BLASTX nr result
ID: Coptis24_contig00027830
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00027830 (438 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002266964.2| PREDICTED: uncharacterized protein LOC100244... 63 2e-08 emb|CBI22565.3| unnamed protein product [Vitis vinifera] 63 2e-08 emb|CAN62644.1| hypothetical protein VITISV_039594 [Vitis vinifera] 63 2e-08 ref|XP_002305251.1| predicted protein [Populus trichocarpa] gi|2... 60 2e-07 ref|XP_002333388.1| predicted protein [Populus trichocarpa] gi|2... 60 2e-07 >ref|XP_002266964.2| PREDICTED: uncharacterized protein LOC100244982 [Vitis vinifera] Length = 1076 Score = 63.2 bits (152), Expect = 2e-08 Identities = 29/83 (34%), Positives = 51/83 (61%), Gaps = 1/83 (1%) Frame = -1 Query: 246 DILNMLKHGRRIPNTTEKQCNRLFCLDKSPLIFCSVARLLSLKGCGS-VAVLIMDNADLI 70 +IL L+ +PNTT+ + FCL + L+FC+ + + G + +L++D A + Sbjct: 594 EILRCLRQAIEVPNTTDHYRIKSFCLQNATLLFCTASSSAKIPVGGKPIELLVIDEAAQL 653 Query: 69 KEWESVLPLQLKGLRHVLLMGND 1 KE ES +PLQ+ G+RH +L+G++ Sbjct: 654 KECESAIPLQISGIRHAILIGDE 676 >emb|CBI22565.3| unnamed protein product [Vitis vinifera] Length = 960 Score = 63.2 bits (152), Expect = 2e-08 Identities = 29/83 (34%), Positives = 51/83 (61%), Gaps = 1/83 (1%) Frame = -1 Query: 246 DILNMLKHGRRIPNTTEKQCNRLFCLDKSPLIFCSVARLLSLKGCGS-VAVLIMDNADLI 70 +IL L+ +PNTT+ + FCL + L+FC+ + + G + +L++D A + Sbjct: 450 EILRCLRQAIEVPNTTDHYRIKSFCLQNATLLFCTASSSAKIPVGGKPIELLVIDEAAQL 509 Query: 69 KEWESVLPLQLKGLRHVLLMGND 1 KE ES +PLQ+ G+RH +L+G++ Sbjct: 510 KECESAIPLQISGIRHAILIGDE 532 >emb|CAN62644.1| hypothetical protein VITISV_039594 [Vitis vinifera] Length = 1003 Score = 63.2 bits (152), Expect = 2e-08 Identities = 29/83 (34%), Positives = 51/83 (61%), Gaps = 1/83 (1%) Frame = -1 Query: 246 DILNMLKHGRRIPNTTEKQCNRLFCLDKSPLIFCSVARLLSLKGCGS-VAVLIMDNADLI 70 +IL L+ +PNTT+ + FCL + L+FC+ + + G + +L++D A + Sbjct: 493 EILRCLRQAIEVPNTTDHYRIKSFCLQNATLLFCTASSSAKIPVGGKPIELLVIDEAAQL 552 Query: 69 KEWESVLPLQLKGLRHVLLMGND 1 KE ES +PLQ+ G+RH +L+G++ Sbjct: 553 KECESAIPLQISGIRHAILIGDE 575 >ref|XP_002305251.1| predicted protein [Populus trichocarpa] gi|222848215|gb|EEE85762.1| predicted protein [Populus trichocarpa] Length = 1011 Score = 60.1 bits (144), Expect = 2e-07 Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 8/111 (7%) Frame = -1 Query: 309 VFGENSEEHYKNTGDLAFIRP-----DILNMLKHGRRIPNTTEKQCNRLFCLDKSPLIFC 145 + GEN +E K + I + L +L ++P +K FCL + LIFC Sbjct: 471 ILGENEDEERKLHNRIKLINEKRECLNTLRLLSLKFQVPEFADKNAIEKFCLSNACLIFC 530 Query: 144 SV---ARLLSLKGCGSVAVLIMDNADLIKEWESVLPLQLKGLRHVLLMGND 1 +V ARL S++ + L++D A +KE ES +PLQL GL H +L+G++ Sbjct: 531 TVSSSARLHSIR-MAPLRCLVIDEAAQLKECESTIPLQLFGLHHAILIGDE 580 >ref|XP_002333388.1| predicted protein [Populus trichocarpa] gi|222836389|gb|EEE74796.1| predicted protein [Populus trichocarpa] Length = 1087 Score = 60.1 bits (144), Expect = 2e-07 Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 8/111 (7%) Frame = -1 Query: 309 VFGENSEEHYKNTGDLAFIRP-----DILNMLKHGRRIPNTTEKQCNRLFCLDKSPLIFC 145 + GEN +E K + I + L +L ++P +K FCL + LIFC Sbjct: 504 ILGENEDEERKLHNRIKLINEKRECLNTLRLLSLKFQVPEFADKNAIEKFCLSNACLIFC 563 Query: 144 SV---ARLLSLKGCGSVAVLIMDNADLIKEWESVLPLQLKGLRHVLLMGND 1 +V ARL S++ + L++D A +KE ES +PLQL GL H +L+G++ Sbjct: 564 TVSSSARLHSIR-MAPLRCLVIDEAAQLKECESTIPLQLFGLHHAILIGDE 613