BLASTX nr result

ID: Coptis24_contig00027698 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027698
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004166148.1| PREDICTED: uncharacterized protein LOC101229...   236   3e-60
ref|XP_004149818.1| PREDICTED: uncharacterized protein LOC101221...   236   3e-60
emb|CAN77499.1| hypothetical protein VITISV_002404 [Vitis vinifera]   228   5e-58
ref|XP_003635227.1| PREDICTED: uncharacterized protein LOC100852...   228   9e-58
ref|XP_002315250.1| predicted protein [Populus trichocarpa] gi|2...   223   3e-56

>ref|XP_004166148.1| PREDICTED: uncharacterized protein LOC101229995 [Cucumis sativus]
          Length = 329

 Score =  236 bits (601), Expect = 3e-60
 Identities = 117/163 (71%), Positives = 134/163 (82%), Gaps = 2/163 (1%)
 Frame = -2

Query: 603 LPFLTGLGGSTNTLVQXXXXXXXXXXXGL--PSVNGAQLPGGTTVQKLMFGTMTVIDDEL 430
           LPFL GLGG+ + L+Q            L  PSVN  QLP G +VQ+L+FGTMTVIDDEL
Sbjct: 166 LPFLIGLGGAASPLLQNSNGGGNNFNGQLGFPSVNAGQLPSGVSVQQLLFGTMTVIDDEL 225

Query: 429 TEGHELGSGLVGKAQGFYVVSSEDGSSQTMAFTAMFESGSYVDSISFFGVHLTAVSESQI 250
           TEGHELGSGL+GKAQGFYVVSSEDG+SQTMAFT MFESG YVDS+SFFGVH TAVSES +
Sbjct: 226 TEGHELGSGLIGKAQGFYVVSSEDGNSQTMAFTTMFESGHYVDSLSFFGVHRTAVSESHL 285

Query: 249 GIMGGTGKYVNAKGFATVKTIPSTNQHDTDGVETLLEFTVYLA 121
            IMGGTGKYVNA+G+A VKT+P  NQH+TDGVETLL+FTVY++
Sbjct: 286 AIMGGTGKYVNARGYANVKTLPGINQHETDGVETLLQFTVYIS 328


>ref|XP_004149818.1| PREDICTED: uncharacterized protein LOC101221251 [Cucumis sativus]
          Length = 329

 Score =  236 bits (601), Expect = 3e-60
 Identities = 117/163 (71%), Positives = 134/163 (82%), Gaps = 2/163 (1%)
 Frame = -2

Query: 603 LPFLTGLGGSTNTLVQXXXXXXXXXXXGL--PSVNGAQLPGGTTVQKLMFGTMTVIDDEL 430
           LPFL GLGG+ + L+Q            L  PSVN  QLP G +VQ+L+FGTMTVIDDEL
Sbjct: 166 LPFLIGLGGAASPLLQNSNGGGNNFNGQLGFPSVNAGQLPSGVSVQQLLFGTMTVIDDEL 225

Query: 429 TEGHELGSGLVGKAQGFYVVSSEDGSSQTMAFTAMFESGSYVDSISFFGVHLTAVSESQI 250
           TEGHELGSGL+GKAQGFYVVSSEDG+SQTMAFT MFESG YVDS+SFFGVH TAVSES +
Sbjct: 226 TEGHELGSGLIGKAQGFYVVSSEDGNSQTMAFTTMFESGHYVDSLSFFGVHRTAVSESHL 285

Query: 249 GIMGGTGKYVNAKGFATVKTIPSTNQHDTDGVETLLEFTVYLA 121
            IMGGTGKYVNA+G+A VKT+P  NQH+TDGVETLL+FTVY++
Sbjct: 286 AIMGGTGKYVNARGYANVKTLPGINQHETDGVETLLQFTVYIS 328


>emb|CAN77499.1| hypothetical protein VITISV_002404 [Vitis vinifera]
          Length = 1393

 Score =  228 bits (582), Expect = 5e-58
 Identities = 119/161 (73%), Positives = 131/161 (81%), Gaps = 1/161 (0%)
 Frame = -2

