BLASTX nr result
ID: Coptis24_contig00027689
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00027689
(651 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAE03644.2| OSJNBa0060N03.9 [Oryza sativa Japonica Group] 143 1e-39
gb|ABA94321.1| retrotransposon protein, putative, unclassified [... 141 5e-39
ref|XP_003520384.1| PREDICTED: uncharacterized protein LOC100795... 138 2e-38
emb|CAN74794.1| hypothetical protein VITISV_041689 [Vitis vinifera] 135 1e-37
emb|CAN71267.1| hypothetical protein VITISV_017889 [Vitis vinifera] 134 1e-37
>emb|CAE03644.2| OSJNBa0060N03.9 [Oryza sativa Japonica Group]
Length = 1045
Score = 143 bits (361), Expect(2) = 1e-39
Identities = 71/183 (38%), Positives = 106/183 (57%)
Frame = +1
Query: 1 KKIFGRGYERDGLYMFGEPPTALASITPVFSDPCQVPFCSKTLHLWHARLGHANFQHLCS 180
++ G G RDGL+ L P V K + L H +LGH +F+ L
Sbjct: 376 RRRIGTGVRRDGLWYINHEELGL---------PALVGDVEKEISLLHCQLGHPSFEILSK 426
Query: 181 LLPVLRNSCQSNKFQCVVCELSKHTLVSYISHMHRSACLFYLIHTDVWGPSPVTSFDGYR 360
L P L + ++ C CEL KHT +Y+ R+ F LIH+DVWGP PVTS G++
Sbjct: 427 LYPDLFSRVDKHRLVCDACELGKHTRSTYVGIGLRNCEPFILIHSDVWGPCPVTSVSGFK 486
Query: 361 YYITFIDDHSRFTWLYLLKSRSEVLPTFLNFMQMIQTQFGVTVRSVRSDNAKEYISDDFK 540
+++TFID H+R TW+Y+LK +SEVL F +F +++ TQF V+ +R+DN EYI+++F
Sbjct: 487 WFVTFIDCHTRMTWIYMLKHKSEVLRCFQDFHKLVTTQFDAKVKIIRTDNGTEYINNEFV 546
Query: 541 QHL 549
++
Sbjct: 547 SYV 549
Score = 45.8 bits (107), Expect(2) = 1e-39
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = +3
Query: 558 KGVIQQLTCPYSP*QNGVAEPKNRHLMNVVR 650
+G+I Q TCP +P QNGVAE KNRHL+ V R
Sbjct: 552 EGIIHQTTCPGTPPQNGVAERKNRHLLEVAR 582
>gb|ABA94321.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1133
Score = 141 bits (355), Expect(2) = 5e-39
Identities = 70/179 (39%), Positives = 105/179 (58%)
Frame = +1
Query: 13 GRGYERDGLYMFGEPPTALASITPVFSDPCQVPFCSKTLHLWHARLGHANFQHLCSLLPV 192
G G RDGL+ LA++ V K + L H +LGH +F+ L L P
Sbjct: 211 GTGVRRDGLWYINHEELGLAAV---------VGDVEKEISLLHCQLGHPSFEILSKLYPD 261
Query: 193 LRNSCQSNKFQCVVCELSKHTLVSYISHMHRSACLFYLIHTDVWGPSPVTSFDGYRYYIT 372
L + ++ C CEL KHT +Y+ R+ F LIH+DVW P PVTS G+++++T
Sbjct: 262 LFSRVDKHRLVCDACELGKHTRSTYVGIGLRNCEPFILIHSDVWEPCPVTSVSGFKWFVT 321
Query: 373 FIDDHSRFTWLYLLKSRSEVLPTFLNFMQMIQTQFGVTVRSVRSDNAKEYISDDFKQHL 549
FID H+R TW+Y+LK +SEVL F +F +++ TQF V+ +R+DN EYI+++F ++
Sbjct: 322 FIDCHTRMTWIYMLKHKSEVLRCFQDFHKLVTTQFDAKVKIIRTDNGTEYINNEFVSYV 380
Score = 45.8 bits (107), Expect(2) = 5e-39
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = +3
Query: 558 KGVIQQLTCPYSP*QNGVAEPKNRHLMNVVR 650
+G+I Q TCP +P QNGVAE KNRHL+ V R
Sbjct: 383 EGIIHQTTCPGTPPQNGVAERKNRHLLEVAR 413
>ref|XP_003520384.1| PREDICTED: uncharacterized protein LOC100795634 [Glycine max]
Length = 1815
Score = 138 bits (347), Expect(2) = 2e-38
Identities = 75/185 (40%), Positives = 100/185 (54%)
