BLASTX nr result

ID: Coptis24_contig00027673 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027673
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB03164.1| unnamed protein product [Arabidopsis thaliana]        130   7e-35
ref|NP_188633.1| uncharacterized protein [Arabidopsis thaliana] ...   130   7e-35
ref|XP_002883220.1| binding protein [Arabidopsis lyrata subsp. l...   130   7e-35
dbj|BAE99597.1| hypothetical protein [Arabidopsis thaliana]           130   1e-34
ref|XP_002310360.1| predicted protein [Populus trichocarpa] gi|2...   132   2e-33

>dbj|BAB03164.1| unnamed protein product [Arabidopsis thaliana]
          Length = 450

 Score =  130 bits (328), Expect(2) = 7e-35
 Identities = 57/67 (85%), Positives = 65/67 (97%)
 Frame = +1

Query: 205 ALVSVLRSVGAGECWHKHGSFLDHLVDIYRILKLWNSPDSVSLCGLFHSAYSNSYVNLAI 384
           +L++VL+SVGAGECWHKHGSFLDHL+DIY+ILKLW +P+SV LCGLFHSAYSNSYVNLAI
Sbjct: 59  SLIAVLKSVGAGECWHKHGSFLDHLIDIYKILKLWKAPESVCLCGLFHSAYSNSYVNLAI 118

Query: 385 FDPSTGR 405
           FDPSTGR
Sbjct: 119 FDPSTGR 125



 Score = 41.6 bits (96), Expect(2) = 7e-35
 Identities = 18/21 (85%), Positives = 20/21 (95%)
 Frame = +2

Query: 77  ILEAARPFLRGELETIDPKLP 139
           +LE+ARPFLRGELE IDPKLP
Sbjct: 38  VLESARPFLRGELEKIDPKLP 58


>ref|NP_188633.1| uncharacterized protein [Arabidopsis thaliana]
           gi|63003792|gb|AAY25425.1| At3g19990 [Arabidopsis
           thaliana] gi|111074436|gb|ABH04591.1| At3g19990
           [Arabidopsis thaliana] gi|332642795|gb|AEE76316.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 425

 Score =  130 bits (328), Expect(2) = 7e-35
 Identities = 57/67 (85%), Positives = 65/67 (97%)
 Frame = +1

Query: 205 ALVSVLRSVGAGECWHKHGSFLDHLVDIYRILKLWNSPDSVSLCGLFHSAYSNSYVNLAI 384
           +L++VL+SVGAGECWHKHGSFLDHL+DIY+ILKLW +P+SV LCGLFHSAYSNSYVNLAI
Sbjct: 34  SLIAVLKSVGAGECWHKHGSFLDHLIDIYKILKLWKAPESVCLCGLFHSAYSNSYVNLAI 93

Query: 385 FDPSTGR 405
           FDPSTGR
Sbjct: 94  FDPSTGR 100



 Score = 41.6 bits (96), Expect(2) = 7e-35
 Identities = 18/21 (85%), Positives = 20/21 (95%)
 Frame = +2

Query: 77  ILEAARPFLRGELETIDPKLP 139
           +LE+ARPFLRGELE IDPKLP
Sbjct: 13  VLESARPFLRGELEKIDPKLP 33


>ref|XP_002883220.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297329060|gb|EFH59479.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 425

 Score =  130 bits (328), Expect(2) = 7e-35
 Identities = 57/67 (85%), Positives = 65/67 (97%)
 Frame = +1

Query: 205 ALVSVLRSVGAGECWHKHGSFLDHLVDIYRILKLWNSPDSVSLCGLFHSAYSNSYVNLAI 384
           +L++VL+SVGAGECWHKHGSFLDHL+DIY+ILKLW +P+SV LCGLFHSAYSNSYVNLAI
Sbjct: 34  SLIAVLKSVGAGECWHKHGSFLDHLIDIYKILKLWKAPESVCLCGLFHSAYSNSYVNLAI 93

Query: 385 FDPSTGR 405
           FDPSTGR
Sbjct: 94  FDPSTGR 100



 Score = 41.6 bits (96), Expect(2) = 7e-35
 Identities = 18/21 (85%), Positives = 20/21 (95%)
 Frame = +2

Query: 77  ILEAARPFLRGELETIDPKLP 139
           +LE+ARPFLRGELE IDPKLP
Sbjct: 13  VLESARPFLRGELEKIDPKLP 33


>dbj|BAE99597.1| hypothetical protein [Arabidopsis thaliana]
          Length = 412

 Score =  130 bits (328), Expect(2) = 1e-34
 Identities = 57/67 (85%), Positives = 65/67 (97%)
 Frame = +1

Query: 205 ALVSVLRSVGAGECWHKHGSFLDHLVDIYRILKLWNSPDSVSLCGLFHSAYSNSYVNLAI 384
           +L++VL+SVGAGECWHKHGSFLDHL+DIY+ILKLW +P+SV LCGLFHSAYSNSYVNLAI
Sbjct: 21  SLIAVLKSVGAGECWHKHGSFLDHLIDIYKILKLWKAPESVCLCGLFHSAYSNSYVNLAI 80

Query: 385 FDPSTGR 405
           FDPSTGR
Sbjct: 81  FDPSTGR 87



 Score = 40.4 bits (93), Expect(2) = 1e-34
 Identities = 18/20 (90%), Positives = 19/20 (95%)
 Frame = +2

Query: 80  LEAARPFLRGELETIDPKLP 139
           LE+ARPFLRGELE IDPKLP
Sbjct: 1   LESARPFLRGELEKIDPKLP 20


>ref|XP_002310360.1| predicted protein [Populus trichocarpa] gi|222853263|gb|EEE90810.1|
           predicted protein [Populus trichocarpa]
          Length = 430

 Score =  132 bits (333), Expect(2) = 2e-33
 Identities = 59/67 (88%), Positives = 65/67 (97%)
 Frame = +1

Query: 205 ALVSVLRSVGAGECWHKHGSFLDHLVDIYRILKLWNSPDSVSLCGLFHSAYSNSYVNLAI 384
           +L+SVLRSVGAGECWHKHGSFLDHLV+IYRILK+W +PDSV LCGLFHSAYSNSYVNLAI
Sbjct: 43  SLISVLRSVGAGECWHKHGSFLDHLVEIYRILKIWKAPDSVCLCGLFHSAYSNSYVNLAI 102

Query: 385 FDPSTGR 405
           FDP+TGR
Sbjct: 103 FDPNTGR 109



 Score = 34.7 bits (78), Expect(2) = 2e-33
 Identities = 15/21 (71%), Positives = 18/21 (85%)
 Frame = +2

Query: 77  ILEAARPFLRGELETIDPKLP 139
           +L +ARPFLRGELE+ID  LP
Sbjct: 22  LLASARPFLRGELESIDKNLP 42


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