BLASTX nr result

ID: Coptis24_contig00027783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027783
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270850.1| PREDICTED: uncharacterized protein LOC100253...   195   4e-48
ref|XP_002518969.1| beta-1,3-n-acetylglucosaminyltransferase rad...   185   3e-45
ref|XP_002317032.1| predicted protein [Populus trichocarpa] gi|2...   179   3e-43
ref|XP_003517535.1| PREDICTED: uncharacterized protein LOC100785...   172   2e-41
ref|XP_003537924.1| PREDICTED: uncharacterized protein LOC100819...   170   1e-40

>ref|XP_002270850.1| PREDICTED: uncharacterized protein LOC100253017 [Vitis vinifera]
          Length = 533

 Score =  195 bits (495), Expect = 4e-48
 Identities = 109/206 (52%), Positives = 120/206 (58%), Gaps = 32/206 (15%)
 Frame = +2

Query: 5   AKNHRPRR------RSHTTGTAVIVVLSLLFSTTAWLSLVFSGTTTRCWHRLKD------ 148
           + N  PRR      R   TGTAV+ VL+ L ST AWLSLVFSGTTTRCWHR KD      
Sbjct: 13  SSNMSPRRVRSRHWRHSRTGTAVVAVLAFLLSTAAWLSLVFSGTTTRCWHRFKDWERRPQ 72

Query: 149 --------------------SRPSXXXXXXXXXXXXXXXXXXXEALALDQIVFGIAGSSQ 268
                               + P                    E L+L  IVFGIAGSS 
Sbjct: 73  AFPWGRRRQDRSSSILQPPTTSPPPPSVSLLPFPRNASLPSAGEELSLRHIVFGIAGSSH 132

Query: 269 LWKRRKEYVRLWWRPDDMRGHLWXXXXXXXXXXXXXXXXTLPPIMLSEDISRFRYTNPTG 448
           LWKRRKE VRLWWRP+DMRGH+W                +LP IM+SEDISRFRYTNPTG
Sbjct: 133 LWKRRKELVRLWWRPNDMRGHVWLEERVSPEEGDD----SLPAIMVSEDISRFRYTNPTG 188

Query: 449 HPSGLRISRIVSESFRLGLPNVRWFV 526
           HPSGLRISRI+SESFRLGLP+VRWFV
Sbjct: 189 HPSGLRISRILSESFRLGLPDVRWFV 214


>ref|XP_002518969.1| beta-1,3-n-acetylglucosaminyltransferase radical fringe, putative
           [Ricinus communis] gi|223541956|gb|EEF43502.1|
           beta-1,3-n-acetylglucosaminyltransferase radical fringe,
           putative [Ricinus communis]
          Length = 538

 Score =  185 bits (470), Expect = 3e-45
 Identities = 103/204 (50%), Positives = 119/204 (58%), Gaps = 29/204 (14%)
 Frame = +2

Query: 2   LAKNHRPRRRSHTTGTAVIVVLSLLFSTTAWLSLVFSGTTTRCWHRLKD----------- 148
           L++    R R   TGTAV+VV +LL STTAWLSL+FSGTT RCWHR +            
Sbjct: 18  LSRTRSRRWRHSRTGTAVVVVAALLVSTTAWLSLIFSGTTARCWHRFRKWEGSPSTLSWH 77

Query: 149 ------------------SRPSXXXXXXXXXXXXXXXXXXXEALALDQIVFGIAGSSQLW 274
                              RPS                   E L L  I+FGIAGSSQLW
Sbjct: 78  SDHHLSAVLPLPPPPPPPPRPSSLQLSRNRSLSEENYKGSSE-LTLKHIMFGIAGSSQLW 136

Query: 275 KRRKEYVRLWWRPDDMRGHLWXXXXXXXXXXXXXXXXTLPPIMLSEDISRFRYTNPTGHP 454
           K+R+E+VRLWWRP++MRGH+W                +LP IM+SED SRFRYTNPTGHP
Sbjct: 137 KQRREFVRLWWRPNNMRGHVWLEEEVSKEDWDD----SLPQIMISEDTSRFRYTNPTGHP 192

Query: 455 SGLRISRIVSESFRLGLPNVRWFV 526
           SGLRISRIV ESFRLGLP+VRWFV
Sbjct: 193 SGLRISRIVLESFRLGLPDVRWFV 216


>ref|XP_002317032.1| predicted protein [Populus trichocarpa] gi|222860097|gb|EEE97644.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score =  179 bits (453), Expect = 3e-43
 Identities = 98/202 (48%), Positives = 114/202 (56%), Gaps = 29/202 (14%)
 Frame = +2

