BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027696
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300142.1| f-box family protein [Populus trichocarpa] g...    64   2e-08
emb|CAN83117.1| hypothetical protein VITISV_017709 [Vitis vinifera]    63   2e-08
ref|XP_002271158.2| PREDICTED: putative F-box/LRR-repeat protein...    63   3e-08
emb|CBI23317.3| unnamed protein product [Vitis vinifera]               63   3e-08

>ref|XP_002300142.1| f-box family protein [Populus trichocarpa]
           gi|222847400|gb|EEE84947.1| f-box family protein
           [Populus trichocarpa]
          Length = 481

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 47/156 (30%), Positives = 82/156 (52%), Gaps = 17/156 (10%)
 Frame = -3

Query: 485 LLESLHLLRCNGLRKLSIK-SPNLEYLLLFFS------VEGLRLDIQAPYLKVLECMGEI 327
           LLE L L +C G  +++   S +L+ L++  S           + I+ P L  L   G +
Sbjct: 224 LLEYLKLNQCCGFDQINTNFSSSLKDLVVDGSWGPEDKFGDFVITIKGPNLLSLTLAGYM 283

Query: 326 --ANYRLIDVSSLVYAIVRTHRITCN--------VSYQTIVTSFLTSVRRAECLAVCTRF 177
             ANY L+DVSSLV A +     +C+         ++++++   L  ++  E L + T  
Sbjct: 284 HRANYMLLDVSSLVEASIGYRMKSCSHGCRSNWYSAHRSVLHDLLEKLQHVEKLTIGTWC 343

Query: 176 LEMVSLLEIESLPTPSTDCNYLELKANLTKWELPGI 69
           L+++S+ E++ L +P++ C YL L   + KW+LPGI
Sbjct: 344 LQVLSISEVKGLSSPTSACKYLTLNKKINKWDLPGI 379


>emb|CAN83117.1| hypothetical protein VITISV_017709 [Vitis vinifera]
          Length = 526

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 51/152 (33%), Positives = 78/152 (51%), Gaps = 14/152 (9%)
 Frame = -3

Query: 482 LESLHLLRCNGLRKLSIKSPNLEYLLLFF-----SVEGLR-LDIQAPYLKVLECMGEIAN 321
           LE L   RC+G  +++I S +L+ L +         EG   L++ AP ++ LE  G    
Sbjct: 226 LECLEFHRCHGFARINICSESLKKLSILEPWAPNDAEGETVLEVSAPNIRSLELSGNWEK 285

Query: 320 Y-RLIDVSSLVYA---IVRTHRIT----CNVSYQTIVTSFLTSVRRAECLAVCTRFLEMV 165
             RL+D+SSLV A   I   H+       +  Y  ++   L  +   E L V T  LE++
Sbjct: 286 MCRLLDMSSLVNAKLDIQMMHQDRNFQYFSEDYSNMLREILKQLSHVENLTVGTWCLEVL 345

Query: 164 SLLEIESLPTPSTDCNYLELKANLTKWELPGI 69
           S+LE++S+P+P +   YL L     KW+LPGI
Sbjct: 346 SVLEMKSMPSPLSKHRYLILNTLPKKWDLPGI 377


>ref|XP_002271158.2| PREDICTED: putative F-box/LRR-repeat protein At3g18150-like [Vitis
           vinifera]
          Length = 665

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 51/152 (33%), Positives = 78/152 (51%), Gaps = 14/152 (9%)
 Frame = -3

Query: 482 LESLHLLRCNGLRKLSIKSPNLEYLLLFF-----SVEGLR-LDIQAPYLKVLECMGEIAN 321
           LE L   RC+G  +++I S +L+ L +         EG   L++ AP ++ LE  G    
Sbjct: 226 LECLEFHRCHGFARINICSESLKKLSILEPWAPNDAEGETVLEVSAPNIRSLELSGNWEK 285

Query: 320 Y-RLIDVSSLVYA---IVRTHRIT----CNVSYQTIVTSFLTSVRRAECLAVCTRFLEMV 165
             RL+D+SSLV A   I   H+       +  Y  ++   L  +   E L V T  LE++
Sbjct: 286 MCRLLDMSSLVNAKLDIQMMHQDRNFQYFSEDYSNMLREILKHLSHVENLTVGTWCLEVL 345

Query: 164 SLLEIESLPTPSTDCNYLELKANLTKWELPGI 69
           S+LE++S+P+P +   YL L     KW+LPGI
Sbjct: 346 SVLEMKSMPSPLSKHRYLILNTLPKKWDLPGI 377



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 52/149 (34%), Positives = 74/149 (49%), Gaps = 11/149 (7%)
 Frame = -3

Query: 482 LESLHL--LRCNGLRKLSIKSPNLEYLLLFFSVEGLR-LDIQAPYLKVLECMGEIANY-R 315
           LE LH+     N L+KLSI  P           EG   L++ AP ++ LE  G      R
Sbjct: 387 LEKLHIDVNPLNVLKKLSILEPWAPN-----DAEGETVLEVSAPNIRSLELSGNWEKMCR 441

Query: 314 LIDVSSLVYA---IVRTHRIT----CNVSYQTIVTSFLTSVRRAECLAVCTRFLEMVSLL 156
           L+D+SSLV A   I   H+       +  Y  ++   L  +   E L V T  LE++S+L
Sbjct: 442 LLDMSSLVNAKLDIQMMHQDRNFQYFSEDYSNMLREILKQLSHVENLTVGTWCLEVLSVL 501

Query: 155 EIESLPTPSTDCNYLELKANLTKWELPGI 69
           E++S+P+P +   YL L     KW+LPGI
Sbjct: 502 EMKSMPSPLSKHRYLILNTLPKKWDLPGI 530


>emb|CBI23317.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 51/152 (33%), Positives = 78/152 (51%), Gaps = 14/152 (9%)
 Frame = -3

Query: 482 LESLHLLRCNGLRKLSIKSPNLEYLLLFF-----SVEGLR-LDIQAPYLKVLECMGEIAN 321
           LE L   RC+G  +++I S +L+ L +         EG   L++ AP ++ LE  G    
Sbjct: 226 LECLEFHRCHGFARINICSESLKKLSILEPWAPNDAEGETVLEVSAPNIRSLELSGNWEK 285

Query: 320 Y-RLIDVSSLVYA---IVRTHRIT----CNVSYQTIVTSFLTSVRRAECLAVCTRFLEMV 165
             RL+D+SSLV A   I   H+       +  Y  ++   L  +   E L V T  LE++
Sbjct: 286 MCRLLDMSSLVNAKLDIQMMHQDRNFQYFSEDYSNMLREILKHLSHVENLTVGTWCLEVL 345

Query: 164 SLLEIESLPTPSTDCNYLELKANLTKWELPGI 69
           S+LE++S+P+P +   YL L     KW+LPGI
Sbjct: 346 SVLEMKSMPSPLSKHRYLILNTLPKKWDLPGI 377