BLASTX nr result

ID: Coptis24_contig00027852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027852
         (882 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282879.1| PREDICTED: probable plastid-lipid-associated...   305   9e-81
ref|XP_004138759.1| PREDICTED: probable plastid-lipid-associated...   302   8e-80
gb|AEO33076.1| hypothetical protein [Amblyomma maculatum]             300   4e-79
gb|AEQ20879.1| plastid lipid-associated protein, partial [Eriobo...   297   2e-78
ref|XP_002527973.1| structural molecule, putative [Ricinus commu...   291   1e-76

>ref|XP_002282879.1| PREDICTED: probable plastid-lipid-associated protein 8,
           chloroplastic [Vitis vinifera]
           gi|296081777|emb|CBI20782.3| unnamed protein product
           [Vitis vinifera]
          Length = 238

 Score =  305 bits (781), Expect = 9e-81
 Identities = 155/215 (72%), Positives = 177/215 (82%)
 Frame = -2

Query: 881 SNSSLHLSFPIKSHLQSQRKRNVRNISRISATVSTQDEVRTSPDDLVSTILSKVTGTDRG 702
           SNS L +S P    L  +R +N R  + IS T     EVRT PDDLV++ILSKV  TDRG
Sbjct: 26  SNSPLIVSIP----LHRRRHKNGRVFASISVT---SPEVRTGPDDLVASILSKVAQTDRG 78

Query: 701 VSLPTEGHKEVDEVAAKLQKYCVDKPVECPLIFGEWDVVYCSVPTSPGGGYRSALGRVVF 522
           V L  + HKEV EVA +LQKYCV +PV+CPLIFGEWDVVYCS PTSPGGGYR+A GR+ F
Sbjct: 79  VLLTKDKHKEVAEVAQELQKYCVTEPVKCPLIFGEWDVVYCSNPTSPGGGYRNAFGRLFF 138

Query: 521 KTKEMIQVVEAPDVVKNKVSFSAFGFLDGEVSLKGKLKVLDDKWIQVIFEPPELKVGALE 342
           K KEMIQVVEAPD+V+NKV FSA GFLD EVSLKGKLK LDDKWIQV+FEPPEL++GALE
Sbjct: 139 KAKEMIQVVEAPDIVRNKVHFSALGFLDVEVSLKGKLKALDDKWIQVVFEPPELRLGALE 198

Query: 341 FQYGGESEVKLEITYVDEKIRLGKGSRGSLFVFQR 237
           FQYGGESEVKLEITY+D+++RLGKGSRGSLFVF+R
Sbjct: 199 FQYGGESEVKLEITYIDDRVRLGKGSRGSLFVFER 233


>ref|XP_004138759.1| PREDICTED: probable plastid-lipid-associated protein 8,
           chloroplastic-like [Cucumis sativus]
           gi|449499565|ref|XP_004160851.1| PREDICTED: probable
           plastid-lipid-associated protein 8, chloroplastic-like
           [Cucumis sativus]
          Length = 248

 Score =  302 bits (773), Expect = 8e-80
 Identities = 147/188 (78%), Positives = 167/188 (88%), Gaps = 1/188 (0%)
 Frame = -2

Query: 797 ISATVSTQD-EVRTSPDDLVSTILSKVTGTDRGVSLPTEGHKEVDEVAAKLQKYCVDKPV 621
           I A+VS  D +VRT PDDLV++ILSKVTG+DRGV L  E HKEV EVA +LQKYCV++PV
Sbjct: 59  IQASVSISDPQVRTGPDDLVASILSKVTGSDRGVLLSEEQHKEVAEVAEELQKYCVNEPV 118

Query: 620 ECPLIFGEWDVVYCSVPTSPGGGYRSALGRVVFKTKEMIQVVEAPDVVKNKVSFSAFGFL 441
           +CPLIFG WDVVYCSVPTSPGGGYRSA+GR+ FKTKEMIQ VEAPD +KNKVSFSA GFL
Sbjct: 119 KCPLIFGAWDVVYCSVPTSPGGGYRSAVGRIFFKTKEMIQAVEAPDTIKNKVSFSALGFL 178

Query: 440 DGEVSLKGKLKVLDDKWIQVIFEPPELKVGALEFQYGGESEVKLEITYVDEKIRLGKGSR 261
           DG+VSL GKL  LDDKWI+V+FE PELKVG LEFQYGGESEV+L+ITY+D+K+RLGKGSR
Sbjct: 179 DGQVSLTGKLTALDDKWIRVVFESPELKVGGLEFQYGGESEVQLQITYIDDKVRLGKGSR 238

Query: 260 GSLFVFQR 237
           GSLFVFQR
Sbjct: 239 GSLFVFQR 246


>gb|AEO33076.1| hypothetical protein [Amblyomma maculatum]
          Length = 230

 Score =  300 bits (767), Expect = 4e-79
 Identities = 146/197 (74%), Positives = 171/197 (86%)
 Frame = -2

Query: 827 RKRNVRNISRISATVSTQDEVRTSPDDLVSTILSKVTGTDRGVSLPTEGHKEVDEVAAKL 648
           R  + + I  + A++S Q  V  S DDLV++ILSKV GTDRGV LP EGHKEV ++A +L
Sbjct: 33  RHHHQQKIWIVHASISAQPAVAAS-DDLVASILSKVRGTDRGVQLPKEGHKEVADIAKEL 91

