BLASTX nr result

ID: Coptis24_contig00027689 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027689
         (651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE03644.2| OSJNBa0060N03.9 [Oryza sativa Japonica Group]         143   1e-39
gb|ABA94321.1| retrotransposon protein, putative, unclassified [...   141   5e-39
ref|XP_003520384.1| PREDICTED: uncharacterized protein LOC100795...   138   2e-38
emb|CAN74794.1| hypothetical protein VITISV_041689 [Vitis vinifera]   135   1e-37
emb|CAN71267.1| hypothetical protein VITISV_017889 [Vitis vinifera]   134   1e-37

>emb|CAE03644.2| OSJNBa0060N03.9 [Oryza sativa Japonica Group]
          Length = 1045

 Score =  143 bits (361), Expect(2) = 1e-39
 Identities = 71/183 (38%), Positives = 106/183 (57%)
 Frame = +1

Query: 1   KKIFGRGYERDGLYMFGEPPTALASITPVFSDPCQVPFCSKTLHLWHARLGHANFQHLCS 180
           ++  G G  RDGL+        L         P  V    K + L H +LGH +F+ L  
Sbjct: 376 RRRIGTGVRRDGLWYINHEELGL---------PALVGDVEKEISLLHCQLGHPSFEILSK 426

Query: 181 LLPVLRNSCQSNKFQCVVCELSKHTLVSYISHMHRSACLFYLIHTDVWGPSPVTSFDGYR 360
           L P L +    ++  C  CEL KHT  +Y+    R+   F LIH+DVWGP PVTS  G++
Sbjct: 427 LYPDLFSRVDKHRLVCDACELGKHTRSTYVGIGLRNCEPFILIHSDVWGPCPVTSVSGFK 486

Query: 361 YYITFIDDHSRFTWLYLLKSRSEVLPTFLNFMQMIQTQFGVTVRSVRSDNAKEYISDDFK 540
           +++TFID H+R TW+Y+LK +SEVL  F +F +++ TQF   V+ +R+DN  EYI+++F 
Sbjct: 487 WFVTFIDCHTRMTWIYMLKHKSEVLRCFQDFHKLVTTQFDAKVKIIRTDNGTEYINNEFV 546

Query: 541 QHL 549
            ++
Sbjct: 547 SYV 549



 Score = 45.8 bits (107), Expect(2) = 1e-39
 Identities = 20/31 (64%), Positives = 24/31 (77%)
 Frame = +3

Query: 558 KGVIQQLTCPYSP*QNGVAEPKNRHLMNVVR 650
           +G+I Q TCP +P QNGVAE KNRHL+ V R
Sbjct: 552 EGIIHQTTCPGTPPQNGVAERKNRHLLEVAR 582


>gb|ABA94321.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1133

 Score =  141 bits (355), Expect(2) = 5e-39
 Identities = 70/179 (39%), Positives = 105/179 (58%)
 Frame = +1

Query: 13  GRGYERDGLYMFGEPPTALASITPVFSDPCQVPFCSKTLHLWHARLGHANFQHLCSLLPV 192
           G G  RDGL+        LA++         V    K + L H +LGH +F+ L  L P 
Sbjct: 211 GTGVRRDGLWYINHEELGLAAV---------VGDVEKEISLLHCQLGHPSFEILSKLYPD 261

Query: 193 LRNSCQSNKFQCVVCELSKHTLVSYISHMHRSACLFYLIHTDVWGPSPVTSFDGYRYYIT 372
           L +    ++  C  CEL KHT  +Y+    R+   F LIH+DVW P PVTS  G+++++T
Sbjct: 262 LFSRVDKHRLVCDACELGKHTRSTYVGIGLRNCEPFILIHSDVWEPCPVTSVSGFKWFVT 321

Query: 373 FIDDHSRFTWLYLLKSRSEVLPTFLNFMQMIQTQFGVTVRSVRSDNAKEYISDDFKQHL 549
           FID H+R TW+Y+LK +SEVL  F +F +++ TQF   V+ +R+DN  EYI+++F  ++
Sbjct: 322 FIDCHTRMTWIYMLKHKSEVLRCFQDFHKLVTTQFDAKVKIIRTDNGTEYINNEFVSYV 380



 Score = 45.8 bits (107), Expect(2) = 5e-39
 Identities = 20/31 (64%), Positives = 24/31 (77%)
 Frame = +3

Query: 558 KGVIQQLTCPYSP*QNGVAEPKNRHLMNVVR 650
           +G+I Q TCP +P QNGVAE KNRHL+ V R
Sbjct: 383 EGIIHQTTCPGTPPQNGVAERKNRHLLEVAR 413


>ref|XP_003520384.1| PREDICTED: uncharacterized protein LOC100795634 [Glycine max]
          Length = 1815

 Score =  138 bits (347), Expect(2) = 2e-38
 Identities = 75/185 (40%), Positives = 100/185 (54%)
 Frame = +1

Query: 4    KIFGRGYERDGLYMFGEPPTALASITPVFSDPCQVPFCSKTLHLWHARLGHANFQHLCSL 183
            ++ G G+E  GLY     P                 F +    L H RLGH +   L  +
Sbjct: 558  RLIGEGHESRGLYYLESSPPGSC-------------FATSRPKLLHDRLGHPSLPKLKIM 604

