BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027744
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15973.3| unnamed protein product [Vitis vinifera]               58   7e-07
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi...    58   7e-07
emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]    58   7e-07
ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containi...    55   6e-06
ref|XP_002314110.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>emb|CBI15973.3| unnamed protein product [Vitis vinifera]
          Length = 652

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/72 (40%), Positives = 44/72 (61%)
 Frame = +2

Query: 77  PQILPLIQNIQTQQLDFKTLHAHTITSGLFHDPFTSSRLVEFCFNSKHANLTYGQLIFKS 256
           P +  + Q  +T+QL  K +HA  + +GLF DPF++SRL+     S   +L Y Q +F  
Sbjct: 37  PTLSLIDQCSETKQL--KQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQ 94

Query: 257 ISYPDLYTWNAV 292
           I +P+LYTWN +
Sbjct: 95  IPHPNLYTWNTL 106


>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/72 (40%), Positives = 44/72 (61%)
 Frame = +2

Query: 77  PQILPLIQNIQTQQLDFKTLHAHTITSGLFHDPFTSSRLVEFCFNSKHANLTYGQLIFKS 256
           P +  + Q  +T+QL  K +HA  + +GLF DPF++SRL+     S   +L Y Q +F  
Sbjct: 37  PTLSLIDQCSETKQL--KQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQ 94

Query: 257 ISYPDLYTWNAV 292
           I +P+LYTWN +
Sbjct: 95  IPHPNLYTWNTL 106


>emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
          Length = 694

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/72 (40%), Positives = 44/72 (61%)
 Frame = +2

Query: 77  PQILPLIQNIQTQQLDFKTLHAHTITSGLFHDPFTSSRLVEFCFNSKHANLTYGQLIFKS 256
           P +  + Q  +T+QL  K +HA  + +GLF DPF++SRL+     S   +L Y Q +F  
Sbjct: 37  PTLSLIDQCSETKQL--KQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQ 94

Query: 257 ISYPDLYTWNAV 292
           I +P+LYTWN +
Sbjct: 95  IPHPNLYTWNTL 106


>ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Glycine max]
          Length = 534

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/79 (32%), Positives = 43/79 (54%)
 Frame = +2

Query: 56  LQSFHAPPQILPLIQNIQTQQLDFKTLHAHTITSGLFHDPFTSSRLVEFCFNSKHANLTY 235
           +  F +    L ++Q   T   D + +HAH I +GL H    +SR++ FC +S   ++ Y
Sbjct: 18  IAKFISDQPCLTMLQTQCTNMKDLQKIHAHIIKTGLAHHTVAASRVLTFCASSS-GDINY 76

Query: 236 GQLIFKSISYPDLYTWNAV 292
             L+F +I  P+LY WN +
Sbjct: 77  AYLLFTTIPSPNLYCWNTI 95


>ref|XP_002314110.1| predicted protein [Populus trichocarpa] gi|222850518|gb|EEE88065.1|
           predicted protein [Populus trichocarpa]
          Length = 738

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/72 (34%), Positives = 41/72 (56%)
 Frame = +2

Query: 77  PQILPLIQNIQTQQLDFKTLHAHTITSGLFHDPFTSSRLVEFCFNSKHANLTYGQLIFKS 256
           P  +P++ +    +   K LHAH + +GLF DP ++++L   C  S  ++L Y   +F  
Sbjct: 30  PSTVPILIDKCANKKHLKQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQ 89

Query: 257 ISYPDLYTWNAV 292
           I  P+LYTWN +
Sbjct: 90  IPRPNLYTWNTL 101