BLASTX nr result

ID: Coptis24_contig00027820 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027820
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281433.1| PREDICTED: uncharacterized protein LOC100245...    94   2e-17
emb|CAN67325.1| hypothetical protein VITISV_012830 [Vitis vinifera]    94   2e-17
ref|XP_003539698.1| PREDICTED: uncharacterized protein LOC100779...    93   3e-17
ref|XP_003539092.1| PREDICTED: uncharacterized protein LOC100803...    92   6e-17
ref|XP_002534353.1| conserved hypothetical protein [Ricinus comm...    92   6e-17

>ref|XP_002281433.1| PREDICTED: uncharacterized protein LOC100245073 [Vitis vinifera]
           gi|297746132|emb|CBI16188.3| unnamed protein product
           [Vitis vinifera]
          Length = 428

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 55/108 (50%), Positives = 71/108 (65%), Gaps = 13/108 (12%)
 Frame = +2

Query: 2   GSITVNDANTE--KNQGFSLVSHYKSRLPRGAADQ-----------IRVEDKEYFSGSLI 142
           GS++  D      K+QG +L+S YK+RLPRGAA+Q           + +EDKEYFSGSLI
Sbjct: 295 GSMSFKDCGPTIVKDQGLALISQYKARLPRGAANQETSMENPRYGGVSLEDKEYFSGSLI 354

Query: 143 MGTKKDDFPALKRSSSYNADRTSNLDLDNRXXXXXXXXXRAKCLPRKS 286
             TKKD FPALKRSSSYNAD +S L++ ++         RAKC+PR+S
Sbjct: 355 E-TKKDQFPALKRSSSYNADGSSQLEMGDK----EVDGVRAKCIPRRS 397


>emb|CAN67325.1| hypothetical protein VITISV_012830 [Vitis vinifera]
          Length = 942

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 55/108 (50%), Positives = 71/108 (65%), Gaps = 13/108 (12%)
 Frame = +2

Query: 2   GSITVNDANTE--KNQGFSLVSHYKSRLPRGAADQ-----------IRVEDKEYFSGSLI 142
           GS++  D      K+QG +L+S YK+RLPRGAA+Q           + +EDKEYFSGSLI
Sbjct: 295 GSMSFKDCGPTIVKDQGLALISQYKARLPRGAANQETSMENPRYGGVSLEDKEYFSGSLI 354

Query: 143 MGTKKDDFPALKRSSSYNADRTSNLDLDNRXXXXXXXXXRAKCLPRKS 286
             TKKD FPALKRSSSYNAD +S L++ ++         RAKC+PR+S
Sbjct: 355 E-TKKDQFPALKRSSSYNADGSSQLEMGDK----EVDGVRAKCIPRRS 397


>ref|XP_003539698.1| PREDICTED: uncharacterized protein LOC100779732 [Glycine max]
          Length = 448

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 60/118 (50%), Positives = 69/118 (58%), Gaps = 20/118 (16%)
 Frame = +2

Query: 23  ANTEKNQGFSLVSHYKSRLPRGAAD----------------QIRVEDKEYFSGSLIMGTK 154
           AN  K+QGFSLV HYKSR+PRGA +                ++R+EDKEYFSGSLI  TK
Sbjct: 320 ANAVKDQGFSLVGHYKSRMPRGAGNHSGNETGTSMEIPDLSRVRLEDKEYFSGSLI-ETK 378

Query: 155 KDDFPALKRSSSYNADRTSNLDLDNRXXXXXXXXXRAKCLPRKS----IKKEECQRRH 316
           K + PALKRSSSYNAD  S L +            RAKC+PRKS     KKEE    H
Sbjct: 379 KVETPALKRSSSYNADSGSRLQI----VEHEGEAVRAKCIPRKSKTLPTKKEEGVSMH 432


>ref|XP_003539092.1| PREDICTED: uncharacterized protein LOC100803283 [Glycine max]
          Length = 429

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 59/118 (50%), Positives = 69/118 (58%), Gaps = 20/118 (16%)
 Frame = +2

Query: 23  ANTEKNQGFSLVSHYKSRLPRGAAD----------------QIRVEDKEYFSGSLIMGTK 154
           AN  K++GFSLV HYKSR+PRGA +                ++R+EDKEYFSGSLI  TK
Sbjct: 301 ANAVKDRGFSLVGHYKSRMPRGAGNHSGKETGTSMEIPDLSRVRLEDKEYFSGSLI-ETK 359

Query: 155 KDDFPALKRSSSYNADRTSNLDLDNRXXXXXXXXXRAKCLPRKS----IKKEECQRRH 316
           K + PALKRSSSYNAD  S L +            RAKC+PRKS     KKEE    H
Sbjct: 360 KVETPALKRSSSYNADSGSRLQI----VEHEEDVVRAKCIPRKSKTLPTKKEEGASMH 413


>ref|XP_002534353.1| conserved hypothetical protein [Ricinus communis]
           gi|223525445|gb|EEF28033.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 441

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 55/108 (50%), Positives = 66/108 (61%), Gaps = 14/108 (12%)
 Frame = +2

Query: 2   GSITVND--ANTEKNQGFSLVSHYKSRLPRGAADQI------------RVEDKEYFSGSL 139
           GSI+  D  A   K QG SL+ HYK RLPRG   ++            R+EDKEYFSGSL
Sbjct: 303 GSISFRDCGATAVKEQGLSLIGHYKGRLPRGGGSRVGTSKEFLNFGGVRLEDKEYFSGSL 362

Query: 140 IMGTKKDDFPALKRSSSYNADRTSNLDLDNRXXXXXXXXXRAKCLPRK 283
           I  TKK++ PALKRSSSYNADR+S+L L  +         R KC+PRK
Sbjct: 363 IE-TKKEEVPALKRSSSYNADRSSHLHLAEK----EVEGARTKCIPRK 405


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