Query: 184  LPVLRNSCQSNKFQCVVCELSKHTLVSYISHMHRSACLFYLIHTDVWGPSPVTSFDGYRY 363
            +P L+N        C  C+L KH   S+   + R    F  IH+D+WGPS VTSF G+RY
Sbjct: 605  VPSLKNL---RVLDCESCQLGKHVRSSFPQTVQRCDSAFSTIHSDIWGPSRVTSF-GFRY 660

Query: 364  YITFIDDHSRFTWLYLLKSRSEVLPTFLNFMQMIQTQFGVTVRSVRSDNAKEYISDDFKQ 543
            ++TFID+ SR TW+YL+K RSE+LP F++F   I+ QFG T++  RSDNAKEY S D   
Sbjct: 661  FVTFIDEFSRCTWVYLMKDRSELLPIFVSFYNEIENQFGKTIKIFRSDNAKEYFSHDLSS 720

Query: 544  HLLKK 558
             L  K
Sbjct: 721  FLSSK 725



 Score = 47.0 bits (110), Expect(2) = 2e-38
 Identities = 19/31 (61%), Positives = 24/31 (77%)
 Frame = +3

Query: 558 KGVIQQLTCPYSP*QNGVAEPKNRHLMNVVR 650
           KG+I Q TCP++P QNG+AE KNRHL+   R
Sbjct: 725 KGIIHQSTCPHTPQQNGIAERKNRHLLETAR 755


>emb|CAN74794.1| hypothetical protein VITISV_041689 [Vitis vinifera]
          Length = 845

 Score =  135 bits (339), Expect(2) = 1e-37
 Identities = 64/148 (43%), Positives = 93/148 (62%), Gaps = 6/148 (4%)
 Frame = +1

Query: 133 LWHARLGHANFQHLCSLLPVLRNSCQSNK------FQCVVCELSKHTLVSYISHMHRSAC 294
           +WH RLGH N Q L     VL +    NK       +C  C+L K   + +  H  R++ 
Sbjct: 471 VWHRRLGHPNTQILSH---VLNSDLPGNKDRYSLSLECDSCKLGKSKTLPFPLHASRASH 527

Query: 295 LFYLIHTDVWGPSPVTSFDGYRYYITFIDDHSRFTWLYLLKSRSEVLPTFLNFMQMIQTQ 474
            F LIH+DVWGPSPV+S + ++YY+TFIDDHSRFTW+Y L+S+SEV  TF  F+  +  Q
Sbjct: 528 CFDLIHSDVWGPSPVSSHEKFKYYVTFIDDHSRFTWVYFLRSKSEVFXTFTEFLAYVDNQ 587

Query: 475 FGVTVRSVRSDNAKEYISDDFKQHLLKK 558
           F  +++++R+D+  EY+S +F+  L  K
Sbjct: 588 FSTSIKTLRTDSGGEYLSTEFQAFLASK 615



 Score = 47.8 bits (112), Expect(2) = 1e-37
 Identities = 21/31 (67%), Positives = 26/31 (83%)
 Frame = +3

Query: 558 KGVIQQLTCPYSP*QNGVAEPKNRHLMNVVR 650
           KG+I Q +CP +P QNGVAE KNRHL++VVR
Sbjct: 615 KGIIHQRSCPSTPQQNGVAERKNRHLLDVVR 645


>emb|CAN71267.1| hypothetical protein VITISV_017889 [Vitis vinifera]
          Length = 1576

 Score =  134 bits (338), Expect(2) = 1e-37
 Identities = 64/148 (43%), Positives = 93/148 (62%), Gaps = 6/148 (4%)
 Frame = +1

Query: 133  LWHARLGHANFQHLCSLLPVLRNSCQSNK------FQCVVCELSKHTLVSYISHMHRSAC 294
            +WH RLGH N Q L     VL +    NK       +C  C+L K   + +  H  R++ 
Sbjct: 636  VWHRRLGHPNTQILSH---VLNSDLPGNKDRYSLSLECDSCKLGKSKTLPFPLHASRASH 692

Query: 295  LFYLIHTDVWGPSPVTSFDGYRYYITFIDDHSRFTWLYLLKSRSEVLPTFLNFMQMIQTQ 474
             F LIH+DVWGPSPV+S + ++YY+TFIDDHSRFTW+Y L+S+SEV  TF  F+  +  Q
Sbjct: 693  CFDLIHSDVWGPSPVSSHEKFKYYVTFIDDHSRFTWVYFLRSKSEVFRTFTEFLAYVDNQ 752

Query: 475  FGVTVRSVRSDNAKEYISDDFKQHLLKK 558
            F  +++++R+D+  EY+S +F+  L  K
Sbjct: 753  FSTSIKTLRTDSGGEYLSTEFQAFLASK 780



 Score = 47.8 bits (112), Expect(2) = 1e-37
 Identities = 21/31 (67%), Positives = 26/31 (83%)
 Frame = +3

Query: 558 KGVIQQLTCPYSP*QNGVAEPKNRHLMNVVR 650
           KG+I Q +CP +P QNGVAE KNRHL++VVR
Sbjct: 780 KGIIHQRSCPSTPQQNGVAERKNRHLLDVVR 810


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