BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027672
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328726.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitoc...    69   3e-10
emb|CBI18448.3| unnamed protein product [Vitis vinifera]               69   3e-10
ref|XP_002887761.1| hypothetical protein ARALYDRAFT_477057 [Arab...    69   4e-10
gb|AAC83020.1| Contains similarity to gi|1786244 hypothetical 24...    68   9e-10

>ref|XP_002328726.1| predicted protein [Populus trichocarpa] gi|222839024|gb|EEE77375.1|
           predicted protein [Populus trichocarpa]
          Length = 177

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/51 (72%), Positives = 43/51 (84%)
 Frame = -1

Query: 311 PNIAKFQEVLDGKRQLDKQSDLSSKPDLLRFVAPMPSHMKISWNLMSSYLV 159
           PNIAKF +VLDGK + +    LS++PDLLRFVA MPSHMKISWNLMSS+LV
Sbjct: 128 PNIAKFLDVLDGKSE-NVHPALSTRPDLLRFVASMPSHMKISWNLMSSFLV 177


>ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Vitis
           vinifera]
          Length = 479

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 36/52 (69%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
 Frame = -1

Query: 311 PNIAKFQEVLDGKRQLDKQ-SDLSSKPDLLRFVAPMPSHMKISWNLMSSYLV 159
           PNIAKF  +LD K +   Q   LS KPD+LRFVA MP+HMKISWNLMSSYLV
Sbjct: 428 PNIAKFLPILDPKPKNQNQYPKLSLKPDILRFVASMPNHMKISWNLMSSYLV 479


>emb|CBI18448.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 36/52 (69%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
 Frame = -1

Query: 311 PNIAKFQEVLDGKRQLDKQ-SDLSSKPDLLRFVAPMPSHMKISWNLMSSYLV 159
           PNIAKF  +LD K +   Q   LS KPD+LRFVA MP+HMKISWNLMSSYLV
Sbjct: 430 PNIAKFLPILDPKPKNQNQYPKLSLKPDILRFVASMPNHMKISWNLMSSYLV 481


>ref|XP_002887761.1| hypothetical protein ARALYDRAFT_477057 [Arabidopsis lyrata subsp.
           lyrata] gi|297333602|gb|EFH64020.1| hypothetical protein
           ARALYDRAFT_477057 [Arabidopsis lyrata subsp. lyrata]
          Length = 477

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/51 (66%), Positives = 39/51 (76%)
 Frame = -1

Query: 311 PNIAKFQEVLDGKRQLDKQSDLSSKPDLLRFVAPMPSHMKISWNLMSSYLV 159
           PNIAKF  VL+ +     ++ +  KPDLLRFVA MPSHMKISWNLMSSYLV
Sbjct: 427 PNIAKFLHVLNQQETEPLRTGIIDKPDLLRFVASMPSHMKISWNLMSSYLV 477


>gb|AAC83020.1| Contains similarity to gi|1786244 hypothetical 24.9 kD protein in
           surA-hepA intergenic region yab0 from Escherichia coli
           genome gb|AE000116, and to hypothetical YABO family
           PF|00849 [Arabidopsis thaliana]
          Length = 491

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/51 (64%), Positives = 38/51 (74%)
 Frame = -1

Query: 311 PNIAKFQEVLDGKRQLDKQSDLSSKPDLLRFVAPMPSHMKISWNLMSSYLV 159
           PNIAKF  V++ +      + +  KPDLLRFVA MPSHMKISWNLMSSYLV
Sbjct: 441 PNIAKFLHVMNQQETEPLHTGIIDKPDLLRFVASMPSHMKISWNLMSSYLV 491