BLASTX nr result
ID: Coptis24_contig00027862
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00027862 (342 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAH67874.1| OSIGBa0153E02-OSIGBa0093I20.3 [Oryza sativa Indi... 83 2e-14 emb|CAE05707.2| OSJNBb0065J09.3 [Oryza sativa Japonica Group] 83 2e-14 gb|AAO20078.1| putative polyprotein [Oryza sativa Japonica Group] 81 8e-14 emb|CAH66946.1| B0809H07.1 [Oryza sativa Indica Group] 81 8e-14 emb|CAN68477.1| hypothetical protein VITISV_029627 [Vitis vinifera] 81 1e-13 >emb|CAH67874.1| OSIGBa0153E02-OSIGBa0093I20.3 [Oryza sativa Indica Group] Length = 806 Score = 83.2 bits (204), Expect = 2e-14 Identities = 42/76 (55%), Positives = 52/76 (68%) Frame = -3 Query: 283 PIELNHKLCDDKGEPIVYIGWFQ*LVGNYIYLSFNRPDTTYAVSVIRQFMHTPRTTQLDA 104 PIE NHKLC + G+P V +Q LVG IYL RPD TYAVSV+ ++MH PR+ +DA Sbjct: 564 PIEQNHKLCAELGDP-VNKERYQRLVGRLIYLCHTRPDITYAVSVVSRYMHDPRSGHMDA 622 Query: 103 SLHVLCYVKGCPGKGL 56 +L Y+KG PGKGL Sbjct: 623 VYRILRYLKGSPGKGL 638 >emb|CAE05707.2| OSJNBb0065J09.3 [Oryza sativa Japonica Group] Length = 1015 Score = 83.2 bits (204), Expect = 2e-14 Identities = 42/76 (55%), Positives = 52/76 (68%) Frame = -3 Query: 283 PIELNHKLCDDKGEPIVYIGWFQ*LVGNYIYLSFNRPDTTYAVSVIRQFMHTPRTTQLDA 104 PIE NHKLC + G+P V +Q LVG IYL RPD TYAVSV+ ++MH PR+ +DA Sbjct: 755 PIEQNHKLCAELGDP-VNKERYQRLVGRLIYLCHTRPDITYAVSVVSRYMHDPRSGHMDA 813 Query: 103 SLHVLCYVKGCPGKGL 56 +L Y+KG PGKGL Sbjct: 814 VYRILRYLKGSPGKGL 829 >gb|AAO20078.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1299 Score = 81.3 bits (199), Expect = 8e-14 Identities = 39/76 (51%), Positives = 53/76 (69%) Frame = -3 Query: 283 PIELNHKLCDDKGEPIVYIGWFQ*LVGNYIYLSFNRPDTTYAVSVIRQFMHTPRTTQLDA 104 PI+ NHKLC + G+P V +Q LVG IYL RPD TYAVS++ ++MH PR++ ++A Sbjct: 1057 PIDQNHKLCAESGDP-VNRERYQRLVGRLIYLCHTRPDITYAVSMVSRYMHDPRSSHMEA 1115 Query: 103 SLHVLCYVKGCPGKGL 56 +L Y+KG PGKGL Sbjct: 1116 VYRILRYLKGSPGKGL 1131 >emb|CAH66946.1| B0809H07.1 [Oryza sativa Indica Group] Length = 1120 Score = 81.3 bits (199), Expect = 8e-14 Identities = 39/76 (51%), Positives = 53/76 (69%) Frame = -3 Query: 283 PIELNHKLCDDKGEPIVYIGWFQ*LVGNYIYLSFNRPDTTYAVSVIRQFMHTPRTTQLDA 104 PI+ NHKLC + G+P V +Q LVG IYL RPD TYAVS++ ++MH PR++ ++A Sbjct: 878 PIDQNHKLCAESGDP-VNRERYQRLVGRLIYLCHTRPDITYAVSMVSRYMHDPRSSHMEA 936 Query: 103 SLHVLCYVKGCPGKGL 56 +L Y+KG PGKGL Sbjct: 937 VYRILRYLKGSPGKGL 952 >emb|CAN68477.1| hypothetical protein VITISV_029627 [Vitis vinifera] Length = 659 Score = 80.9 bits (198), Expect = 1e-13 Identities = 41/77 (53%), Positives = 52/77 (67%) Frame = -3 Query: 283 PIELNHKLCDDKGEPIVYIGWFQ*LVGNYIYLSFNRPDTTYAVSVIRQFMHTPRTTQLDA 104 P++ NHKL + K EP+V +Q LVG IYL+ RP+ Y+VSVI QFMH PR L A Sbjct: 416 PMDPNHKLGEVKEEPVVDKRMYQRLVGRLIYLAHTRPNIVYSVSVISQFMHDPREPHLQA 475 Query: 103 SLHVLCYVKGCPGKGLL 53 + VL Y+KG PGKG+L Sbjct: 476 TYRVLHYLKGNPGKGIL 492