BLASTX nr result

ID: Coptis24_contig00027812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027812
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271515.2| PREDICTED: probable lysine-specific demethyl...   161   5e-38
emb|CBI39010.3| unnamed protein product [Vitis vinifera]              161   5e-38
ref|XP_002317068.1| jumonji domain protein [Populus trichocarpa]...   158   4e-37
ref|XP_002325772.1| jumonji domain protein [Populus trichocarpa]...   158   5e-37
ref|XP_002319654.1| jumonji domain protein [Populus trichocarpa]...   158   5e-37

>ref|XP_002271515.2| PREDICTED: probable lysine-specific demethylase JMJ14-like [Vitis
           vinifera]
          Length = 1118

 Score =  161 bits (408), Expect = 5e-38
 Identities = 75/102 (73%), Positives = 84/102 (82%), Gaps = 6/102 (5%)
 Frame = -1

Query: 290 GEYWRIVEKPSEEVEVYYGADLETGIFGSGFPKASCLVNKCDLDRYVTSGWNLQ------ 129
           GEYWRIVEKP++EVEVYYGADLET  F SGFPKAS L+++ D D+YV SGWNL       
Sbjct: 254 GEYWRIVEKPTDEVEVYYGADLETEAFVSGFPKASSLISENDSDQYVASGWNLNNFPRLP 313

Query: 128 GSLLSLEREDISGVLVPWLYFGMCFSSFCWHVEDHHLYSLNF 3
           GS+L  E+ DISGVLVPWLY GMCFSSFCWHVEDHHLYSLN+
Sbjct: 314 GSVLCFEQNDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNY 355


>emb|CBI39010.3| unnamed protein product [Vitis vinifera]
          Length = 951

 Score =  161 bits (408), Expect = 5e-38
 Identities = 75/102 (73%), Positives = 84/102 (82%), Gaps = 6/102 (5%)
 Frame = -1

Query: 290 GEYWRIVEKPSEEVEVYYGADLETGIFGSGFPKASCLVNKCDLDRYVTSGWNLQ------ 129
           GEYWRIVEKP++EVEVYYGADLET  F SGFPKAS L+++ D D+YV SGWNL       
Sbjct: 300 GEYWRIVEKPTDEVEVYYGADLETEAFVSGFPKASSLISENDSDQYVASGWNLNNFPRLP 359

Query: 128 GSLLSLEREDISGVLVPWLYFGMCFSSFCWHVEDHHLYSLNF 3
           GS+L  E+ DISGVLVPWLY GMCFSSFCWHVEDHHLYSLN+
Sbjct: 360 GSVLCFEQNDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNY 401


>ref|XP_002317068.1| jumonji domain protein [Populus trichocarpa]
           gi|222860133|gb|EEE97680.1| jumonji domain protein
           [Populus trichocarpa]
          Length = 753

 Score =  158 bits (400), Expect = 4e-37
 Identities = 75/102 (73%), Positives = 82/102 (80%), Gaps = 6/102 (5%)
 Frame = -1

Query: 290 GEYWRIVEKPSEEVEVYYGADLETGIFGSGFPKASCLVNKCDLDRYVTSGWNLQ------ 129
           GEYWRIVEKP++EV+V YGADLET  FGSGFPKAS L+ K D D+YV SGWNL       
Sbjct: 183 GEYWRIVEKPTDEVKVLYGADLETVTFGSGFPKASALMTKGDSDQYVVSGWNLNNLPRLP 242

Query: 128 GSLLSLEREDISGVLVPWLYFGMCFSSFCWHVEDHHLYSLNF 3
           GS+L  E  DISGVLVPWLY GMCFSSFCWHVEDHHLYSLN+
Sbjct: 243 GSVLCFEGCDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNY 284


>ref|XP_002325772.1| jumonji domain protein [Populus trichocarpa]
           gi|222862647|gb|EEF00154.1| jumonji domain protein
           [Populus trichocarpa]
          Length = 756

 Score =  158 bits (399), Expect = 5e-37
 Identities = 74/102 (72%), Positives = 79/102 (77%), Gaps = 6/102 (5%)
 Frame = -1

Query: 290 GEYWRIVEKPSEEVEVYYGADLETGIFGSGFPKASCLVNKCDLDRYVTSGWNLQ------ 129
           GEYWRIVEK +EE+EV YGADLETG+FGSGFPK S  V     DRY  SGWNL       
Sbjct: 189 GEYWRIVEKATEEIEVLYGADLETGVFGSGFPKTSSEVGSATNDRYTKSGWNLNNFPRLP 248

Query: 128 GSLLSLEREDISGVLVPWLYFGMCFSSFCWHVEDHHLYSLNF 3
           GS+LS E  DISGVLVPWLY GMCFSSFCWHVEDHHLYSLN+
Sbjct: 249 GSVLSFESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNY 290


>ref|XP_002319654.1| jumonji domain protein [Populus trichocarpa]
           gi|222858030|gb|EEE95577.1| jumonji domain protein
           [Populus trichocarpa]
          Length = 923

 Score =  158 bits (399), Expect = 5e-37
 Identities = 74/102 (72%), Positives = 80/102 (78%), Gaps = 6/102 (5%)
 Frame = -1

Query: 290 GEYWRIVEKPSEEVEVYYGADLETGIFGSGFPKASCLVNKCDLDRYVTSGWNLQ------ 129
           GEYWRIVEK +EE+EV YGADLETG+FGSGFPK S  V+    DRY  SGWNL       
Sbjct: 189 GEYWRIVEKATEEIEVLYGADLETGVFGSGFPKTSNEVSSATNDRYTKSGWNLNNFPRLP 248

Query: 128 GSLLSLEREDISGVLVPWLYFGMCFSSFCWHVEDHHLYSLNF 3
           GS+LS E  DISGVLVPWLY GMCFSSFCWHVEDHHLYSLN+
Sbjct: 249 GSILSFESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNY 290


Top