BLASTX nr result

ID: Coptis24_contig00027862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027862
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAH67874.1| OSIGBa0153E02-OSIGBa0093I20.3 [Oryza sativa Indi...    83   2e-14
emb|CAE05707.2| OSJNBb0065J09.3 [Oryza sativa Japonica Group]          83   2e-14
gb|AAO20078.1| putative polyprotein [Oryza sativa Japonica Group]      81   8e-14
emb|CAH66946.1| B0809H07.1 [Oryza sativa Indica Group]                 81   8e-14
emb|CAN68477.1| hypothetical protein VITISV_029627 [Vitis vinifera]    81   1e-13

>emb|CAH67874.1| OSIGBa0153E02-OSIGBa0093I20.3 [Oryza sativa Indica Group]
          Length = 806

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 42/76 (55%), Positives = 52/76 (68%)
 Frame = -3

Query: 283 PIELNHKLCDDKGEPIVYIGWFQ*LVGNYIYLSFNRPDTTYAVSVIRQFMHTPRTTQLDA 104
           PIE NHKLC + G+P V    +Q LVG  IYL   RPD TYAVSV+ ++MH PR+  +DA
Sbjct: 564 PIEQNHKLCAELGDP-VNKERYQRLVGRLIYLCHTRPDITYAVSVVSRYMHDPRSGHMDA 622

Query: 103 SLHVLCYVKGCPGKGL 56
              +L Y+KG PGKGL
Sbjct: 623 VYRILRYLKGSPGKGL 638


>emb|CAE05707.2| OSJNBb0065J09.3 [Oryza sativa Japonica Group]
          Length = 1015

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 42/76 (55%), Positives = 52/76 (68%)
 Frame = -3

Query: 283 PIELNHKLCDDKGEPIVYIGWFQ*LVGNYIYLSFNRPDTTYAVSVIRQFMHTPRTTQLDA 104
           PIE NHKLC + G+P V    +Q LVG  IYL   RPD TYAVSV+ ++MH PR+  +DA
Sbjct: 755 PIEQNHKLCAELGDP-VNKERYQRLVGRLIYLCHTRPDITYAVSVVSRYMHDPRSGHMDA 813

Query: 103 SLHVLCYVKGCPGKGL 56
              +L Y+KG PGKGL
Sbjct: 814 VYRILRYLKGSPGKGL 829


>gb|AAO20078.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1299

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 39/76 (51%), Positives = 53/76 (69%)
 Frame = -3

Query: 283  PIELNHKLCDDKGEPIVYIGWFQ*LVGNYIYLSFNRPDTTYAVSVIRQFMHTPRTTQLDA 104
            PI+ NHKLC + G+P V    +Q LVG  IYL   RPD TYAVS++ ++MH PR++ ++A
Sbjct: 1057 PIDQNHKLCAESGDP-VNRERYQRLVGRLIYLCHTRPDITYAVSMVSRYMHDPRSSHMEA 1115

Query: 103  SLHVLCYVKGCPGKGL 56
               +L Y+KG PGKGL
Sbjct: 1116 VYRILRYLKGSPGKGL 1131


>emb|CAH66946.1| B0809H07.1 [Oryza sativa Indica Group]
          Length = 1120

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 39/76 (51%), Positives = 53/76 (69%)
 Frame = -3

Query: 283  PIELNHKLCDDKGEPIVYIGWFQ*LVGNYIYLSFNRPDTTYAVSVIRQFMHTPRTTQLDA 104
            PI+ NHKLC + G+P V    +Q LVG  IYL   RPD TYAVS++ ++MH PR++ ++A
Sbjct: 878  PIDQNHKLCAESGDP-VNRERYQRLVGRLIYLCHTRPDITYAVSMVSRYMHDPRSSHMEA 936

Query: 103  SLHVLCYVKGCPGKGL 56
               +L Y+KG PGKGL
Sbjct: 937  VYRILRYLKGSPGKGL 952


>emb|CAN68477.1| hypothetical protein VITISV_029627 [Vitis vinifera]
          Length = 659

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/77 (53%), Positives = 52/77 (67%)
 Frame = -3

Query: 283 PIELNHKLCDDKGEPIVYIGWFQ*LVGNYIYLSFNRPDTTYAVSVIRQFMHTPRTTQLDA 104
           P++ NHKL + K EP+V    +Q LVG  IYL+  RP+  Y+VSVI QFMH PR   L A
Sbjct: 416 PMDPNHKLGEVKEEPVVDKRMYQRLVGRLIYLAHTRPNIVYSVSVISQFMHDPREPHLQA 475

Query: 103 SLHVLCYVKGCPGKGLL 53
           +  VL Y+KG PGKG+L
Sbjct: 476 TYRVLHYLKGNPGKGIL 492


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