BLASTX nr result

ID: Coptis24_contig00027714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027714
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534730.1| protein binding protein, putative [Ricinus c...    98   6e-19
ref|XP_002313454.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_002281519.2| PREDICTED: uncharacterized protein LOC100248...    89   5e-16
emb|CBI16203.3| unnamed protein product [Vitis vinifera]               89   5e-16
ref|XP_002298379.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16

>ref|XP_002534730.1| protein binding protein, putative [Ricinus communis]
           gi|223524670|gb|EEF27653.1| protein binding protein,
           putative [Ricinus communis]
          Length = 630

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 45/77 (58%), Positives = 61/77 (79%)
 Frame = -1

Query: 508 FKKFNSAFETTYRTQSSWVVPDSKLRDVIEVSVCKNIVPAYTQFYEKYRVLLKHSRNVIK 329
           FK+FN AFE TY+ QSSWVVPD+KLRD I+VSV + IVP Y +FYEK+RV+++ S  +++
Sbjct: 528 FKRFNLAFEDTYKKQSSWVVPDAKLRDEIKVSVARKIVPVYREFYEKFRVVVR-SVGIVR 586

Query: 328 FTPDELTNQISGLFYEN 278
           F PD+L N +S LF+ N
Sbjct: 587 FAPDDLENYLSDLFFGN 603


>ref|XP_002313454.1| predicted protein [Populus trichocarpa] gi|222849862|gb|EEE87409.1|
           predicted protein [Populus trichocarpa]
          Length = 597

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 39/75 (52%), Positives = 53/75 (70%)
 Frame = -1

Query: 508 FKKFNSAFETTYRTQSSWVVPDSKLRDVIEVSVCKNIVPAYTQFYEKYRVLLKHSRNVIK 329
           FK+FNS+FE  Y  Q+SWVV DSKLRD I+VSV + +VP Y +FY KYR L+     +++
Sbjct: 490 FKRFNSSFEEAYNNQASWVVSDSKLRDQIKVSVARKLVPVYREFYGKYRQLVARKEGIVR 549

Query: 328 FTPDELTNQISGLFY 284
           F PD+L N +S L +
Sbjct: 550 FAPDDLENYLSDLLF 564


>ref|XP_002281519.2| PREDICTED: uncharacterized protein LOC100248374 [Vitis vinifera]
          Length = 621

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 41/78 (52%), Positives = 56/78 (71%), Gaps = 3/78 (3%)
 Frame = -1

Query: 508 FKKFNSAFETTYRTQSSWVVPDSKLRDVIEVSVCKNIVPAYTQFYEKYRVLLKH---SRN 338
           FKKFNSAFE  YR Q+SWVVPD+KL++ I++S+ K + P Y  FYEK R  L+    S +
Sbjct: 522 FKKFNSAFEEVYRKQTSWVVPDNKLQEEIKLSIAKKLEPTYRAFYEKNRARLRREPGSES 581

Query: 337 VIKFTPDELTNQISGLFY 284
           V++F PD++ N +S LFY
Sbjct: 582 VVRFAPDDMGNYLSDLFY 599


>emb|CBI16203.3| unnamed protein product [Vitis vinifera]
          Length = 540

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 41/78 (52%), Positives = 56/78 (71%), Gaps = 3/78 (3%)
 Frame = -1

Query: 508 FKKFNSAFETTYRTQSSWVVPDSKLRDVIEVSVCKNIVPAYTQFYEKYRVLLKH---SRN 338
           FKKFNSAFE  YR Q+SWVVPD+KL++ I++S+ K + P Y  FYEK R  L+    S +
Sbjct: 379 FKKFNSAFEEVYRKQTSWVVPDNKLQEEIKLSIAKKLEPTYRAFYEKNRARLRREPGSES 438

Query: 337 VIKFTPDELTNQISGLFY 284
           V++F PD++ N +S LFY
Sbjct: 439 VVRFAPDDMGNYLSDLFY 456


>ref|XP_002298379.1| predicted protein [Populus trichocarpa] gi|222845637|gb|EEE83184.1|
           predicted protein [Populus trichocarpa]
          Length = 595

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 38/75 (50%), Positives = 53/75 (70%)
 Frame = -1

Query: 508 FKKFNSAFETTYRTQSSWVVPDSKLRDVIEVSVCKNIVPAYTQFYEKYRVLLKHSRNVIK 329
           F  FNS+FE  Y  Q+SWVV DSKLRD I++SV + +VPAY +FYEKYR ++     +++
Sbjct: 490 FNSFNSSFEEAYNKQASWVVSDSKLRDQIKLSVARKLVPAYREFYEKYRQVVVRKEGIVR 549

Query: 328 FTPDELTNQISGLFY 284
           F PD+L N +S L +
Sbjct: 550 FAPDDLENYLSDLLF 564


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