BLASTX nr result

ID: Coptis24_contig00027760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027760
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282438.1| PREDICTED: uncharacterized protein LOC100267...    97   1e-18
gb|ADU55782.1| HSP27.8 [Citrullus lanatus]                             83   2e-14
ref|XP_002320406.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
gb|ABK95152.1| unknown [Populus trichocarpa]                           83   2e-14
ref|XP_002525886.1| small heat-shock protein, putative [Ricinus ...    78   7e-13

>ref|XP_002282438.1| PREDICTED: uncharacterized protein LOC100267696 [Vitis vinifera]
           gi|302143482|emb|CBI22043.3| unnamed protein product
           [Vitis vinifera]
          Length = 259

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 53/119 (44%), Positives = 77/119 (64%), Gaps = 4/119 (3%)
 Frame = -2

Query: 373 SKPAHMKPEPGIV-QYRPVKQECQLSMEEPPKFARPYRRLLDRPKEVISKKV---KPDGI 206
           SKPA ++P    V   +P+ Q+  L+ E P KFARP +R+    +    KK+   + +GI
Sbjct: 98  SKPARVEPNLSYVGSIQPLPQDFNLATE-PAKFARPSQRVSGSKQFRSKKKIHASEGNGI 156

Query: 205 ELSPSWDVSESGRCYVMSIEFPGVSIENIRVEVDEENLVVTGKRSTEWWRAPNASKDSI 29
           E SP  DV+ESG  YV+++E PGV   +IRVE++ +NL+V GKRST+WW+  + S DSI
Sbjct: 157 EWSPRMDVAESGCNYVVTVELPGVGTNDIRVEINSQNLIVMGKRSTQWWKVASCSNDSI 215


>gb|ADU55782.1| HSP27.8 [Citrullus lanatus]
          Length = 254

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 50/120 (41%), Positives = 69/120 (57%), Gaps = 5/120 (4%)
 Frame = -2

Query: 373 SKPAHMKPEPGIVQYRPVKQECQLSMEEPPKFARPYRRLLDRPKEVISKKVKP----DGI 206
           S+PA     P +   +PV Q   L   EPP FAR    + ++    IS+  +P    +GI
Sbjct: 91  SRPAKEGKIPSVGIEQPVAQNFNLIASEPPLFARACLGINEQNNHFISETKQPSSGSNGI 150

Query: 205 E-LSPSWDVSESGRCYVMSIEFPGVSIENIRVEVDEENLVVTGKRSTEWWRAPNASKDSI 29
             LSP  DV+ESGR YV+++E PGV I +IRVEVD++ L + GKRS ++      S DSI
Sbjct: 151 GGLSPRMDVAESGRGYVLTVEIPGVKINDIRVEVDDQKLTIIGKRSNQYCEVVGYSSDSI 210


>ref|XP_002320406.1| predicted protein [Populus trichocarpa] gi|222861179|gb|EEE98721.1|
           predicted protein [Populus trichocarpa]
          Length = 266

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 52/122 (42%), Positives = 73/122 (59%), Gaps = 7/122 (5%)
 Frame = -2

Query: 373 SKPAHMKPE-PGIVQYRPVKQECQLSMEEPPKFARPYRRLLDRPKEV-ISKKV---KPDG 209
           S+P  MKP  P +       + CQ +M   PKFARP RR ++R  ++   KK+   + +G
Sbjct: 101 SRPTKMKPNLPNVEPTLTPAKYCQSTMSALPKFARPNRRTINRNGQLQFEKKIYSSESNG 160

Query: 208 IELSPSWDVSESGRCYVMSIEFPGVSIENIRVEVDEENLVVTGKRSTEWWR--APNASKD 35
           IE SP  DV ESG  YV+ IE PGV++ +IRVE+  +NL V+GK ST+  +  +   S D
Sbjct: 161 IERSPKMDVVESGVNYVLKIEIPGVNVSDIRVEIHGQNLKVSGKGSTQCCKMASGGCSSD 220

Query: 34  SI 29
           SI
Sbjct: 221 SI 222


>gb|ABK95152.1| unknown [Populus trichocarpa]
          Length = 267

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 52/122 (42%), Positives = 73/122 (59%), Gaps = 7/122 (5%)
 Frame = -2

Query: 373 SKPAHMKPE-PGIVQYRPVKQECQLSMEEPPKFARPYRRLLDRPKEV-ISKKV---KPDG 209
           S+P  MKP  P +       + CQ +M   PKFARP RR ++R  ++   KK+   + +G
Sbjct: 102 SRPTKMKPNLPNVEPTLTPAKYCQSTMSALPKFARPNRRTINRNGQLQFEKKIYSSESNG 161

Query: 208 IELSPSWDVSESGRCYVMSIEFPGVSIENIRVEVDEENLVVTGKRSTEWWR--APNASKD 35
           IE SP  DV ESG  YV+ IE PGV++ +IRVE+  +NL V+GK ST+  +  +   S D
Sbjct: 162 IERSPKMDVVESGVNYVLKIEIPGVNVSDIRVEIHGQNLKVSGKGSTQCCKMASGGCSSD 221

Query: 34  SI 29
           SI
Sbjct: 222 SI 223


>ref|XP_002525886.1| small heat-shock protein, putative [Ricinus communis]
           gi|223534800|gb|EEF36490.1| small heat-shock protein,
           putative [Ricinus communis]
          Length = 249

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 51/121 (42%), Positives = 67/121 (55%), Gaps = 21/121 (17%)
 Frame = -2

Query: 328 RPVKQECQLSMEEP----------------PKFARPYRRLLDRPKEVISKKV-----KPD 212
           RP K    LS  EP                P FARP    + R K+  SKK      + +
Sbjct: 91  RPTKMGQNLSNAEPIQSPAKACKSFVSSDLPNFARP-STCIGRKKQSDSKKKICSPSQTN 149

Query: 211 GIELSPSWDVSESGRCYVMSIEFPGVSIENIRVEVDEENLVVTGKRSTEWWRAPNASKDS 32
           GIE SP  DV+ESGR YV+++E PGV++ +IRVEV+++NL + GKRST+ W     S DS
Sbjct: 150 GIEWSPRMDVAESGRSYVVTVELPGVNVNDIRVEVNDQNLTIMGKRSTQSW-----SNDS 204

Query: 31  I 29
           I
Sbjct: 205 I 205


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