BLASTX nr result
ID: Coptis24_contig00027801
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00027801 (1244 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI22109.3| unnamed protein product [Vitis vinifera] 321 2e-85 ref|XP_002279448.1| PREDICTED: pentatricopeptide repeat-containi... 321 2e-85 ref|XP_002313272.1| predicted protein [Populus trichocarpa] gi|2... 299 1e-78 ref|XP_002299968.1| predicted protein [Populus trichocarpa] gi|2... 298 2e-78 ref|XP_002533283.1| pentatricopeptide repeat-containing protein,... 292 1e-76 >emb|CBI22109.3| unnamed protein product [Vitis vinifera] Length = 386 Score = 321 bits (823), Expect = 2e-85 Identities = 171/325 (52%), Positives = 227/325 (69%), Gaps = 1/325 (0%) Frame = -1 Query: 1058 VSKMWPYVAILSKYVNSYQLVVTQASTDDHKVTDGVLSGLIAEEENDPVFYKET-CTAYI 882 VS + P+ AILSK + SYQ + T+AS D+ V D L+ ++++ E P F E CT YI Sbjct: 46 VSWILPFFAILSKSIGSYQSLATEASPDEEVVPDEFLNEILSDIERSPKFSSEKLCTTYI 105 Query: 881 ERLCKSGNVADAAGLLQSLHNKHIFLGPRTYNLLLTVVREGKDFELLSKIFKDALVSCNF 702 ++L K+GN + AA +QSLH+KHIFL P YNLLL E + LS+IFKD LVS Sbjct: 106 DKLLKAGNPSAAARFMQSLHDKHIFLSPNAYNLLLVAASEANAIDFLSQIFKDLLVSNKP 165 Query: 701 LNPLFYPTLTKAFLNSTDSVPLLKFVGEVSEMKCPKSTXXXXXXXIAFAESKQIDKAIMI 522 L+ Y + K F + DSV LLKFV EVSE+ P++ AFAE +QI+K+++I Sbjct: 166 LSSTSYFNVAKVFTKTDDSV-LLKFVREVSELTFPRNATILNRIIHAFAECRQIEKSLII 224 Query: 521 FDLMKGLNCKPDRVTYNIVMDILGRAGWIDKMLHAFASMKESSLIPDIISYNTLINSFRK 342 FD MK L CKPD +TYN V+ LGRAG +D+MLH F+SMK +++ PDIISYNTL+NS +K Sbjct: 225 FDHMKSLKCKPDLITYNTVLGFLGRAGRLDEMLHEFSSMKVANIAPDIISYNTLLNSLQK 284 Query: 341 LGRLDLCVVFLQEMRENRVDPDLRTYTAVIDSFGRLGHIKEALGYFGQMKRRGIHPSIHI 162 +GRLDLC+VF +EM EN + PDLRTY A+I+ FG+ G+++EAL F +MK+ I PSI+I Sbjct: 285 VGRLDLCLVFFREMGENGLKPDLRTYRALIEGFGQSGNLEEALRLFSEMKQGQICPSIYI 344 Query: 161 YRSLISNSKKAEKLDLATSLLEEMN 87 YRSLI+ SKK K++LA SL EEMN Sbjct: 345 YRSLINYSKKMGKVELAMSLSEEMN 369 >ref|XP_002279448.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11900-like [Vitis vinifera] Length = 357 Score = 321 bits (823), Expect = 2e-85 Identities = 171/325 (52%), Positives = 227/325 (69%), Gaps = 1/325 (0%) Frame = -1 Query: 1058 VSKMWPYVAILSKYVNSYQLVVTQASTDDHKVTDGVLSGLIAEEENDPVFYKET-CTAYI 882 VS + P+ AILSK + SYQ + T+AS D+ V D L+ ++++ E P F E CT YI Sbjct: 17 VSWILPFFAILSKSIGSYQSLATEASPDEEVVPDEFLNEILSDIERSPKFSSEKLCTTYI 76 Query: 881 ERLCKSGNVADAAGLLQSLHNKHIFLGPRTYNLLLTVVREGKDFELLSKIFKDALVSCNF 702 ++L K+GN + AA +QSLH+KHIFL P YNLLL E + LS+IFKD LVS Sbjct: 77 