Query: 603  LPFLTGLGGSTNTLVQXXXXXXXXXXXGLPSVNGAQLPGGTTVQKLMFGTMTVIDDELTE 424
            +PFLTGL G T T++            GLP  NG Q   G+++QKLMFGTMTVIDDELTE
Sbjct: 1231 IPFLTGLSGITPTVIPNNGNNLFNGGNGLPVGNGGQYLAGSSLQKLMFGTMTVIDDELTE 1290

Query: 423  GHELGSGLVGKAQGFYVVSSEDGSSQTMAFTAMFESGSYVDSISFFGVHLTAVSESQIGI 244
            GHELGSG VGKAQGFYV SSEDG+SQTMAFTAMF+SGSY DS+SFFGVH TAVSESQ+ I
Sbjct: 1291 GHELGSGSVGKAQGFYVASSEDGTSQTMAFTAMFQSGSYADSLSFFGVHRTAVSESQLAI 1350

Query: 243  MGGTGKYVNAKGFATVKTIPSTNQH-DTDGVETLLEFTVYL 124
            MGGTGKYVNAKGFATVKTIP T+Q   TDGVETLLEFTVY+
Sbjct: 1351 MGGTGKYVNAKGFATVKTIPPTHQQATTDGVETLLEFTVYV 1391


>ref|XP_003635227.1| PREDICTED: uncharacterized protein LOC100852526 [Vitis vinifera]
          Length = 358

 Score =  228 bits (580), Expect = 9e-58
 Identities = 118/161 (73%), Positives = 131/161 (81%), Gaps = 1/161 (0%)
 Frame = -2

Query: 603 LPFLTGLGGSTNTLVQXXXXXXXXXXXGLPSVNGAQLPGGTTVQKLMFGTMTVIDDELTE 424
           +PFLTGL G T T++            GLP  NG Q   G+++QKLMFGTMTVIDDE+TE
Sbjct: 196 IPFLTGLSGITPTVIPNNGNNLFNGGNGLPVGNGGQYLAGSSLQKLMFGTMTVIDDEITE 255

Query: 423 GHELGSGLVGKAQGFYVVSSEDGSSQTMAFTAMFESGSYVDSISFFGVHLTAVSESQIGI 244
           GHELGSG VGKAQGFYV SSEDG+SQTMAFTAMF+SGSY DS+SFFGVH TAVSESQ+ I
Sbjct: 256 GHELGSGSVGKAQGFYVASSEDGTSQTMAFTAMFQSGSYADSLSFFGVHRTAVSESQLAI 315

Query: 243 MGGTGKYVNAKGFATVKTIPSTNQH-DTDGVETLLEFTVYL 124
           MGGTGKYVNAKGFATVKTIP T+Q   TDGVETLLEFTVY+
Sbjct: 316 MGGTGKYVNAKGFATVKTIPPTHQQATTDGVETLLEFTVYV 356


>ref|XP_002315250.1| predicted protein [Populus trichocarpa] gi|222864290|gb|EEF01421.1|
           predicted protein [Populus trichocarpa]
          Length = 219

 Score =  223 bits (567), Expect = 3e-56
 Identities = 111/161 (68%), Positives = 127/161 (78%)
 Frame = -2

Query: 603 LPFLTGLGGSTNTLVQXXXXXXXXXXXGLPSVNGAQLPGGTTVQKLMFGTMTVIDDELTE 424
           LPFLTGLGG+T  ++Q            LP   G  LP G+  Q+LMFGT+TVIDDE+TE
Sbjct: 59  LPFLTGLGGTTQPVLQNNGNNFNNAFN-LPQSTGGNLPSGSAFQQLMFGTITVIDDEITE 117

Query: 423 GHELGSGLVGKAQGFYVVSSEDGSSQTMAFTAMFESGSYVDSISFFGVHLTAVSESQIGI 244
           GH+LGSG +GKAQGFYV SS DG+SQTMAFTAMF+SG Y DS+SFFGVH T VSESQ+ I
Sbjct: 118 GHDLGSGFIGKAQGFYVASSVDGTSQTMAFTAMFQSGLYADSLSFFGVHRTGVSESQLAI 177

Query: 243 MGGTGKYVNAKGFATVKTIPSTNQHDTDGVETLLEFTVYLA 121
           MGGTGKYVNA+GFA VKTIPS NQH TDGVETLLEF VY++
Sbjct: 178 MGGTGKYVNAQGFAIVKTIPSNNQHATDGVETLLEFAVYVS 218


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