BLASTX nr result

ID: Coptis24_contig00027645 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027645
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33851.3| unnamed protein product [Vitis vinifera]               67   1e-09
ref|XP_002279665.1| PREDICTED: pattern formation protein EMB30-l...    67   1e-09
emb|CAN61434.1| hypothetical protein VITISV_034390 [Vitis vinifera]    67   1e-09
ref|XP_004165691.1| PREDICTED: pattern formation protein EMB30-l...    62   4e-08
ref|XP_004147711.1| PREDICTED: pattern formation protein EMB30-l...    62   4e-08

>emb|CBI33851.3| unnamed protein product [Vitis vinifera]
          Length = 1264

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 34/51 (66%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
 Frame = +2

Query: 164 MGGLKLQSGMKAVKEEREHGYCTSS-RGALACTVNSEIGAVLSVMRRNVRW 313
           MG LKLQSG+K+++EE E    TSS + ALAC +NSE+GAVL+VMRRNVRW
Sbjct: 1   MGRLKLQSGIKSIEEEPEDCESTSSNKAALACMINSEVGAVLAVMRRNVRW 51


>ref|XP_002279665.1| PREDICTED: pattern formation protein EMB30-like [Vitis vinifera]
          Length = 1470

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 34/51 (66%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
 Frame = +2

Query: 164 MGGLKLQSGMKAVKEEREHGYCTSS-RGALACTVNSEIGAVLSVMRRNVRW 313
           MG LKLQSG+K+++EE E    TSS + ALAC +NSE+GAVL+VMRRNVRW
Sbjct: 1   MGRLKLQSGIKSIEEEPEDCESTSSNKAALACMINSEVGAVLAVMRRNVRW 51


>emb|CAN61434.1| hypothetical protein VITISV_034390 [Vitis vinifera]
          Length = 1433

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 34/51 (66%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
 Frame = +2

Query: 164 MGGLKLQSGMKAVKEEREHGYCTSS-RGALACTVNSEIGAVLSVMRRNVRW 313
           MG LKLQSG+K+++EE E    TSS + ALAC +NSE+GAVL+VMRRNVRW
Sbjct: 1   MGRLKLQSGIKSIEEEPEDCESTSSNKAALACMINSEVGAVLAVMRRNVRW 51


>ref|XP_004165691.1| PREDICTED: pattern formation protein EMB30-like [Cucumis sativus]
          Length = 1469

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/51 (62%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
 Frame = +2

Query: 164 MGGLKLQSGMKAVKEEREHGYCT-SSRGALACTVNSEIGAVLSVMRRNVRW 313
           MG LKLQ+G+ A++EE E    T +++ ALAC +NSEIGAVL+VMRRNVRW
Sbjct: 1   MGRLKLQTGINAIEEEPEECDVTYTNKTALACMINSEIGAVLAVMRRNVRW 51


>ref|XP_004147711.1| PREDICTED: pattern formation protein EMB30-like [Cucumis sativus]
          Length = 1122

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/51 (62%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
 Frame = +2

Query: 164 MGGLKLQSGMKAVKEEREHGYCT-SSRGALACTVNSEIGAVLSVMRRNVRW 313
           MG LKLQ+G+ A++EE E    T +++ ALAC +NSEIGAVL+VMRRNVRW
Sbjct: 1   MGRLKLQTGINAIEEEPEECDVTYTNKTALACMINSEIGAVLAVMRRNVRW 51


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