BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027793
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK39377.1| unknown [Medicago truncatula]                          140   1e-31
ref|XP_003601216.1| RNA-binding protein [Medicago truncatula] gi...   140   1e-31
emb|CBI14979.3| unnamed protein product [Vitis vinifera]              136   2e-30
ref|XP_002302756.1| predicted protein [Populus trichocarpa] gi|2...   128   5e-28
dbj|BAD68248.1| hypothetical protein [Oryza sativa Japonica Group]    121   5e-26

>gb|AFK39377.1| unknown [Medicago truncatula]
          Length = 507

 Score =  140 bits (352), Expect = 1e-31
 Identities = 73/164 (44%), Positives = 89/164 (54%), Gaps = 31/164 (18%)
 Frame = +3

Query: 81  EKESARSAIESCQFKWDEQTQLYFHASSGFYHDPKAGWYYSSKDGLYYKFENGSYVPFES 260
           + E   S    C F WDE +QLYFHASSGFYHDP AGWYYS+KDG+YYKFE+G+YVP + 
Sbjct: 2   DPEPQNSENSDCTFVWDENSQLYFHASSGFYHDPNAGWYYSTKDGVYYKFEDGNYVPLDC 61

Query: 261 DKDEEYDEFMRSLAVSDE---AIQDDNQCPKCIS--------------------DDRPE- 368
           +KD++ +E         E    IQD N    C S                    DD    
Sbjct: 62  NKDDDVEEIYVCKETKPERTQQIQDINNEEDCASFLGNEIETNQQIGTLTEEAGDDAMNS 121

Query: 369 -------NPPPPSEWLEETLINLYLTGYSNSVTDLGDNLVTPTE 479
                  NPPPPSEWLE+TLI+LYL+GY+N      D +  P E
Sbjct: 122 TNSPTCGNPPPPSEWLEDTLIDLYLSGYNNIAVSAADTVTDPVE 165


>ref|XP_003601216.1| RNA-binding protein [Medicago truncatula]
           gi|355490264|gb|AES71467.1| RNA-binding protein
           [Medicago truncatula]
          Length = 560

 Score =  140 bits (352), Expect = 1e-31
 Identities = 73/164 (44%), Positives = 89/164 (54%), Gaps = 31/164 (18%)
 Frame = +3

Query: 81  EKESARSAIESCQFKWDEQTQLYFHASSGFYHDPKAGWYYSSKDGLYYKFENGSYVPFES 260
           + E   S    C F WDE +QLYFHASSGFYHDP AGWYYS+KDG+YYKFE+G+YVP + 
Sbjct: 2   DPEPQNSENSDCTFVWDENSQLYFHASSGFYHDPNAGWYYSTKDGVYYKFEDGNYVPLDC 61

Query: 261 DKDEEYDEFMRSLAVSDE---AIQDDNQCPKCIS--------------------DDRPE- 368
           +KD++ +E         E    IQD N    C S                    DD    
Sbjct: 62  NKDDDVEEIYVCKETKPERTQQIQDINNEEDCASFLGNEIETNQQIGTLTEEAGDDAMNS 121

Query: 369 -------NPPPPSEWLEETLINLYLTGYSNSVTDLGDNLVTPTE 479
                  NPPPPSEWLE+TLI+LYL+GY+N      D +  P E
Sbjct: 122 TNSPTCGNPPPPSEWLEDTLIDLYLSGYNNIAVSAADTVTDPVE 165


>emb|CBI14979.3| unnamed protein product [Vitis vinifera]
          Length = 483

 Score =  136 bits (343), Expect = 2e-30
 Identities = 76/167 (45%), Positives = 96/167 (57%), Gaps = 34/167 (20%)
 Frame = +3

Query: 120 FKWDEQTQLYFHASSGFYHDPKAGWYYSSKDGLYYKFENGSYVPFESDK---DE----EY 278
           FKWDE++QLYFH SSGFYHDP AGWYYSS+DGLYYKFE+G+YV  +S K   DE    E 
Sbjct: 14  FKWDEKSQLYFHPSSGFYHDPNAGWYYSSRDGLYYKFEDGNYVLLDSQKVQGDECAIDEG 73

Query: 279 DEFMRSLAVSDE--------------AIQDD---------NQCPK----CISDDRPENPP 377
            E +    + DE              + Q D         ++C      C+S    ENPP
Sbjct: 74  GEVLPGNTIQDEQCTNSYCWNDEYYSSFQGDESEGMGTAADECTPGHTTCVSSHDAENPP 133

Query: 378 PPSEWLEETLINLYLTGYSNSVTDLGDNLVTPTEPDVGCDSDLLVNG 518
           PPSEWLE+TLI+LYL+GYS +  +  D +  P E D G +  L  +G
Sbjct: 134 PPSEWLEDTLIDLYLSGYSTTAINATDEVRMPLETDEGDNFKLSAHG 180


>ref|XP_002302756.1| predicted protein [Populus trichocarpa] gi|222844482|gb|EEE82029.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score =  128 bits (321), Expect = 5e-28
 Identities = 77/177 (43%), Positives = 94/177 (53%), Gaps = 37/177 (20%)
 Frame = +3

Query: 81  EKESARSAIESCQFKWDEQTQLYFHASSGFYHDPKAGWYYSSKDGLYYKFENGSYVPFE- 257
           E +S  +  +   F WD+ TQLYFHASSGFYHDP AGW+YSS+DGLYYKFENGSYV  E 
Sbjct: 6   EPDSQETQRDDFAFDWDQTTQLYFHASSGFYHDPSAGWFYSSRDGLYYKFENGSYVLLEC 65

Query: 258 SDK----------------DEEY--------------------DEFMRSLAVSDEAIQDD 329
           SDK                DE +                    + F     V DE+   +
Sbjct: 66  SDKVNNECERETFVDNPLQDESFTHVEGNVYENLYSFPPANDSESFQHRGVVVDES---N 122

Query: 330 NQCPKCISDDRPENPPPPSEWLEETLINLYLTGYSNSVTDLGDNLVTPTEPDVGCDS 500
               +C S   PENPP PSEWLEETLIN++L+G SN   D  D+ V   + DV  D+
Sbjct: 123 LGYTECSSIQEPENPPAPSEWLEETLINIFLSG-SNRAIDASDDPVIALKMDVNNDN 178


>dbj|BAD68248.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 450

 Score =  121 bits (304), Expect = 5e-26
 Identities = 55/121 (45%), Positives = 81/121 (66%), Gaps = 4/121 (3%)
 Frame = +3

Query: 117 QFKWDEQTQLYFHASSGFYHDPKAGWYYSSKDGLYYKFENGSYVPFESDKDEEYDEFMRS 296
           +F+WDE +QLY+HAS+GFYHDP AGWYYS +DG YY ++NG+YVP+  D   E       
Sbjct: 17  RFEWDEDSQLYYHASTGFYHDPVAGWYYSGRDGQYYIYDNGNYVPWTPDAGNEPKTHNPC 76

Query: 297 LAVSDEAIQDDNQCPKCISDDRPENPPPPSEWLEETLINLYLTGYSNSVTD----LGDNL 464
              + + ++  +   + I D++ E   PPSEW+EETLIN++L+GYSN+  +    LGD+ 
Sbjct: 77  DESNQDFLEPSSGLEQDIPDNQNETQRPPSEWMEETLINMFLSGYSNAEVNADISLGDSQ 136

Query: 465 V 467
           +
Sbjct: 137 I 137