BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027737
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20118.3| unnamed protein product [Vitis vinifera]              293   3e-77
emb|CAN62870.1| hypothetical protein VITISV_015928 [Vitis vinifera]   285   7e-75
dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Gl...   262   4e-68
emb|CAN69553.1| hypothetical protein VITISV_009018 [Vitis vinifera]   241   1e-61
emb|CAN61323.1| hypothetical protein VITISV_012107 [Vitis vinifera]   239   4e-61

>emb|CBI20118.3| unnamed protein product [Vitis vinifera]
          Length = 1354

 Score =  293 bits (749), Expect = 3e-77
 Identities = 142/204 (69%), Positives = 169/204 (82%)
 Frame = +2

Query: 5    ERQLDKKMKIIRSDRSGEFYGRYDEIGQHRSLFAKLLECLGICAQYTMSGSPWQNGVAKR 184
            ERQLDKK+KI+RSD+ GE+YGRYDE GQ+   FAK LE  GI AQYTM G+P QNGVA+R
Sbjct: 918  ERQLDKKIKIVRSDQGGEYYGRYDESGQNPGPFAKFLEKHGIRAQYTMPGTPQQNGVAER 977

Query: 185  RNRILMNMVRSMISNSNLPISLWMHALRTAVYILNRVPSKAVPKTPSELWKGWKSSLRHL 364
            RNR LM MVRSM+S S++PISLW  AL+TA+YILNRVPSKAVPKTP ELW G K SLRH+
Sbjct: 978  RNRTLMEMVRSMMSYSSVPISLWGEALKTAMYILNRVPSKAVPKTPFELWTGRKPSLRHI 1037

Query: 365  HIWGFPAEGRVYNLQERKLDPKTISGFFIGYPEKSKRYKFYYFNHTTRIVETGNAKFIEN 544
            HIWG PAE R+YN  E+KLD +T+SG+FIGYP+KSK Y+FY  NH+ RIVETGNA+F+EN
Sbjct: 1038 HIWGCPAEARIYNPHEKKLDSRTVSGYFIGYPDKSKGYRFYCPNHSVRIVETGNARFLEN 1097

Query: 545  GEVSGSDRIKKVVIQEIRVQFPIP 616
            GE+SGS+  +KV I+EIRV  P P
Sbjct: 1098 GEISGSNEPRKVDIEEIRVDIPPP 1121


>emb|CAN62870.1| hypothetical protein VITISV_015928 [Vitis vinifera]
          Length = 764

 Score =  285 bits (728), Expect = 7e-75
 Identities = 139/204 (68%), Positives = 165/204 (80%), Gaps = 1/204 (0%)
 Frame = +2

Query: 8    RQLDKKMKIIRSDRSGEFYGRYDEIGQHRSLFAKLLECLGICAQYTMSGSPWQNGVAKRR 187
            RQLDK++KIIRS+R GE+YGRYD +GQ    FA LLE  GICAQYTM G P QNGVAK+ 
Sbjct: 445  RQLDKRVKIIRSNRGGEYYGRYDGLGQRPGPFAILLEKHGICAQYTMPGMPQQNGVAKKX 504

Query: 188  NRILMNMVRSMISNSNLPISLWMHALRTAVYILNRVPSKAVPKTPSELWKGWKSSLRHLH 367
            N  LM+MVRSM+SNS+LPISLWM AL+T VY+LNRVP+K  PKTP ELW   K SLRHLH
Sbjct: 505  NCTLMDMVRSMLSNSSLPISLWMEALKTVVYLLNRVPTKTXPKTPFELWTRRKPSLRHLH 564

Query: 368  IWGFPAEGRVYNLQERKLDPKTISGFFIGYPEKSKRYKFYYFNHTTRIVETGNAKFIENG 547
            +WG P EGR+Y+  E+KLD KTISG+FI YP KSK Y+FYY NH+T+IVETGN +FIENG
Sbjct: 565  VWGCPTEGRIYSPHEKKLDFKTISGYFIDYPMKSKGYRFYYPNHSTKIVETGNXRFIENG 624

Query: 548  EVSGSDRI-KKVVIQEIRVQFPIP 616
            E+ GSD++ KK  IQE+RVQ P+P
Sbjct: 625  EIRGSDQLQKKTNIQEVRVQVPLP 648


>dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Glycine max]
          Length = 1321

 Score =  262 bits (670), Expect = 4e-68
 Identities = 127/190 (66%), Positives = 155/190 (81%)
 Frame = +2

Query: 5    ERQLDKKMKIIRSDRSGEFYGRYDEIGQHRSLFAKLLECLGICAQYTMSGSPWQNGVAKR 184
            E Q  K++KI+RSDR GE+YGRY E GQ    FAK L+  GI AQYTM GSP QNGVA+R
Sbjct: 503  ENQCGKQIKIVRSDRGGEYYGRYTENGQAPGPFAKFLQEHGIVAQYTMPGSPNQNGVAER 562

