BLASTX nr result
ID: Coptis24_contig00027673
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00027673 (407 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAB03164.1| unnamed protein product [Arabidopsis thaliana] 130 7e-35 ref|NP_188633.1| uncharacterized protein [Arabidopsis thaliana] ... 130 7e-35 ref|XP_002883220.1| binding protein [Arabidopsis lyrata subsp. l... 130 7e-35 dbj|BAE99597.1| hypothetical protein [Arabidopsis thaliana] 130 1e-34 ref|XP_002310360.1| predicted protein [Populus trichocarpa] gi|2... 132 2e-33 >dbj|BAB03164.1| unnamed protein product [Arabidopsis thaliana] Length = 450 Score = 130 bits (328), Expect(2) = 7e-35 Identities = 57/67 (85%), Positives = 65/67 (97%) Frame = +1 Query: 205 ALVSVLRSVGAGECWHKHGSFLDHLVDIYRILKLWNSPDSVSLCGLFHSAYSNSYVNLAI 384 +L++VL+SVGAGECWHKHGSFLDHL+DIY+ILKLW +P+SV LCGLFHSAYSNSYVNLAI Sbjct: 59 SLIAVLKSVGAGECWHKHGSFLDHLIDIYKILKLWKAPESVCLCGLFHSAYSNSYVNLAI 118 Query: 385 FDPSTGR 405 FDPSTGR Sbjct: 119 FDPSTGR 125 Score = 41.6 bits (96), Expect(2) = 7e-35 Identities = 18/21 (85%), Positives = 20/21 (95%) Frame = +2 Query: 77 ILEAARPFLRGELETIDPKLP 139 +LE+ARPFLRGELE IDPKLP Sbjct: 38 VLESARPFLRGELEKIDPKLP 58 >ref|NP_188633.1| uncharacterized protein [Arabidopsis thaliana] gi|63003792|gb|AAY25425.1| At3g19990 [Arabidopsis thaliana] gi|111074436|gb|ABH04591.1| At3g19990 [Arabidopsis thaliana] gi|332642795|gb|AEE76316.1| uncharacterized protein [Arabidopsis thaliana] Length = 425 Score = 130 bits (328), Expect(2) = 7e-35 Identities = 57/67 (85%), Positives = 65/67 (97%) Frame = +1 Query: 205 ALVSVLRSVGAGECWHKHGSFLDHLVDIYRILKLWNSPDSVSLCGLFHSAYSNSYVNLAI 384 +L++VL+SVGAGECWHKHGSFLDHL+DIY+ILKLW +P+SV LCGLFHSAYSNSYVNLAI Sbjct: 34 SLIAVLKSVGAGECWHKHGSFLDHLIDIYKILKLWKAPESVCLCGLFHSAYSNSYVNLAI 93 Query: 385 FDPSTGR 405 FDPSTGR Sbjct: 94 FDPSTGR 100 Score = 41.6 bits (96), Expect(2) = 7e-35 Identities = 18/21 (85%), Positives = 20/21 (95%) Frame = +2 Query: 77 ILEAARPFLRGELETIDPKLP 139 +LE+ARPFLRGELE IDPKLP Sbjct: 13 VLESARPFLRGELEKIDPKLP 33 >ref|XP_002883220.1| binding protein [Arabidopsis lyrata subsp. lyrata] gi|297329060|gb|EFH59479.1| binding protein [Arabidopsis lyrata subsp. lyrata] Length = 425 Score = 130 bits (328), Expect(2) = 7e-35 Identities = 57/67 (85%), Positives = 65/67 (97%) Frame = +1 Query: 205 ALVSVLRSVGAGECWHKHGSFLDHLVDIYRILKLWNSPDSVSLCGLFHSAYSNSYVNLAI 384 +L++VL+SVGAGECWHKHGSFLDHL+DIY+ILKLW +P+SV LCGLFHSAYSNSYVNLAI Sbjct: 34 SLIAVLKSVGAGECWHKHGSFLDHLIDIYKILKLWKAPESVCLCGLFHSAYSNSYVNLAI 93 Query: 385 FDPSTGR 405 FDPSTGR Sbjct: 94 FDPSTGR 100 Score = 41.6 bits (96), Expect(2) = 7e-35 Identities = 18/21 (85%), Positives = 20/21 (95%) Frame = +2 Query: 77 ILEAARPFLRGELETIDPKLP 139 +LE+ARPFLRGELE IDPKLP Sbjct: 13 VLESARPFLRGELEKIDPKLP 33 >dbj|BAE99597.1| hypothetical protein [Arabidopsis thaliana] Length = 412 Score = 130 bits (328), Expect(2) = 1e-34 Identities = 57/67 (85%), Positives = 65/67 (97%) Frame = +1 Query: 205 ALVSVLRSVGAGECWHKHGSFLDHLVDIYRILKLWNSPDSVSLCGLFHSAYSNSYVNLAI 384 +L++VL+SVGAGECWHKHGSFLDHL+DIY+ILKLW +P+SV LCGLFHSAYSNSYVNLAI Sbjct: 21 SLIAVLKSVGAGECWHKHGSFLDHLIDIYKILKLWKAPESVCLCGLFHSAYSNSYVNLAI 80 Query: 385 FDPSTGR 405 FDPSTGR Sbjct: 81 FDPSTGR 87 Score = 40.4 bits (93), Expect(2) = 1e-34 Identities = 18/20 (90%), Positives = 19/20 (95%) Frame = +2 Query: 80 LEAARPFLRGELETIDPKLP 139 LE+ARPFLRGELE IDPKLP Sbjct: 1 LESARPFLRGELEKIDPKLP 20 >ref|XP_002310360.1| predicted protein [Populus trichocarpa] gi|222853263|gb|EEE90810.1| predicted protein [Populus trichocarpa] Length = 430 Score = 132 bits (333), Expect(2) = 2e-33 Identities = 59/67 (88%), Positives = 65/67 (97%) Frame = +1 Query: 205 ALVSVLRSVGAGECWHKHGSFLDHLVDIYRILKLWNSPDSVSLCGLFHSAYSNSYVNLAI 384 +L+SVLRSVGAGECWHKHGSFLDHLV+IYRILK+W +PDSV LCGLFHSAYSNSYVNLAI Sbjct: 43 SLISVLRSVGAGECWHKHGSFLDHLVEIYRILKIWKAPDSVCLCGLFHSAYSNSYVNLAI 102 Query: 385 FDPSTGR 405 FDP+TGR Sbjct: 103 FDPNTGR 109 Score = 34.7 bits (78), Expect(2) = 2e-33 Identities = 15/21 (71%), Positives = 18/21 (85%) Frame = +2 Query: 77 ILEAARPFLRGELETIDPKLP 139 +L +ARPFLRGELE+ID LP Sbjct: 22 LLASARPFLRGELESIDKNLP 42