BLASTX nr result

ID: Coptis24_contig00027604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027604
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM08782.1|AC016780_12 Hypothetical protein with similarity t...    55   8e-12
gb|EEE50964.1| hypothetical protein OsJ_31531 [Oryza sativa Japo...    55   8e-12
emb|CCD74533.1| similar to hAT dimerisation domain-containing pr...    58   5e-11
gb|AFW69574.1| hypothetical protein ZEAMMB73_460673 [Zea mays]         55   8e-11
ref|XP_003551685.1| PREDICTED: LOW QUALITY PROTEIN: 52 kDa repre...    57   8e-11

>gb|AAM08782.1|AC016780_12 Hypothetical protein with similarity to putative Ac-like
           transposases [Oryza sativa] gi|31432092|gb|AAP53777.1|
           hAT family dimerisation domain containing protein [Oryza
           sativa Japonica Group]
          Length = 753

 Score = 55.1 bits (131), Expect(2) = 8e-12
 Identities = 22/41 (53%), Positives = 35/41 (85%)
 Frame = +3

Query: 123 QSAKELFRIRYFIYIVDQALSSLRSRFDEFQKFEGIFGFLY 245
           Q+A++ FRI YFI+++DQA+SSL  RF+++Q ++ IFGFL+
Sbjct: 460 QTAEDSFRINYFIHVIDQAISSLTRRFEQYQGYQKIFGFLF 500



 Score = 39.7 bits (91), Expect(2) = 8e-12
 Identities = 17/33 (51%), Positives = 25/33 (75%)
 Frame = +2

Query: 5   AKEIAADMQVESVFHEKRIIRRKRQFDDNVTEK 103
           +KEIA +M + + FH+KR I+RKR FD+N  E+
Sbjct: 423 SKEIALEMNIGTTFHKKREIKRKRHFDENRGEE 455


>gb|EEE50964.1| hypothetical protein OsJ_31531 [Oryza sativa Japonica Group]
          Length = 647

 Score = 55.1 bits (131), Expect(2) = 8e-12
 Identities = 22/41 (53%), Positives = 35/41 (85%)
 Frame = +3

Query: 123 QSAKELFRIRYFIYIVDQALSSLRSRFDEFQKFEGIFGFLY 245
           Q+A++ FRI YFI+++DQA+SSL  RF+++Q ++ IFGFL+
Sbjct: 354 QTAEDSFRINYFIHVIDQAISSLTRRFEQYQGYQKIFGFLF 394



 Score = 39.7 bits (91), Expect(2) = 8e-12
 Identities = 17/33 (51%), Positives = 25/33 (75%)
 Frame = +2

Query: 5   AKEIAADMQVESVFHEKRIIRRKRQFDDNVTEK 103
           +KEIA +M + + FH+KR I+RKR FD+N  E+
Sbjct: 317 SKEIALEMNIGTTFHKKREIKRKRHFDENRGEE 349


>emb|CCD74533.1| similar to hAT dimerisation domain-containing protein [Arabidopsis
           halleri subsp. halleri]
          Length = 420

 Score = 58.2 bits (139), Expect(2) = 5e-11
 Identities = 27/51 (52%), Positives = 37/51 (72%)
 Frame = +3

Query: 96  LKNCHEELPQSAKELFRIRYFIYIVDQALSSLRSRFDEFQKFEGIFGFLYD 248
           L+N    +  S +E FR+ YFI I+DQAL SL  RF++FQ++E IFGFL+D
Sbjct: 315 LENMEGSVTLSPEESFRVDYFIQIMDQALYSLEMRFEQFQRYEQIFGFLFD 365



 Score = 33.9 bits (76), Expect(2) = 5e-11
 Identities = 15/33 (45%), Positives = 25/33 (75%), Gaps = 2/33 (6%)
 Frame = +2

Query: 2   EAKEIAADMQVESVFHE--KRIIRRKRQFDDNV 94
           EAKEIA  ++++ VF +  KR+I+RKR +D+ +
Sbjct: 283 EAKEIAKSLEIDHVFPKKAKRVIKRKRHYDEEL 315


>gb|AFW69574.1| hypothetical protein ZEAMMB73_460673 [Zea mays]
          Length = 797

 Score = 55.1 bits (131), Expect(2) = 8e-11
 Identities = 25/42 (59%), Positives = 35/42 (83%)
 Frame = +3

Query: 123 QSAKELFRIRYFIYIVDQALSSLRSRFDEFQKFEGIFGFLYD 248
           QSA+E FRI YF+ IVDQA+SSL  RF+++Q ++ IFGFL++
Sbjct: 609 QSAEESFRITYFLPIVDQAVSSLTRRFEQYQGYQKIFGFLFN 650



 Score = 36.2 bits (82), Expect(2) = 8e-11
 Identities = 15/32 (46%), Positives = 24/32 (75%)
 Frame = +2

Query: 5   AKEIAADMQVESVFHEKRIIRRKRQFDDNVTE 100
           AK+IA +M +++ F ++R I+RKR FD+N  E
Sbjct: 572 AKDIAHEMDIDTSFRKRREIKRKRHFDENPDE 603


>ref|XP_003551685.1| PREDICTED: LOW QUALITY PROTEIN: 52 kDa repressor of the inhibitor
           of the protein kinase-like [Glycine max]
          Length = 779

 Score = 57.4 bits (137), Expect(2) = 8e-11
 Identities = 23/50 (46%), Positives = 38/50 (76%)
 Frame = +3

Query: 99  KNCHEELPQSAKELFRIRYFIYIVDQALSSLRSRFDEFQKFEGIFGFLYD 248
           +N   E+  S +E FRI YF+YI+DQ+++S+ + F++F ++E IFGFL+D
Sbjct: 586 ENVSNEITHSPEESFRIEYFLYILDQSINSIETXFEQFLQYETIFGFLFD 635



 Score = 33.9 bits (76), Expect(2) = 8e-11
 Identities = 14/33 (42%), Positives = 23/33 (69%)
 Frame = +2

Query: 8   KEIAADMQVESVFHEKRIIRRKRQFDDNVTEKL 106
           +++A +M +E  F EKR I RK  FD+NV+ ++
Sbjct: 560 EKMAIEMDIELKFREKRKIHRKSHFDENVSNEI 592