Query: 647 QKYCVDKPVECPLIFGEWDVVYCSVPTSPGGGYRSALGRVVFKTKEMIQVVEAPDVVKNK 468
            KYCV++PV+CPLIFGEWDV+YCS PTSPGGGYRSA GR++FKT EM+QVVE+PDV++NK
Sbjct: 92  GKYCVNQPVKCPLIFGEWDVLYCSNPTSPGGGYRSAFGRLIFKTNEMMQVVESPDVIRNK 151

Query: 467 VSFSAFGFLDGEVSLKGKLKVLDDKWIQVIFEPPELKVGALEFQYGGESEVKLEITYVDE 288
           VSFSA GF+DGEVSLKGKL V+DDKWI+VIFEPPELK+G+L FQYGGESEVKLEITYVDE
Sbjct: 152 VSFSALGFIDGEVSLKGKLNVIDDKWIKVIFEPPELKIGSLGFQYGGESEVKLEITYVDE 211

Query: 287 KIRLGKGSRGSLFVFQR 237
           KIRLGKGSRGSLFVF R
Sbjct: 212 KIRLGKGSRGSLFVFLR 228


>gb|AEQ20879.1| plastid lipid-associated protein, partial [Eriobotrya japonica]
          Length = 208

 Score =  297 bits (761), Expect = 2e-78
 Identities = 148/202 (73%), Positives = 170/202 (84%), Gaps = 1/202 (0%)
 Frame = -2

Query: 839 LQSQRKRNVRNISRISATVSTQDE-VRTSPDDLVSTILSKVTGTDRGVSLPTEGHKEVDE 663
           + SQ     RN  RI A+VS  D  VRT P++L ++ILSKVT +DRGV L  E  KEV +
Sbjct: 2   VSSQSHSCRRNTLRILASVSVSDPGVRTGPEELSASILSKVTNSDRGVLLKEEQQKEVAK 61

Query: 662 VAAKLQKYCVDKPVECPLIFGEWDVVYCSVPTSPGGGYRSALGRVVFKTKEMIQVVEAPD 483
            A +LQ YCV +PV+CPLIFG+WDVVYCSVPTSPGGGYRS LGR+  KTKEMIQV+EAPD
Sbjct: 62  EAEELQNYCVSEPVKCPLIFGDWDVVYCSVPTSPGGGYRSTLGRLFLKTKEMIQVIEAPD 121

Query: 482 VVKNKVSFSAFGFLDGEVSLKGKLKVLDDKWIQVIFEPPELKVGALEFQYGGESEVKLEI 303
           +VKNKVSFS FGFLDGEVSL GKLK LDDKWIQVIFEPPELKVGAL+F+YGGESEVKL+I
Sbjct: 122 IVKNKVSFSIFGFLDGEVSLTGKLKALDDKWIQVIFEPPELKVGALDFRYGGESEVKLQI 181

Query: 302 TYVDEKIRLGKGSRGSLFVFQR 237
           TY+D+K+RLGKGS+GSLFVFQR
Sbjct: 182 TYIDDKVRLGKGSKGSLFVFQR 203


>ref|XP_002527973.1| structural molecule, putative [Ricinus communis]
           gi|223532599|gb|EEF34385.1| structural molecule,
           putative [Ricinus communis]
          Length = 304

 Score =  291 bits (745), Expect = 1e-76
 Identities = 146/211 (69%), Positives = 173/211 (81%), Gaps = 1/211 (0%)
 Frame = -2

Query: 866 HLSFPIKSHLQSQRKRNVRNISRISATVSTQDEVRTS-PDDLVSTILSKVTGTDRGVSLP 690
           H   P + +    +K++ R +  +S + S   EVRT  PDDLV++I+SKVT TD GV+L 
Sbjct: 95  HAPLPARRYYYCSQKKSPRILCSVSISSS---EVRTGRPDDLVASIISKVTQTDGGVTLT 151

Query: 689 TEGHKEVDEVAAKLQKYCVDKPVECPLIFGEWDVVYCSVPTSPGGGYRSALGRVVFKTKE 510
            E H+EV EVA +LQ YCV +PV+CPLIFGEWDVVYCS PTSPGGGYRSA GR+ FKTKE
Sbjct: 152 KEEHEEVSEVAQQLQSYCVAEPVKCPLIFGEWDVVYCSRPTSPGGGYRSAFGRLFFKTKE 211

Query: 509 MIQVVEAPDVVKNKVSFSAFGFLDGEVSLKGKLKVLDDKWIQVIFEPPELKVGALEFQYG 330
           MIQ VEAPD V+NKVSFS FGFL+GEVSLKG+L+VLD+ WIQVIFE P+LKVGALE QYG
Sbjct: 212 MIQAVEAPDTVRNKVSFSLFGFLNGEVSLKGQLRVLDESWIQVIFEAPQLKVGALELQYG 271

Query: 329 GESEVKLEITYVDEKIRLGKGSRGSLFVFQR 237
           G+SEVKL+ITY+D+KIRLGKGSRGSLFVFQR
Sbjct: 272 GQSEVKLQITYIDDKIRLGKGSRGSLFVFQR 302


Top