DKLLKAGNPSAAARFMQSLHDKHIFLSPNAYNLLLVAASEANAIDFLSQIFKDLLVSNKP 136 Query: 701 LNPLFYPTLTKAFLNSTDSVPLLKFVGEVSEMKCPKSTXXXXXXXIAFAESKQIDKAIMI 522 L+ Y + K F + DSV LLKFV EVSE+ P++ AFAE +QI+K+++I Sbjct: 137 LSSTSYFNVAKVFTKTDDSV-LLKFVREVSELTFPRNATILNRIIHAFAECRQIEKSLII 195 Query: 521 FDLMKGLNCKPDRVTYNIVMDILGRAGWIDKMLHAFASMKESSLIPDIISYNTLINSFRK 342 FD MK L CKPD +TYN V+ LGRAG +D+MLH F+SMK +++ PDIISYNTL+NS +K Sbjct: 196 FDHMKSLKCKPDLITYNTVLGFLGRAGRLDEMLHEFSSMKVANIAPDIISYNTLLNSLQK 255 Query: 341 LGRLDLCVVFLQEMRENRVDPDLRTYTAVIDSFGRLGHIKEALGYFGQMKRRGIHPSIHI 162 +GRLDLC+VF +EM EN + PDLRTY A+I+ FG+ G+++EAL F +MK+ I PSI+I Sbjct: 256 VGRLDLCLVFFREMGENGLKPDLRTYRALIEGFGQSGNLEEALRLFSEMKQGQICPSIYI 315 Query: 161 YRSLISNSKKAEKLDLATSLLEEMN 87 YRSLI+ SKK K++LA SL EEMN Sbjct: 316 YRSLINYSKKMGKVELAMSLSEEMN 340 >ref|XP_002313272.1| predicted protein [Populus trichocarpa] gi|222849680|gb|EEE87227.1| predicted protein [Populus trichocarpa] Length = 382 Score = 299 bits (765), Expect = 1e-78 Identities = 160/348 (45%), Positives = 225/348 (64%), Gaps = 1/348 (0%) Frame = -1 Query: 1079 LPSAHLGVSKMWPYVAILSKYVNSYQLVVTQASTDDHKVTDGVLSGLIAEEENDP-VFYK 903 + S +G + P+ A +++ + Y+ + T+AS D ++ D L+ ++ EN P + Sbjct: 34 ITSIPVGSHWILPHFATITEVIGHYKQLTTRASFDGEEIKDDNLNQMLEAVENAPECTTR 93 Query: 902 ETCTAYIERLCKSGNVADAAGLLQSLHNKHIFLGPRTYNLLLTVVREGKDFELLSKIFKD 723 + TAY+ LCK+G + A LL+ L +K+IFLGP YN++L E D E+LS++FKD Sbjct: 94 KVGTAYVHNLCKAGTLFAAVRLLRLLRDKNIFLGPSAYNIILVTASEKNDVEILSQVFKD 153 Query: 722 ALVSCNFLNPLFYPTLTKAFLNSTDSVPLLKFVGEVSEMKCPKSTXXXXXXXIAFAESKQ 543 ++S L Y L + F+ S D V LL+ V EVSE+ P ST AFAE Q Sbjct: 154 LILSFQSLPSSLYLKLARGFVKSNDDVQLLRLVKEVSELTFPSSTKVVNRFIFAFAECGQ 213 Query: 542 IDKAIMIFDLMKGLNCKPDRVTYNIVMDILGRAGWIDKMLHAFASMKESSLIPDIISYNT 363 DKAI+IF+ M+ L CKPD VTYN V+D+LGRAG ID+ML FASMKE+ ++PD ISYNT Sbjct: 214 FDKAILIFEQMENLKCKPDLVTYNTVLDLLGRAGRIDEMLGEFASMKEAGILPDFISYNT 273 Query: 362 LINSFRKLGRLDLCVVFLQEMRENRVDPDLRTYTAVIDSFGRLGHIKEALGYFGQMKRRG 183 L+N K+GRLDLC V+ ++M N ++PDL TYTA+I SFG+ G+I+E+L F +MK + Sbjct: 274 LLNQLTKVGRLDLCSVYFRDMVGNGIEPDLLTYTALIWSFGQSGNIEESLRLFNEMKTKQ 333 Query: 182 IHPSIHIYRSLISNSKKAEKLDLATSLLEEMNFSVLNY*SL*CFKEEH 39 I PSI+IYRSLI++ KK K++LA + LEEMN S+ N FK H Sbjct: 334 IRPSIYIYRSLIASLKKMGKIELAMTFLEEMNASMSNLAGPKDFKRTH 381 >ref|XP_002299968.1| predicted protein [Populus trichocarpa] gi|222847226|gb|EEE84773.1| predicted protein [Populus trichocarpa] Length = 352 Score = 298 bits (763), Expect = 2e-78 Identities = 158/329 (48%), Positives = 222/329 (67%), Gaps = 1/329 (0%) Frame = -1 Query: 1055 SKMWPYVAILSKYVNSYQLVVTQASTDDHKVTDGVLSGLIAEEENDPVFY-KETCTAYIE 879 S++ P++A +++ ++ + + T+ S D+ +V D L+ +I EN P ++ TAY+ Sbjct: 12 SQISPHLATITEVIDHCKRLTTRVSFDEGEVKDDNLNQMINAVENAPESATRKIGTAYVH 71 Query: 878 RLCKSGNVADAAGLLQSLHNKHIFLGPRTYNLLLTVVREGKDFELLSKIFKDALVSCNFL 699 LCK+GN+ A LLQSL +K+IFLGP YN++L E D +LS++FKD +VSC L Sbjct: 72 NLCKAGNLFTAVRLLQSLCDKNIFLGPSAYNIILVAASEKNDIAILSQVFKDLIVSCQSL 131 Query: 698 NPLFYPTLTKAFLNSTDSVPLLKFVGEVSEMKCPKSTXXXXXXXIAFAESKQIDKAIMIF 519 Y L + F+ + D V LL+ V EVSEM P S AFAE Q DKA++IF Sbjct: 132 PSTSYLKLARGFVKTNDDVQLLRLVKEVSEMTFPSSMMVVNRIIFAFAECGQFDKALLIF 191 Query: 518 DLMKGLNCKPDRVTYNIVMDILGRAGWIDKMLHAFASMKESSLIPDIISYNTLINSFRKL 339 M+ L CKPD VTYN V+D+LG AG ID+ML FASMKE+ ++PD ISYNTL+N K+ Sbjct: 192 KQMENLKCKPDLVTYNTVLDLLGHAGRIDEMLCEFASMKEAGILPDFISYNTLLNQLWKV 251 Query: 338 GRLDLCVVFLQEMRENRVDPDLRTYTAVIDSFGRLGHIKEALGYFGQMKRRGIHPSIHIY 159 GRLDLC V+ ++M E+ ++PDL TYTA+I SFG+ G+I+E+L F +MK + I PSI+IY Sbjct: 252 GRLDLCSVYSRDMVESGIEPDLLTYTALIGSFGQSGNIEESLRLFNEMKTKQIRPSIYIY 311 Query: 158 RSLISNSKKAEKLDLATSLLEEMNFSVLN 72 RSLI++ KK K++LA +LLEEMN S+ N Sbjct: 312 RSLIASLKKMGKVELAMTLLEEMNASMSN 340 >ref|XP_002533283.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223526886|gb|EEF29094.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 405 Score = 292 bits (748), Expect = 1e-76 Identities = 146/306 (47%), Positives = 211/306 (68%) Frame = -1 Query: 989 QASTDDHKVTDGVLSGLIAEEENDPVFYKETCTAYIERLCKSGNVADAAGLLQSLHNKHI 810 +AS ++ +V + L+ ++A +N P +E CT Y+ +LC SG++ A LLQSL N++I Sbjct: 88 KASLNEDEVAEAYLNIILAAIQNAPSSIEEICTGYLHKLCNSGSLFVAVRLLQSLQNRNI 147 Query: 809 FLGPRTYNLLLTVVREGKDFELLSKIFKDALVSCNFLNPLFYPTLTKAFLNSTDSVPLLK 630 LGP YNL++ E +++S++FKD ++SC L + L + F+N+ D V L+K Sbjct: 148 TLGPNAYNLVMEAAGEANKADIVSRVFKDLMMSCKSLPSSSFINLARGFINTNDHVLLMK 207 Query: 629 FVGEVSEMKCPKSTXXXXXXXIAFAESKQIDKAIMIFDLMKGLNCKPDRVTYNIVMDILG 450 FV EV E+ P+S AFAE +Q DKA++IFD +K L KPD +TYN+V+ ILG Sbjct: 208 FVKEVLELAFPRSMVVINRIIFAFAECRQFDKALLIFDQIKDLEYKPDLITYNMVLHILG 267 Query: 449 RAGWIDKMLHAFASMKESSLIPDIISYNTLINSFRKLGRLDLCVVFLQEMRENRVDPDLR 270 RAG +D+ML+ F+SMKE+ ++PD I YNTL+N +K GRLDLC+V+++EM E+ ++ DL Sbjct: 268 RAGRVDEMLYEFSSMKEAGIVPDFICYNTLLNQLQKAGRLDLCLVYIREMGESGIEADLL 327 Query: 269 TYTAVIDSFGRLGHIKEALGYFGQMKRRGIHPSIHIYRSLISNSKKAEKLDLATSLLEEM 90 TYTA+I SFG+ GHI+E+L F MK R I PSI+IYRSLI+ +KK K++LA +LLEEM Sbjct: 328 TYTALIQSFGKSGHIEESLRLFDDMKTRQIRPSIYIYRSLINTAKKMGKVELAMTLLEEM 387 Query: 89 NFSVLN 72 N S N Sbjct: 388 NASPPN 393