPSSGKTTLLLALAGRLGPGLQMSGNITYNGHSLKEFV 206
Query: 128 FARISGYCEQNDVHSPCLTVRESLLYS 48
R S Y Q D H +TVRE+L ++
Sbjct: 207 PQRTSAYVSQQDRHVAEMTVRETLQFA 233
>ref|XP_002324959.1| predicted protein [Populus trichocarpa] gi|222866393|gb|EEF03524.1|
predicted protein [Populus trichocarpa]
Length = 1420
Score = 235 bits (599), Expect = 3e-60
Identities = 113/132 (85%), Positives = 126/132 (95%)
Frame = -2
Query: 398 LPFQPLSMSFSNINYYVDVPMELKQQGIIEDRLQLLVNVTGAFKPGVLTALVGVSGAGKT 219
LPFQPLSMSFSNINY+VDVP+ELKQQGI+EDRLQLLVNVTGAF+PGVLTALVGVSGAGKT
Sbjct: 811 LPFQPLSMSFSNINYFVDVPVELKQQGIVEDRLQLLVNVTGAFRPGVLTALVGVSGAGKT 870
Query: 218 TLMDVLAGRKTGGHIEGSIYISGYPKNQETFARISGYCEQNDVHSPCLTVRESLLYSTWL 39
TLMDVLAGRKTGG IEG+I+ISGYPK QETFAR+SGYCEQND+HSPCLTV ESLL+S WL
Sbjct: 871 TLMDVLAGRKTGGIIEGNIHISGYPKKQETFARVSGYCEQNDIHSPCLTVLESLLFSAWL 930
Query: 38 RLPSHVDSETQK 3
RLP+ V+ +TQ+
Sbjct: 931 RLPTVVNMDTQQ 942
Score = 55.1 bits (131), Expect = 6e-06
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Frame = -2
Query: 305 RLQLLVNVTGAFKPGVLTALVGVSGAGKTTLMDVLAGRKTGG-HIEGSIYISGYPKNQET 129
+L +L +V+G +P LT L+G +GKTTL+ LAGR + G I +G+ N+
Sbjct: 147 KLTILDDVSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGNDLQMSGKITYNGHSLNEFV 206
Query: 128 FARISGYCEQNDVHSPCLTVRESLLYS 48
R S Y Q+D H +TV+E+L ++
Sbjct: 207 APRTSAYVSQHDWHVAEMTVKETLEFA 233
>ref|XP_003524521.1| PREDICTED: ABC transporter G family member 32-like isoform 1 [Glycine
max]
Length = 1418
Score = 234 bits (598), Expect = 4e-60
Identities = 114/132 (86%), Positives = 124/132 (93%)
Frame = -2
Query: 398 LPFQPLSMSFSNINYYVDVPMELKQQGIIEDRLQLLVNVTGAFKPGVLTALVGVSGAGKT 219
LPFQPL+M+FSNINYYVDVP+ELKQQGI+ED+LQLLVNVTGAF+PGVLTALVGVSGAGKT
Sbjct: 810 LPFQPLAMAFSNINYYVDVPLELKQQGIVEDKLQLLVNVTGAFRPGVLTALVGVSGAGKT 869
Query: 218 TLMDVLAGRKTGGHIEGSIYISGYPKNQETFARISGYCEQNDVHSPCLTVRESLLYSTWL 39
TLMDVLAGRKTGG IEGS+YISGYPK Q++FARISGYCEQ DVHSPCLTV ESLL+S WL
Sbjct: 870 TLMDVLAGRKTGGVIEGSVYISGYPKRQDSFARISGYCEQTDVHSPCLTVWESLLFSAWL 929
Query: 38 RLPSHVDSETQK 3
RL S VD ETQK
Sbjct: 930 RLSSDVDLETQK 941
Score = 55.8 bits (133), Expect = 4e-06
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = -2
Query: 305 RLQLLVNVTGAFKPGVLTALVGVSGAGKTTLMDVLAGRKTGG-HIEGSIYISGYPKNQET 129
+L +L +++G +P LT L+G +GKTTL+ LAGR G + G I +G+ +
Sbjct: 147 KLTILADISGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGPGLQMSGDITYNGHSLKEFV 206
Query: 128 FARISGYCEQNDVHSPCLTVRESLLYS 48
R S Y Q D H +TVRE+L ++
Sbjct: 207 PQRTSAYVSQQDWHVAEMTVRETLQFA 233
>ref|XP_002515560.1| ATP-binding cassette transporter, putative [Ricinus communis]
gi|223545504|gb|EEF47009.1| ATP-binding cassette
transporter, putative [Ricinus communis]
Length = 1235
Score = 234 bits (598), Expect = 4e-60
Identities = 114/132 (86%), Positives = 125/132 (94%)
Frame = -2
Query: 398 LPFQPLSMSFSNINYYVDVPMELKQQGIIEDRLQLLVNVTGAFKPGVLTALVGVSGAGKT 219
LPFQPLSMSFSNINY+VDVP+ELKQQGI+E++LQLLVNVTGAF+PGVLTALVGVSGAGKT
Sbjct: 792 LPFQPLSMSFSNINYFVDVPLELKQQGIVEEKLQLLVNVTGAFRPGVLTALVGVSGAGKT 851
Query: 218 TLMDVLAGRKTGGHIEGSIYISGYPKNQETFARISGYCEQNDVHSPCLTVRESLLYSTWL 39
TLMDVLAGRKTGG IEG+IYISGYPK QETFARISGYCEQND+HSP LT+ ESLL+S WL
Sbjct: 852 TLMDVLAGRKTGGVIEGNIYISGYPKRQETFARISGYCEQNDIHSPGLTLLESLLFSAWL 911
Query: 38 RLPSHVDSETQK 3
RLPS VD ETQ+
Sbjct: 912 RLPSEVDMETQQ 923
Score = 57.0 bits (136), Expect = 2e-06
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Frame = -2
Query: 305 RLQLLVNVTGAFKPGVLTALVGVSGAGKTTLMDVLAGRKTGGH---IEGSIYISGYPKNQ 135
+L +L +V+G +P LT L+G +GKTTL+ LAGR GH + G I +G+ N+
Sbjct: 147 KLTILDDVSGIIRPSRLTLLLGPPSSGKTTLLLALAGRL--GHDLKVSGKITYNGHRVNE 204
Query: 134 ETFARISGYCEQNDVHSPCLTVRESLLYS 48
R S Y Q D H +TVRE+L ++
Sbjct: 205 FVAPRTSAYVSQQDWHVAEMTVRETLEFA 233