BLASTX nr result

ID: Coptis24_contig00027779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027779
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301600.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15
ref|XP_002321150.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
ref|XP_002301601.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
ref|XP_002262911.1| PREDICTED: small ubiquitin-related modifier ...    86   4e-15
emb|CAN79327.1| hypothetical protein VITISV_032072 [Vitis vinifera]    86   4e-15

>ref|XP_002301600.1| predicted protein [Populus trichocarpa] gi|222843326|gb|EEE80873.1|
           predicted protein [Populus trichocarpa]
          Length = 105

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 44/91 (48%), Positives = 60/91 (65%)
 Frame = +2

Query: 188 EESERKPSLTGQSRKVHLTLKAQDQIEVKFSVKRTVPLQKLMDAYCLERSVEANSFRFLV 367
           +E ++KP+   QS  ++L +K QD  EV F +KR+  L+KLM+AYC  +SVE NS  FL 
Sbjct: 9   QEEDKKPN--DQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVEINSIAFLF 66

Query: 368 DGQRLKGHRTADDYSFEDGDMIDVFNAQMGG 460
           DG+RL+G +T D+   EDGD ID    Q GG
Sbjct: 67  DGRRLRGEQTPDELDMEDGDEIDAMLHQTGG 97


>ref|XP_002321150.1| predicted protein [Populus trichocarpa] gi|222861923|gb|EEE99465.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 44/91 (48%), Positives = 60/91 (65%)
 Frame = +2

Query: 188 EESERKPSLTGQSRKVHLTLKAQDQIEVKFSVKRTVPLQKLMDAYCLERSVEANSFRFLV 367
           +E ++KP+   QS  ++L +K QD  EV F +KR+  L+KLM+AYC  +SVE NS  FL 
Sbjct: 9   QEEDKKPN--DQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVEFNSIAFLF 66

Query: 368 DGQRLKGHRTADDYSFEDGDMIDVFNAQMGG 460
           DG+RL+G +T D+   EDGD ID    Q GG
Sbjct: 67  DGRRLRGEQTPDELDMEDGDEIDAMLHQTGG 97


>ref|XP_002301601.1| predicted protein [Populus trichocarpa] gi|222843327|gb|EEE80874.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 44/91 (48%), Positives = 60/91 (65%)
 Frame = +2

Query: 188 EESERKPSLTGQSRKVHLTLKAQDQIEVKFSVKRTVPLQKLMDAYCLERSVEANSFRFLV 367
           +E ++KP+   QS  ++L +K QD  EV F +KR+  L+KLM+AYC  +SVE NS  FL 
Sbjct: 9   QEEDKKPN--DQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVEFNSIAFLF 66

Query: 368 DGQRLKGHRTADDYSFEDGDMIDVFNAQMGG 460
           DG+RL+G +T D+   EDGD ID    Q GG
Sbjct: 67  DGRRLRGEQTPDELDMEDGDEIDAMLHQTGG 97


>ref|XP_002262911.1| PREDICTED: small ubiquitin-related modifier 2 [Vitis vinifera]
           gi|296090483|emb|CBI40814.3| unnamed protein product
           [Vitis vinifera]
          Length = 103

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 44/91 (48%), Positives = 58/91 (63%)
 Frame = +2

Query: 188 EESERKPSLTGQSRKVHLTLKAQDQIEVKFSVKRTVPLQKLMDAYCLERSVEANSFRFLV 367
           +E ++KP  T Q   ++L +K QD  EV F +KR+  L+KLM AYC  +SVE NS  FL 
Sbjct: 11  QEEDKKP--TDQGAHINLKVKGQDGNEVFFRIKRSTQLRKLMSAYCDRQSVELNSIAFLF 68

Query: 368 DGQRLKGHRTADDYSFEDGDMIDVFNAQMGG 460
           DG+RL+G +T D+   EDGD ID    Q GG
Sbjct: 69  DGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 99


>emb|CAN79327.1| hypothetical protein VITISV_032072 [Vitis vinifera]
          Length = 104

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 44/91 (48%), Positives = 58/91 (63%)
 Frame = +2

Query: 188 EESERKPSLTGQSRKVHLTLKAQDQIEVKFSVKRTVPLQKLMDAYCLERSVEANSFRFLV 367
           +E ++KP  T Q   ++L +K QD  EV F +KR+  L+KLM AYC  +SVE NS  FL 
Sbjct: 11  QEEDKKP--TDQGAHINLKVKGQDGNEVFFRIKRSTQLRKLMSAYCDRQSVELNSIAFLF 68

Query: 368 DGQRLKGHRTADDYSFEDGDMIDVFNAQMGG 460
           DG+RL+G +T D+   EDGD ID    Q GG
Sbjct: 69  DGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 99


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