BLASTX nr result

ID: Coptis24_contig00027830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027830
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266964.2| PREDICTED: uncharacterized protein LOC100244...    63   2e-08
emb|CBI22565.3| unnamed protein product [Vitis vinifera]               63   2e-08
emb|CAN62644.1| hypothetical protein VITISV_039594 [Vitis vinifera]    63   2e-08
ref|XP_002305251.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002333388.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>ref|XP_002266964.2| PREDICTED: uncharacterized protein LOC100244982 [Vitis vinifera]
          Length = 1076

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/83 (34%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
 Frame = -1

Query: 246 DILNMLKHGRRIPNTTEKQCNRLFCLDKSPLIFCSVARLLSLKGCGS-VAVLIMDNADLI 70
           +IL  L+    +PNTT+    + FCL  + L+FC+ +    +   G  + +L++D A  +
Sbjct: 594 EILRCLRQAIEVPNTTDHYRIKSFCLQNATLLFCTASSSAKIPVGGKPIELLVIDEAAQL 653

Query: 69  KEWESVLPLQLKGLRHVLLMGND 1
           KE ES +PLQ+ G+RH +L+G++
Sbjct: 654 KECESAIPLQISGIRHAILIGDE 676


>emb|CBI22565.3| unnamed protein product [Vitis vinifera]
          Length = 960

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/83 (34%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
 Frame = -1

Query: 246 DILNMLKHGRRIPNTTEKQCNRLFCLDKSPLIFCSVARLLSLKGCGS-VAVLIMDNADLI 70
           +IL  L+    +PNTT+    + FCL  + L+FC+ +    +   G  + +L++D A  +
Sbjct: 450 EILRCLRQAIEVPNTTDHYRIKSFCLQNATLLFCTASSSAKIPVGGKPIELLVIDEAAQL 509

Query: 69  KEWESVLPLQLKGLRHVLLMGND 1
           KE ES +PLQ+ G+RH +L+G++
Sbjct: 510 KECESAIPLQISGIRHAILIGDE 532


>emb|CAN62644.1| hypothetical protein VITISV_039594 [Vitis vinifera]
          Length = 1003

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/83 (34%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
 Frame = -1

Query: 246 DILNMLKHGRRIPNTTEKQCNRLFCLDKSPLIFCSVARLLSLKGCGS-VAVLIMDNADLI 70
           +IL  L+    +PNTT+    + FCL  + L+FC+ +    +   G  + +L++D A  +
Sbjct: 493 EILRCLRQAIEVPNTTDHYRIKSFCLQNATLLFCTASSSAKIPVGGKPIELLVIDEAAQL 552

Query: 69  KEWESVLPLQLKGLRHVLLMGND 1
           KE ES +PLQ+ G+RH +L+G++
Sbjct: 553 KECESAIPLQISGIRHAILIGDE 575


>ref|XP_002305251.1| predicted protein [Populus trichocarpa] gi|222848215|gb|EEE85762.1|
           predicted protein [Populus trichocarpa]
          Length = 1011

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 8/111 (7%)
 Frame = -1

Query: 309 VFGENSEEHYKNTGDLAFIRP-----DILNMLKHGRRIPNTTEKQCNRLFCLDKSPLIFC 145
           + GEN +E  K    +  I       + L +L    ++P   +K     FCL  + LIFC
Sbjct: 471 ILGENEDEERKLHNRIKLINEKRECLNTLRLLSLKFQVPEFADKNAIEKFCLSNACLIFC 530

Query: 144 SV---ARLLSLKGCGSVAVLIMDNADLIKEWESVLPLQLKGLRHVLLMGND 1
           +V   ARL S++    +  L++D A  +KE ES +PLQL GL H +L+G++
Sbjct: 531 TVSSSARLHSIR-MAPLRCLVIDEAAQLKECESTIPLQLFGLHHAILIGDE 580


>ref|XP_002333388.1| predicted protein [Populus trichocarpa] gi|222836389|gb|EEE74796.1|
           predicted protein [Populus trichocarpa]
          Length = 1087

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 8/111 (7%)
 Frame = -1

Query: 309 VFGENSEEHYKNTGDLAFIRP-----DILNMLKHGRRIPNTTEKQCNRLFCLDKSPLIFC 145
           + GEN +E  K    +  I       + L +L    ++P   +K     FCL  + LIFC
Sbjct: 504 ILGENEDEERKLHNRIKLINEKRECLNTLRLLSLKFQVPEFADKNAIEKFCLSNACLIFC 563

Query: 144 SV---ARLLSLKGCGSVAVLIMDNADLIKEWESVLPLQLKGLRHVLLMGND 1
           +V   ARL S++    +  L++D A  +KE ES +PLQL GL H +L+G++
Sbjct: 564 TVSSSARLHSIR-MAPLRCLVIDEAAQLKECESTIPLQLFGLHHAILIGDE 613


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