Query: 185  RNRILMNMVRSMISNSNLPISLWMHALRTAVYILNRVPSKAVPKTPSELWKGWKSSLRHL 364
            RNR L++MVRSM+SNSNLP SLW  AL+TA YILNRVP+KAVPKTP EL+KGWK SL+H+
Sbjct: 563  RNRTLLDMVRSMLSNSNLPKSLWAEALKTAAYILNRVPTKAVPKTPFELFKGWKPSLKHM 622

Query: 365  HIWGFPAEGRVYNLQERKLDPKTISGFFIGYPEKSKRYKFYYFNHTTRIVETGNAKFIEN 544
             +WG P+E R+YN QE+KLDP+TISG+FIGY E+SK Y+FY  +H TRIVE+ NAKFIEN
Sbjct: 623  RVWGCPSEVRIYNPQEKKLDPRTISGYFIGYAERSKGYRFYCPHHITRIVESRNAKFIEN 682

Query: 545  GEVSGSDRIK 574
              +SGSD+++
Sbjct: 683  DLISGSDQLR 692


>emb|CAN69553.1| hypothetical protein VITISV_009018 [Vitis vinifera]
          Length = 635

 Score =  241 bits (614), Expect = 1e-61
 Identities = 120/193 (62%), Positives = 149/193 (77%)
 Frame = +2

Query: 5   ERQLDKKMKIIRSDRSGEFYGRYDEIGQHRSLFAKLLECLGICAQYTMSGSPWQNGVAKR 184
           E+Q  K++KI+RS+RSGE+YGRY E GQ     AK L+  GI AQYTM GSP QN VAKR
Sbjct: 312 EKQCGKQIKIVRSNRSGEYYGRYLEDGQSPGPLAKFLQEHGIVAQYTMPGSPDQNSVAKR 371

Query: 185 RNRILMNMVRSMISNSNLPISLWMHALRTAVYILNRVPSKAVPKTPSELWKGWKSSLRHL 364
           RNR L++MVRSM+S+S LP  LW  AL+T VYILNRVP+KAVPKTP EL KGWK SL+H+
Sbjct: 372 RNRTLLDMVRSMLSSSKLPQFLWTEALQTIVYILNRVPTKAVPKTPFELLKGWKPSLQHM 431

Query: 365 HIWGFPAEGRVYNLQERKLDPKTISGFFIGYPEKSKRYKFYYFNHTTRIVETGNAKFIEN 544
            +WG  +  R+YN QE+KLDP+TISG+FIGY + SK Y+FY  +H TRIVE+ NAKF+E 
Sbjct: 432 RVWGCSSVVRIYNPQEKKLDPRTISGYFIGYAKNSKGYRFYCPSHNTRIVESRNAKFLEY 491

Query: 545 GEVSGSDRIKKVV 583
             VSGSD+ + +V
Sbjct: 492 DLVSGSDQFRNIV 504


>emb|CAN61323.1| hypothetical protein VITISV_012107 [Vitis vinifera]
          Length = 1077

 Score =  239 bits (610), Expect = 4e-61
 Identities = 118/193 (61%), Positives = 148/193 (76%)
 Frame = +2

Query: 5   ERQLDKKMKIIRSDRSGEFYGRYDEIGQHRSLFAKLLECLGICAQYTMSGSPWQNGVAKR 184
           E+Q  K++KI+RSDR GE+YGRY E GQ    F K L+  GI AQYTM GSP QNGV +R
Sbjct: 223 EKQCGKQIKIVRSDRGGEYYGRYLEDGQSPGPFMKFLQEHGIVAQYTMLGSPNQNGVVER 282

Query: 185 RNRILMNMVRSMISNSNLPISLWMHALRTAVYILNRVPSKAVPKTPSELWKGWKSSLRHL 364
           RNR L++MVRSM++NS LP  LW+ AL+ AVYILN+V +KA+PKTP ELWKGWK SLRH+
Sbjct: 283 RNRTLLDMVRSMLNNSKLPRFLWIEALKKAVYILNQVLTKAIPKTPFELWKGWKPSLRHM 342

Query: 365 HIWGFPAEGRVYNLQERKLDPKTISGFFIGYPEKSKRYKFYYFNHTTRIVETGNAKFIEN 544
            +WG  +E R+YN QE+KLDP+TISG+FIGY EK K Y FY  +H TRIVE+ NAKF++ 
Sbjct: 343 RVWGCLSEVRIYNPQEKKLDPRTISGYFIGYVEKFKGYIFYCPSHNTRIVESRNAKFMKY 402

Query: 545 GEVSGSDRIKKVV 583
             VSG D+ + +V
Sbjct: 403 DLVSGIDQFRNIV 415