Frame = +1
Query: 4 KIFGRGYERDGLYMFGEPPTALASITPVFSDPCQVPFCSKTLHLWHARLGHANFQHLCSL 183
++ G G+E GLY P F + L H RLGH + L +
Sbjct: 558 RLIGEGHESRGLYYLESSPPGSC-------------FATSRPKLLHDRLGHPSLPKLKIM 604
Query: 184 LPVLRNSCQSNKFQCVVCELSKHTLVSYISHMHRSACLFYLIHTDVWGPSPVTSFDGYRY 363
+P L+N C C+L KH S+ + R F IH+D+WGPS VTSF G+RY
Sbjct: 605 VPSLKNL---RVLDCESCQLGKHVRSSFPQTVQRCDSAFSTIHSDIWGPSRVTSF-GFRY 660
Query: 364 YITFIDDHSRFTWLYLLKSRSEVLPTFLNFMQMIQTQFGVTVRSVRSDNAKEYISDDFKQ 543
++TFID+ SR TW+YL+K RSE+LP F++F I+ QFG T++ RSDNAKEY S D
Sbjct: 661 FVTFIDEFSRCTWVYLMKDRSELLPIFVSFYNEIENQFGKTIKIFRSDNAKEYFSHDLSS 720
Query: 544 HLLKK 558
L K
Sbjct: 721 FLSSK 725
Score = 47.0 bits (110), Expect(2) = 2e-38
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +3
Query: 558 KGVIQQLTCPYSP*QNGVAEPKNRHLMNVVR 650
KG+I Q TCP++P QNG+AE KNRHL+ R
Sbjct: 725 KGIIHQSTCPHTPQQNGIAERKNRHLLETAR 755
>emb|CAN74794.1| hypothetical protein VITISV_041689 [Vitis vinifera]
Length = 845
Score = 135 bits (339), Expect(2) = 1e-37
Identities = 64/148 (43%), Positives = 93/148 (62%), Gaps = 6/148 (4%)
Frame = +1
Query: 133 LWHARLGHANFQHLCSLLPVLRNSCQSNK------FQCVVCELSKHTLVSYISHMHRSAC 294
+WH RLGH N Q L VL + NK +C C+L K + + H R++
Sbjct: 471 VWHRRLGHPNTQILSH---VLNSDLPGNKDRYSLSLECDSCKLGKSKTLPFPLHASRASH 527
Query: 295 LFYLIHTDVWGPSPVTSFDGYRYYITFIDDHSRFTWLYLLKSRSEVLPTFLNFMQMIQTQ 474
F LIH+DVWGPSPV+S + ++YY+TFIDDHSRFTW+Y L+S+SEV TF F+ + Q
Sbjct: 528 CFDLIHSDVWGPSPVSSHEKFKYYVTFIDDHSRFTWVYFLRSKSEVFXTFTEFLAYVDNQ 587
Query: 475 FGVTVRSVRSDNAKEYISDDFKQHLLKK 558
F +++++R+D+ EY+S +F+ L K
Sbjct: 588 FSTSIKTLRTDSGGEYLSTEFQAFLASK 615
Score = 47.8 bits (112), Expect(2) = 1e-37
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = +3
Query: 558 KGVIQQLTCPYSP*QNGVAEPKNRHLMNVVR 650
KG+I Q +CP +P QNGVAE KNRHL++VVR
Sbjct: 615 KGIIHQRSCPSTPQQNGVAERKNRHLLDVVR 645
>emb|CAN71267.1| hypothetical protein VITISV_017889 [Vitis vinifera]
Length = 1576
Score = 134 bits (338), Expect(2) = 1e-37
Identities = 64/148 (43%), Positives = 93/148 (62%), Gaps = 6/148 (4%)
Frame = +1
Query: 133 LWHARLGHANFQHLCSLLPVLRNSCQSNK------FQCVVCELSKHTLVSYISHMHRSAC 294
+WH RLGH N Q L VL + NK +C C+L K + + H R++
Sbjct: 636 VWHRRLGHPNTQILSH---VLNSDLPGNKDRYSLSLECDSCKLGKSKTLPFPLHASRASH 692
Query: 295 LFYLIHTDVWGPSPVTSFDGYRYYITFIDDHSRFTWLYLLKSRSEVLPTFLNFMQMIQTQ 474
F LIH+DVWGPSPV+S + ++YY+TFIDDHSRFTW+Y L+S+SEV TF F+ + Q
Sbjct: 693 CFDLIHSDVWGPSPVSSHEKFKYYVTFIDDHSRFTWVYFLRSKSEVFRTFTEFLAYVDNQ 752
Query: 475 FGVTVRSVRSDNAKEYISDDFKQHLLKK 558
F +++++R+D+ EY+S +F+ L K
Sbjct: 753 FSTSIKTLRTDSGGEYLSTEFQAFLASK 780
Score = 47.8 bits (112), Expect(2) = 1e-37
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = +3
Query: 558 KGVIQQLTCPYSP*QNGVAEPKNRHLMNVVR 650
KG+I Q +CP +P QNGVAE KNRHL++VVR
Sbjct: 780 KGIIHQRSCPSTPQQNGVAERKNRHLLDVVR 810