BLASTX nr result
ID: Coptis24_contig00027703
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00027703 (385 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFP55590.1| hypothetical protein [Rosa rugosa] 77 2e-12 ref|XP_002318466.1| predicted protein [Populus trichocarpa] gi|2... 75 4e-12 ref|XP_003602325.1| hypothetical protein MTR_3g092200 [Medicago ... 69 4e-10 ref|XP_002985519.1| hypothetical protein SELMODRAFT_13526 [Selag... 59 4e-07 ref|XP_002991958.1| hypothetical protein SELMODRAFT_2723 [Selagi... 59 4e-07 >gb|AFP55590.1| hypothetical protein [Rosa rugosa] Length = 333 Score = 76.6 bits (187), Expect = 2e-12 Identities = 36/57 (63%), Positives = 44/57 (77%) Frame = -3 Query: 173 GGDAILCTYPLFGTIIFGTFATAYILLFLLSSFKVVALVINKGLRIRIYALALSVLV 3 G +LC YPL T+IFG FA Y + FL S +KV+ALVINKGLR+RIYALA++VLV Sbjct: 191 GNKVVLCKYPLLSTVIFGAFAVTYFMWFLFSLWKVLALVINKGLRMRIYALAVTVLV 247 >ref|XP_002318466.1| predicted protein [Populus trichocarpa] gi|222859139|gb|EEE96686.1| predicted protein [Populus trichocarpa] Length = 317 Score = 75.5 bits (184), Expect = 4e-12 Identities = 40/79 (50%), Positives = 48/79 (60%) Frame = -3 Query: 239 SKTHFPQVFWETYVVLKGSGVGGGDAILCTYPLFGTIIFGTFATAYILLFLLSSFKVVAL 60 S P +F + VV K + G + ++CTYPL IIFG F Y L F LS FKVV L Sbjct: 162 SMVKMPSIFHRSSVVFKNNF--GVEIVMCTYPLISCIIFGAFGVWYTLFFFLSCFKVVTL 219 Query: 59 VINKGLRIRIYALALSVLV 3 INKGLR RIY+LA V+V Sbjct: 220 AINKGLRARIYSLAFVVMV 238 >ref|XP_003602325.1| hypothetical protein MTR_3g092200 [Medicago truncatula] gi|355491373|gb|AES72576.1| hypothetical protein MTR_3g092200 [Medicago truncatula] Length = 329 Score = 68.9 bits (167), Expect = 4e-10 Identities = 44/115 (38%), Positives = 59/115 (51%), Gaps = 1/115 (0%) Frame = -3 Query: 344 IKQKDPNDKFGSAVATVXXXXXXXXXXXXXXXXXASKTH-FPQVFWETYVVLKGSGVGGG 168 I++K PND G AV V H P + +T+V+L+ Sbjct: 129 IRKKTPND--GWAVTFVFSTCLPLGILQGLLVYFNPLEHRVPALLRQTFVILED------ 180 Query: 167 DAILCTYPLFGTIIFGTFATAYILLFLLSSFKVVALVINKGLRIRIYALALSVLV 3 D +LC YP +++F F+ AY L S +KV++LVINKGLRIRIYAL VLV Sbjct: 181 DTVLCAYPFLNSVVFAAFSAAYCAWLLFSCWKVLSLVINKGLRIRIYALGSVVLV 235 >ref|XP_002985519.1| hypothetical protein SELMODRAFT_13526 [Selaginella moellendorffii] gi|300146725|gb|EFJ13393.1| hypothetical protein SELMODRAFT_13526 [Selaginella moellendorffii] Length = 320 Score = 58.9 bits (141), Expect = 4e-07 Identities = 24/52 (46%), Positives = 37/52 (71%) Frame = -3 Query: 164 AILCTYPLFGTIIFGTFATAYILLFLLSSFKVVALVINKGLRIRIYALALSV 9 A +CTYPL T++ G F Y++ FL +K+ ALVIN+ L++R+YAL ++V Sbjct: 212 AAVCTYPLLSTVVLGMFGCVYVIYFLYLGWKMAALVINRRLQLRVYALVIAV 263 >ref|XP_002991958.1| hypothetical protein SELMODRAFT_2723 [Selaginella moellendorffii] gi|300140200|gb|EFJ06926.1| hypothetical protein SELMODRAFT_2723 [Selaginella moellendorffii] Length = 320 Score = 58.9 bits (141), Expect = 4e-07 Identities = 24/52 (46%), Positives = 37/52 (71%) Frame = -3 Query: 164 AILCTYPLFGTIIFGTFATAYILLFLLSSFKVVALVINKGLRIRIYALALSV 9 A +CTYPL T++ G F Y++ FL +K+ ALVIN+ L++R+YAL ++V Sbjct: 212 AAVCTYPLLSTVVLGMFGCVYVIYFLYLGWKMAALVINRRLQLRVYALVIAV 263