BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027826
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_398878.1| hypothetical protein NitoCp045 [Nicotiana tomen...    79   3e-13
ref|YP_004891619.1| unnamed protein product (chloroplast) [Nicot...    79   3e-13
ref|NP_054513.1| hypothetical protein NitaCp037 [Nicotiana tabac...    77   1e-12
ref|NP_001045001.1| Os01g0881600 [Oryza sativa Japonica Group] g...    69   5e-10
ref|XP_003563812.1| PREDICTED: photosystem II reaction center pr...    67   1e-09

>ref|YP_398878.1| hypothetical protein NitoCp045 [Nicotiana tomentosiformis]
           gi|80750940|dbj|BAE48016.1| hypothetical protein
           [Nicotiana tomentosiformis]
          Length = 99

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/49 (75%), Positives = 44/49 (89%)
 Frame = +2

Query: 2   LLFNVYNKVHTITTGMNPIQNMNHKRKHLLNRSQEYQLQYL*AKEESFQ 148
           L F+V + +H+ITTGMNPI+NMNHKRK+LLNR QEYQLQYL +KEESFQ
Sbjct: 51  LRFHVDDSIHSITTGMNPIRNMNHKRKYLLNRLQEYQLQYLLSKEESFQ 99


>ref|YP_004891619.1| unnamed protein product (chloroplast) [Nicotiana undulata]
           gi|347453920|gb|AEO95578.1| hypothetical protein
           (chloroplast) [Nicotiana undulata]
           gi|347454031|gb|AEO95688.1| hypothetical protein
           [synthetic construct]
          Length = 99

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/49 (75%), Positives = 44/49 (89%)
 Frame = +2

Query: 2   LLFNVYNKVHTITTGMNPIQNMNHKRKHLLNRSQEYQLQYL*AKEESFQ 148
           L F+V + +H+ITTGMNPI+NMNHKRK+LLNR QEYQLQYL +KEESFQ
Sbjct: 51  LRFHVDDSIHSITTGMNPIRNMNHKRKYLLNRLQEYQLQYLLSKEESFQ 99


>ref|NP_054513.1| hypothetical protein NitaCp037 [Nicotiana tabacum]
           gi|78102550|ref|YP_358691.1| hypothetical protein
           NisyCp046 [Nicotiana sylvestris]
           gi|11846|emb|CAA77366.1| hypothetical protein [Nicotiana
           tabacum] gi|77799577|dbj|BAE46666.1| hypothetical
           protein [Nicotiana sylvestris] gi|225214|prf||1211235AV
           ORF 99A
          Length = 99

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 36/49 (73%), Positives = 43/49 (87%)
 Frame = +2

Query: 2   LLFNVYNKVHTITTGMNPIQNMNHKRKHLLNRSQEYQLQYL*AKEESFQ 148
           L F+V + +H+IT GMNPI+NMNHKRK+LLNR QEYQLQYL +KEESFQ
Sbjct: 51  LRFHVDDSIHSITRGMNPIRNMNHKRKYLLNRLQEYQLQYLLSKEESFQ 99


>ref|NP_001045001.1| Os01g0881600 [Oryza sativa Japonica Group]
           gi|113534532|dbj|BAF06915.1| Os01g0881600 [Oryza sativa
           Japonica Group]
          Length = 47

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/36 (88%), Positives = 33/36 (91%)
 Frame = -1

Query: 182 MWREVG*MADTTGRIPLWLIGTVAGILVIGLIGVFF 75
           MWR+VG MADTTGRIPLWLIGTV GI VIGLIGVFF
Sbjct: 1   MWRKVGEMADTTGRIPLWLIGTVTGIAVIGLIGVFF 36


>ref|XP_003563812.1| PREDICTED: photosystem II reaction center protein J-like
           [Brachypodium distachyon]
           gi|357149895|ref|XP_003575269.1| PREDICTED: photosystem
           II reaction center protein J-like [Brachypodium
           distachyon] gi|357166338|ref|XP_003580677.1| PREDICTED:
           photosystem II reaction center protein J-like
           [Brachypodium distachyon]
          Length = 47

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/36 (86%), Positives = 33/36 (91%)
 Frame = -1

Query: 182 MWREVG*MADTTGRIPLWLIGTVAGILVIGLIGVFF 75
           MWR+VG MADTTGRIPLWLIGTV GI VIGL+GVFF
Sbjct: 1   MWRKVGEMADTTGRIPLWLIGTVTGIPVIGLVGVFF 36