BLASTX nr result

ID: Coptis24_contig00027729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027729
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEI84329.1| lectin-domain receptor-like kinase [Nicotiana att...   109   3e-22
ref|XP_003632253.1| PREDICTED: G-type lectin S-receptor-like ser...   105   5e-21
ref|XP_003633280.1| PREDICTED: G-type lectin S-receptor-like ser...   102   2e-20
emb|CBI22034.3| unnamed protein product [Vitis vinifera]              102   2e-20
emb|CAE05335.2| OSJNBa0079M09.4 [Oryza sativa Japonica Group]          99   4e-19

>gb|AEI84329.1| lectin-domain receptor-like kinase [Nicotiana attenuata]
          Length = 830

 Score =  109 bits (272), Expect = 3e-22
 Identities = 53/99 (53%), Positives = 67/99 (67%), Gaps = 3/99 (3%)
 Frame = -1

Query: 288 SSSIQFLKFGPDGHLKVYD---RLNVVADLLTIQYYGDCGYPLFCGSYGICSSGQCSCSD 118
           +SS Q++K   DGHLKVY+   R N V DLLT  + G+C YP+ CG YGICS GQCSC  
Sbjct: 274 ASSAQYMKLESDGHLKVYEWQSRWNEVNDLLT-GFNGECYYPMICGRYGICSRGQCSCPK 332

Query: 117 VASNGTSYFSPVDERQPNLGCRRITPLSCEPHDSHDLLE 1
            +SN TSYF  +D+RQ NLGC  +T L+C   ++H  LE
Sbjct: 333 SSSNSTSYFRQIDDRQGNLGCAEVTRLTCNALNNHRFLE 371


>ref|XP_003632253.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein
           kinase SD2-5-like [Vitis vinifera]
          Length = 832

 Score =  105 bits (261), Expect = 5e-21
 Identities = 48/97 (49%), Positives = 63/97 (64%), Gaps = 3/97 (3%)
 Frame = -1

Query: 282 SIQFLKFGPDGHLKVYDRLNV---VADLLTIQYYGDCGYPLFCGSYGICSSGQCSCSDVA 112
           S Q+++ G DGHL+V+         A  LT ++  +C YPL CG YGICS+GQC+C   +
Sbjct: 269 SAQYMRLGSDGHLRVFQWQETGWQEAVDLTDEFLTECDYPLACGKYGICSAGQCTCPGAS 328

Query: 111 SNGTSYFSPVDERQPNLGCRRITPLSCEPHDSHDLLE 1
            NGT YF P++ERQ NLGC  ITP+SC+    H LLE
Sbjct: 329 DNGTIYFRPINERQTNLGCSAITPISCQLSQYHSLLE 365


>ref|XP_003633280.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein
           kinase SD2-5-like [Vitis vinifera]
          Length = 848

 Score =  102 bits (255), Expect = 2e-20
 Identities = 52/101 (51%), Positives = 62/101 (61%), Gaps = 4/101 (3%)
 Frame = -1

Query: 291 ASSSIQFLKFGPDGHLKVYD----RLNVVADLLTIQYYGDCGYPLFCGSYGICSSGQCSC 124
           A+ S QF+K  PDGHL+VY+        VADLL     G+C YPL CG YGICS  QCSC
Sbjct: 272 AALSSQFMKLDPDGHLRVYEWRESEWKEVADLLQTNE-GNCEYPLSCGKYGICSDEQCSC 330

Query: 123 SDVASNGTSYFSPVDERQPNLGCRRITPLSCEPHDSHDLLE 1
              +SN   YF PVD+R PNLGC  IT +SC     + L+E
Sbjct: 331 PGDSSNAAKYFRPVDDRLPNLGCSEITSISCLSSQYYSLME 371


>emb|CBI22034.3| unnamed protein product [Vitis vinifera]
          Length = 830

 Score =  102 bits (255), Expect = 2e-20
 Identities = 52/101 (51%), Positives = 62/101 (61%), Gaps = 4/101 (3%)
 Frame = -1

Query: 291 ASSSIQFLKFGPDGHLKVYD----RLNVVADLLTIQYYGDCGYPLFCGSYGICSSGQCSC 124
           A+ S QF+K  PDGHL+VY+        VADLL     G+C YPL CG YGICS  QCSC
Sbjct: 272 AALSSQFMKLDPDGHLRVYEWRESEWKEVADLLQTNE-GNCEYPLSCGKYGICSDEQCSC 330

Query: 123 SDVASNGTSYFSPVDERQPNLGCRRITPLSCEPHDSHDLLE 1
              +SN   YF PVD+R PNLGC  IT +SC     + L+E
Sbjct: 331 PGDSSNAAKYFRPVDDRLPNLGCSEITSISCLSSQYYSLME 371


>emb|CAE05335.2| OSJNBa0079M09.4 [Oryza sativa Japonica Group]
          Length = 838

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 45/101 (44%), Positives = 68/101 (67%), Gaps = 6/101 (5%)
 Frame = -1

Query: 288 SSSIQFLKFGPDGHLKVYDRLN------VVADLLTIQYYGDCGYPLFCGSYGICSSGQCS 127
           +SS Q+++   DGHL++Y+  N      VV+D++ + +  DC +P+ CG YGIC+ GQC+
Sbjct: 278 ASSTQYMRLEFDGHLRLYEWSNTGAKWTVVSDVIKV-FPDDCAFPMACGKYGICTGGQCT 336

Query: 126 CSDVASNGTSYFSPVDERQPNLGCRRITPLSCEPHDSHDLL 4
           C   +++  SYF PVDER+ NLGC  +TP+SC+   SH LL
Sbjct: 337 CPLQSNSSLSYFKPVDERKANLGCSPLTPISCQEMRSHQLL 377


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