BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027796
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula] g...   106   2e-21
ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containi...   104   9e-21
emb|CBI36158.3| unnamed protein product [Vitis vinifera]              104   9e-21
ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containi...   101   6e-20
dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]    100   2e-19

>ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
           gi|357455013|ref|XP_003597787.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|355486828|gb|AES68031.1| Beta-D-galactosidase
           [Medicago truncatula] gi|355486835|gb|AES68038.1|
           Pentatricopeptide repeat-containing protein [Medicago
           truncatula]
          Length = 639

 Score =  106 bits (264), Expect = 2e-21
 Identities = 50/64 (78%), Positives = 58/64 (90%)
 Frame = -3

Query: 257 KMKNANIKPDSVSYNTVLGCLSHAGMFEEAVRLMKEMSSNGFDYDLITYSSILEAVGKID 78
           KMK++ IKPD+VSYNTVLGCLS AG+FEEA +LMKEM+S GF+YDLITYSSILEAVGK+D
Sbjct: 572 KMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKGFEYDLITYSSILEAVGKVD 631

Query: 77  NIRN 66
             RN
Sbjct: 632 EDRN 635


>ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Vitis vinifera]
          Length = 725

 Score =  104 bits (259), Expect = 9e-21
 Identities = 50/60 (83%), Positives = 55/60 (91%)
 Frame = -3

Query: 257 KMKNANIKPDSVSYNTVLGCLSHAGMFEEAVRLMKEMSSNGFDYDLITYSSILEAVGKID 78
           +MKN+ IKPD VSYNTVLGCLS AGMFEEA +LMKEM+S GF+YDLITYSSILEAVGKID
Sbjct: 571 RMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAVGKID 630


>emb|CBI36158.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  104 bits (259), Expect = 9e-21
 Identities = 50/60 (83%), Positives = 55/60 (91%)
 Frame = -3

Query: 257 KMKNANIKPDSVSYNTVLGCLSHAGMFEEAVRLMKEMSSNGFDYDLITYSSILEAVGKID 78
           +MKN+ IKPD VSYNTVLGCLS AGMFEEA +LMKEM+S GF+YDLITYSSILEAVGKID
Sbjct: 571 RMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAVGKID 630


>ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Glycine max]
          Length = 631

 Score =  101 bits (252), Expect = 6e-20
 Identities = 47/63 (74%), Positives = 56/63 (88%)
 Frame = -3

Query: 257 KMKNANIKPDSVSYNTVLGCLSHAGMFEEAVRLMKEMSSNGFDYDLITYSSILEAVGKID 78
           KMKN+ IKPD VS+NT+LGCLS AG+FEEA +LM+EMSS GF YDLITYSSILEAVGK+D
Sbjct: 565 KMKNSTIKPDVVSFNTILGCLSRAGLFEEAAKLMQEMSSKGFQYDLITYSSILEAVGKVD 624

Query: 77  NIR 69
           + +
Sbjct: 625 DCK 627


>dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 628

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 47/59 (79%), Positives = 54/59 (91%)
 Frame = -3

Query: 254 MKNANIKPDSVSYNTVLGCLSHAGMFEEAVRLMKEMSSNGFDYDLITYSSILEAVGKID 78
           MK + IKPD+VSYNTVLG LSHAGMFEEA +LMKEM++ GFDYDLITYSSILEA+GK+D
Sbjct: 568 MKQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNAIGFDYDLITYSSILEAIGKVD 626