BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027766
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69144.1| hypothetical protein VITISV_027771 [Vitis vinifera]   110   9e-23
emb|CAN80838.1| hypothetical protein VITISV_042541 [Vitis vinifera]   103   1e-20
gb|ABW81018.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr...   103   1e-20
emb|CAN63372.1| hypothetical protein VITISV_035289 [Vitis vinifera]   103   2e-20
emb|CAN72634.1| hypothetical protein VITISV_007594 [Vitis vinifera]   103   2e-20

>emb|CAN69144.1| hypothetical protein VITISV_027771 [Vitis vinifera]
          Length = 635

 Score =  110 bits (276), Expect = 9e-23
 Identities = 55/116 (47%), Positives = 76/116 (65%)
 Frame = +2

Query: 2   NYVVKRVLVDCGSAVDLLFRGASEEMRIDPGQLRPPRTSLFGFNGSVTEPMGELLLPVTA 181
           ++ VKR+LVD GS+ DLL     ++M   P  L  P  +LFGFNGS T  +G++ LPV A
Sbjct: 489 DFDVKRILVDPGSSADLLQVAVIKQMGFIPSSLENPERTLFGFNGSSTTSLGDVTLPVQA 548

Query: 182 GPVTVFSRFMVVDSSSQYNAILGRRWIHEMRAVPSTYYQVIRFPTPAGTYEVRGDQ 349
           GPV + + F VV+  S +NAILGR W+H M+ VPSTY+Q++ F T  G  ++ G Q
Sbjct: 549 GPVILNALFSVVEDLSPFNAILGRTWLHGMKVVPSTYHQMVSFITQDGQIDLYGSQ 604


>emb|CAN80838.1| hypothetical protein VITISV_042541 [Vitis vinifera]
          Length = 508

 Score =  103 bits (258), Expect = 1e-20
 Identities = 53/116 (45%), Positives = 74/116 (63%)
 Frame = +2

Query: 2   NYVVKRVLVDCGSAVDLLFRGASEEMRIDPGQLRPPRTSLFGFNGSVTEPMGELLLPVTA 181
           ++ V+R+LVD GS+VDL+       M      L  PR  L GFNGS T  +G+++LPV A
Sbjct: 362 DFDVRRILVDPGSSVDLVQASVVGRMGHSLTSLENPRRILPGFNGSSTTSLGDIVLPVQA 421

Query: 182 GPVTVFSRFMVVDSSSQYNAILGRRWIHEMRAVPSTYYQVIRFPTPAGTYEVRGDQ 349
           GPVT+  +F VV   S +N ILGR W+H M+A+PSTY+Q++ F T  G  ++ G Q
Sbjct: 422 GPVTLNVQFSVVQDLSSFNVILGRTWLHYMKAIPSTYHQMVSFLTKDGQIDLYGSQ 477


>gb|ABW81018.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
          Length = 672

 Score =  103 bits (257), Expect = 1e-20
 Identities = 52/116 (44%), Positives = 69/116 (59%)
 Frame = +2

Query: 2   NYVVKRVLVDCGSAVDLLFRGASEEMRIDPGQLRPPRTSLFGFNGSVTEPMGELLLPVTA 181
           N+ V R+L+D GS+VDL+F    E+M I  G +  P + L  F       +G + LPV A
Sbjct: 541 NFEVSRILIDTGSSVDLIFLSTLEKMGISRGDIVGPPSPLVAFTSESAMSLGTIKLPVLA 600

Query: 182 GPVTVFSRFMVVDSSSQYNAILGRRWIHEMRAVPSTYYQVIRFPTPAGTYEVRGDQ 349
             V+    F+V D  + YN ILG  WI+ M+AVPSTYYQ I+FPT  G   +RGDQ
Sbjct: 601 KKVSKIVDFVVFDKPAAYNIILGTPWIYRMKAVPSTYYQCIKFPTSNGVETIRGDQ 656


>emb|CAN63372.1| hypothetical protein VITISV_035289 [Vitis vinifera]
          Length = 549

 Score =  103 bits (256), Expect = 2e-20
 Identities = 52/116 (44%), Positives = 74/116 (63%)
 Frame = +2

Query: 2   NYVVKRVLVDCGSAVDLLFRGASEEMRIDPGQLRPPRTSLFGFNGSVTEPMGELLLPVTA 181
           ++ V+R+LVD GS+VDL+     + M      L  P   L GFNGS T  +G+++LPV A
Sbjct: 403 DFDVRRILVDPGSSVDLVQASVVDRMGHSLAGLENPGRILSGFNGSSTTSLGDIILPVQA 462

Query: 182 GPVTVFSRFMVVDSSSQYNAILGRRWIHEMRAVPSTYYQVIRFPTPAGTYEVRGDQ 349
           GPVT+  +F VV   S +N ILGR W+H M+A+PSTY+Q++ F T  G  ++ G Q
Sbjct: 463 GPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYHQMVSFLTNDGQIDLYGSQ 518


>emb|CAN72634.1| hypothetical protein VITISV_007594 [Vitis vinifera]
          Length = 455

 Score =  103 bits (256), Expect = 2e-20
 Identities = 50/116 (43%), Positives = 74/116 (63%)
 Frame = +2

Query: 2   NYVVKRVLVDCGSAVDLLFRGASEEMRIDPGQLRPPRTSLFGFNGSVTEPMGELLLPVTA 181
           ++ V+R+L+D GS+ DLL       M  D   L  P   L GFNG+ T  +G+++LPV A
Sbjct: 306 DFDVRRILIDLGSSADLLQTSVIGHMGRDLSGLENPGRILSGFNGATTTSLGDIVLPVQA 365

Query: 182 GPVTVFSRFMVVDSSSQYNAILGRRWIHEMRAVPSTYYQVIRFPTPAGTYEVRGDQ 349
           GPVT+  +F+VV   S +NAILGR W+H M+ +PSTY+Q++ F T  G  ++  +Q
Sbjct: 366 GPVTLNVQFLVVQDLSPFNAILGRTWLHYMKVIPSTYHQMVSFLTEDGQIDLHDNQ 421