BLASTX nr result

ID: Coptis24_contig00027728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027728
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY15214.1| TGA10 transcription factor [Nicotiana tabacum]         106   2e-21
ref|XP_003521195.1| PREDICTED: transcription factor HBP-1b(c1)-l...   104   7e-21
ref|XP_003625220.1| Transcription factor, putative [Medicago tru...   102   3e-20
ref|XP_003625219.1| Transcription factor, putative [Medicago tru...   102   3e-20
gb|ABN08651.1| cAMP response element binding (CREB) protein [Med...   102   3e-20

>gb|AAY15214.1| TGA10 transcription factor [Nicotiana tabacum]
          Length = 506

 Score =  106 bits (265), Expect = 2e-21
 Identities = 58/78 (74%), Positives = 68/78 (87%), Gaps = 2/78 (2%)
 Frame = +2

Query: 71  ISFGMMQ-SSASIPGNFITSKDPSGAYDLGELDQALFLYLQSQDNHPSSVQDQRQSSGIR 247
           +SFGMMQ SS++IPG+ I SKD +GAYDLGELDQALF YL  Q+  PSS+Q+QRQ+SG+R
Sbjct: 70  VSFGMMQQSSSAIPGSLI-SKDSAGAYDLGELDQALFQYLDGQE--PSSIQEQRQNSGMR 126

Query: 248 -PTLNIFPSQPMHVEPST 298
            PTLNIFPSQPMHVEPST
Sbjct: 127 PPTLNIFPSQPMHVEPST 144


>ref|XP_003521195.1| PREDICTED: transcription factor HBP-1b(c1)-like [Glycine max]
          Length = 491

 Score =  104 bits (260), Expect = 7e-21
 Identities = 61/84 (72%), Positives = 70/84 (83%), Gaps = 6/84 (7%)
 Frame = +2

Query: 71  ISFGMMQSSAS---IPGNFITSKDPSGAYDLGELDQALFLYLQSQDNHPSSVQDQRQ--S 235
           ISFG+MQSS+S   IPGN++ SKD SGAYDLGELDQA FLYL  Q + PSSVQDQRQ  S
Sbjct: 53  ISFGLMQSSSSSSSIPGNYLGSKD-SGAYDLGELDQAFFLYLDGQAD-PSSVQDQRQNSS 110

Query: 236 SGIR-PTLNIFPSQPMHVEPSTKE 304
           SG+R PTLNIFPS+PMHVEPS+ +
Sbjct: 111 SGMRPPTLNIFPSKPMHVEPSSSK 134


>ref|XP_003625220.1| Transcription factor, putative [Medicago truncatula]
           gi|355500235|gb|AES81438.1| Transcription factor,
           putative [Medicago truncatula]
          Length = 439

 Score =  102 bits (255), Expect = 3e-20
 Identities = 60/81 (74%), Positives = 69/81 (85%), Gaps = 5/81 (6%)
 Frame = +2

Query: 71  ISFGMMQSSAS--IPGNFITSKDPSGAYDLGELDQALFLYLQSQDNHPSSVQDQRQ--SS 238
           ISFGMMQSS+S  + GN+I +KD SGAYDLGELDQALFLYL  Q + PSSVQDQ+Q  +S
Sbjct: 44  ISFGMMQSSSSPSVLGNYIRNKD-SGAYDLGELDQALFLYLNGQTD-PSSVQDQKQNSTS 101

Query: 239 GIR-PTLNIFPSQPMHVEPST 298
           G+R PTLNIFPSQPMHVEPS+
Sbjct: 102 GMRPPTLNIFPSQPMHVEPSS 122


>ref|XP_003625219.1| Transcription factor, putative [Medicago truncatula]
           gi|355500234|gb|AES81437.1| Transcription factor,
           putative [Medicago truncatula]
          Length = 465

 Score =  102 bits (255), Expect = 3e-20
 Identities = 60/81 (74%), Positives = 69/81 (85%), Gaps = 5/81 (6%)
 Frame = +2

Query: 71  ISFGMMQSSAS--IPGNFITSKDPSGAYDLGELDQALFLYLQSQDNHPSSVQDQRQ--SS 238
           ISFGMMQSS+S  + GN+I +KD SGAYDLGELDQALFLYL  Q + PSSVQDQ+Q  +S
Sbjct: 44  ISFGMMQSSSSPSVLGNYIRNKD-SGAYDLGELDQALFLYLNGQTD-PSSVQDQKQNSTS 101

Query: 239 GIR-PTLNIFPSQPMHVEPST 298
           G+R PTLNIFPSQPMHVEPS+
Sbjct: 102 GMRPPTLNIFPSQPMHVEPSS 122


>gb|ABN08651.1| cAMP response element binding (CREB) protein [Medicago truncatula]
          Length = 476

 Score =  102 bits (255), Expect = 3e-20
 Identities = 60/81 (74%), Positives = 69/81 (85%), Gaps = 5/81 (6%)
 Frame = +2

Query: 71  ISFGMMQSSAS--IPGNFITSKDPSGAYDLGELDQALFLYLQSQDNHPSSVQDQRQ--SS 238
           ISFGMMQSS+S  + GN+I +KD SGAYDLGELDQALFLYL  Q + PSSVQDQ+Q  +S
Sbjct: 44  ISFGMMQSSSSPSVLGNYIRNKD-SGAYDLGELDQALFLYLNGQTD-PSSVQDQKQNSTS 101

Query: 239 GIR-PTLNIFPSQPMHVEPST 298
           G+R PTLNIFPSQPMHVEPS+
Sbjct: 102 GMRPPTLNIFPSQPMHVEPSS 122


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