Query: 8   KNHRPRRRSHTTGTAVIVVLSLLFSTTAWLSLVFSGTTTRCWHRLKDSRPSXXXXXXXXX 187
           +N   R R   TGTAV+VV +L+ STTAWLSLVFSGTT RCWHR K+   S         
Sbjct: 18  RNRNRRWRQSRTGTAVVVVAALVISTTAWLSLVFSGTTARCWHRFKNWEGSPHTLTWKPR 77

Query: 188 XXXXXXXXXXEA-----------------------------LALDQIVFGIAGSSQLWKR 280
                     +                              L L+ IVFGIAGSSQLWKR
Sbjct: 78  SQKPNQNGKVDGISSFSTAPSLQLGRNRSLSEAERRKVEAGLTLNHIVFGIAGSSQLWKR 137

Query: 281 RKEYVRLWWRPDDMRGHLWXXXXXXXXXXXXXXXXTLPPIMLSEDISRFRYTNPTGHPSG 460
           R+E++RLWWR + MRGH+W                +LP IM+SED SRFRYTNPTGHPSG
Sbjct: 138 RREFIRLWWRKNSMRGHVWLEEKVDDKEWDE----SLPVIMISEDTSRFRYTNPTGHPSG 193

Query: 461 LRISRIVSESFRLGLPNVRWFV 526
           LRI RIV E+FRLGL +VRWFV
Sbjct: 194 LRIGRIVLETFRLGLSDVRWFV 215


>ref|XP_003517535.1| PREDICTED: uncharacterized protein LOC100785910 [Glycine max]
          Length = 545

 Score =  172 bits (437), Expect = 2e-41
 Identities = 95/183 (51%), Positives = 106/183 (57%), Gaps = 22/183 (12%)
 Frame = +2

Query: 44  GTAVIVVLSLLFSTTAWLSLVFSGTTTRCWHRLKDSR----------------------P 157
           GT  + + +LL STTAWLSLVFS  TT C+H LKD                        P
Sbjct: 48  GTFAVAIAALLISTTAWLSLVFSDATTCCFHHLKDWESSPHFFNWKKCISHRLAKVTPPP 107

Query: 158 SXXXXXXXXXXXXXXXXXXXEALALDQIVFGIAGSSQLWKRRKEYVRLWWRPDDMRGHLW 337
           +                   E L+L  IVFGIAGSSQLWKRRKEYV+LWWRP+DMRGH+W
Sbjct: 108 ALQYETVNAHLHNGSRTVEQEGLSLKHIVFGIAGSSQLWKRRKEYVKLWWRPNDMRGHVW 167

Query: 338 XXXXXXXXXXXXXXXXTLPPIMLSEDISRFRYTNPTGHPSGLRISRIVSESFRLGLPNVR 517
                            LPPIM+SEDIS FRYTNP GHPSGLRISRIV ESF LGL +VR
Sbjct: 168 LEEQVLEEPGDDL----LPPIMISEDISYFRYTNPIGHPSGLRISRIVRESFCLGLSDVR 223

Query: 518 WFV 526
           WFV
Sbjct: 224 WFV 226


>ref|XP_003537924.1| PREDICTED: uncharacterized protein LOC100819814 [Glycine max]
          Length = 545

 Score =  170 bits (431), Expect = 1e-40
 Identities = 94/197 (47%), Positives = 111/197 (56%), Gaps = 22/197 (11%)
 Frame = +2

Query: 2   LAKNHRPRRRSHTTGTAVIVVLSLLFSTTAWLSLVFSGTTTRCWHRLKDSR--------- 154
           ++++   + R    GT  + + +LL STTAWLS+VFS  TT C+H LKD           
Sbjct: 34  ISRSRSRQWRQCRIGTFAVAIAALLISTTAWLSVVFSDATTCCFHHLKDWESSPHFFNWK 93

Query: 155 -------------PSXXXXXXXXXXXXXXXXXXXEALALDQIVFGIAGSSQLWKRRKEYV 295
                        P+                   E L+L  IVFGIAGSSQLWKRRKEYV
Sbjct: 94  KCISHRLAKVKPPPALQFETMNDHLHNGSSIVEEEGLSLKHIVFGIAGSSQLWKRRKEYV 153

Query: 296 RLWWRPDDMRGHLWXXXXXXXXXXXXXXXXTLPPIMLSEDISRFRYTNPTGHPSGLRISR 475
           +LWWRP+DMRGH+W                 LPPIM+SED S FRYTNP GHPSGLRISR
Sbjct: 154 KLWWRPNDMRGHVWLEEQVLEEPGDDL----LPPIMISEDTSYFRYTNPVGHPSGLRISR 209

Query: 476 IVSESFRLGLPNVRWFV 526
           IV ESF LGL +VRWFV
Sbjct: 210 IVRESFCLGLSDVRWFV 226


Top