BLASTX nr result

ID: Coptis24_contig00027599 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027599
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23675.3| unnamed protein product [Vitis vinifera]              201   7e-50
ref|XP_002281751.1| PREDICTED: uncharacterized protein LOC100258...   201   7e-50
emb|CAN71290.1| hypothetical protein VITISV_019350 [Vitis vinifera]   201   7e-50
ref|XP_002311684.1| predicted protein [Populus trichocarpa] gi|2...   195   4e-48
ref|XP_002528824.1| conserved hypothetical protein [Ricinus comm...   187   6e-46

>emb|CBI23675.3| unnamed protein product [Vitis vinifera]
          Length = 910

 Score =  201 bits (510), Expect = 7e-50
 Identities = 91/129 (70%), Positives = 112/129 (86%)
 Frame = +2

Query: 2   RYVVAASSGSTLESGFCAWDFYTKDVRAFHVEDERLTSSVRTVLGPLPNTGVYKRSALST 181
           RYVVAAS+G+T++SGFC+WDFY+K VRAFH+E+   T   RTVLGPL N  VY+R+ALST
Sbjct: 551 RYVVAASAGNTMDSGFCSWDFYSKAVRAFHIEEGTTT---RTVLGPLSNNSVYRRNALST 607

Query: 182 NMSPENQQWWYKPCGHLLASISSSQRVVSVYDIRDGEQVLNWEIQRPVITMDHSSPLHWR 361
            ++PEN+QWWYKPCG LL S +SSQRVV VYDIRDGEQ++ WE+Q+PV+TMD+SSPL WR
Sbjct: 608 ILAPENRQWWYKPCGPLLVSTASSQRVVKVYDIRDGEQIMMWEVQKPVLTMDYSSPLQWR 667

Query: 362 NRGKVVIAE 388
           NRGKVV+AE
Sbjct: 668 NRGKVVVAE 676


>ref|XP_002281751.1| PREDICTED: uncharacterized protein LOC100258054 [Vitis vinifera]
          Length = 986

 Score =  201 bits (510), Expect = 7e-50
 Identities = 91/129 (70%), Positives = 112/129 (86%)
 Frame = +2

Query: 2    RYVVAASSGSTLESGFCAWDFYTKDVRAFHVEDERLTSSVRTVLGPLPNTGVYKRSALST 181
            RYVVAAS+G+T++SGFC+WDFY+K VRAFH+E+   T   RTVLGPL N  VY+R+ALST
Sbjct: 639  RYVVAASAGNTMDSGFCSWDFYSKAVRAFHIEEGTTT---RTVLGPLSNNSVYRRNALST 695

Query: 182  NMSPENQQWWYKPCGHLLASISSSQRVVSVYDIRDGEQVLNWEIQRPVITMDHSSPLHWR 361
             ++PEN+QWWYKPCG LL S +SSQRVV VYDIRDGEQ++ WE+Q+PV+TMD+SSPL WR
Sbjct: 696  ILAPENRQWWYKPCGPLLVSTASSQRVVKVYDIRDGEQIMMWEVQKPVLTMDYSSPLQWR 755

Query: 362  NRGKVVIAE 388
            NRGKVV+AE
Sbjct: 756  NRGKVVVAE 764


>emb|CAN71290.1| hypothetical protein VITISV_019350 [Vitis vinifera]
          Length = 937

 Score =  201 bits (510), Expect = 7e-50
 Identities = 91/129 (70%), Positives = 112/129 (86%)
 Frame = +2

Query: 2   RYVVAASSGSTLESGFCAWDFYTKDVRAFHVEDERLTSSVRTVLGPLPNTGVYKRSALST 181
           RYVVAAS+G+T++SGFC+WDFY+K VRAFH+E+   T   RTVLGPL N  VY+R+ALST
Sbjct: 620 RYVVAASAGNTMDSGFCSWDFYSKAVRAFHIEEGTTT---RTVLGPLSNNSVYRRNALST 676

Query: 182 NMSPENQQWWYKPCGHLLASISSSQRVVSVYDIRDGEQVLNWEIQRPVITMDHSSPLHWR 361
            ++PEN+QWWYKPCG LL S +SSQRVV VYDIRDGEQ++ WE+Q+PV+TMD+SSPL WR
Sbjct: 677 ILAPENRQWWYKPCGPLLVSTASSQRVVKVYDIRDGEQIMMWEVQKPVLTMDYSSPLQWR 736

Query: 362 NRGKVVIAE 388
           NRGKVV+AE
Sbjct: 737 NRGKVVVAE 745


>ref|XP_002311684.1| predicted protein [Populus trichocarpa] gi|222851504|gb|EEE89051.1|
           predicted protein [Populus trichocarpa]
          Length = 925

 Score =  195 bits (495), Expect = 4e-48
 Identities = 88/129 (68%), Positives = 110/129 (85%)
 Frame = +2

Query: 2   RYVVAASSGSTLESGFCAWDFYTKDVRAFHVEDERLTSSVRTVLGPLPNTGVYKRSALST 181
           RYVVAAS+G+TL+SGFC+WDFY KDVRAFH+ED   T+S RTVLGPLPN    +R+ALS+
Sbjct: 559 RYVVAASAGNTLDSGFCSWDFYAKDVRAFHIEDGGTTAS-RTVLGPLPNNTASRRNALSS 617

Query: 182 NMSPENQQWWYKPCGHLLASISSSQRVVSVYDIRDGEQVLNWEIQRPVITMDHSSPLHWR 361
            + PE +QWWYKPCG L+ S +SSQ+VV V+DIRDGEQ++ WE+Q+PV+ MD+SSPL WR
Sbjct: 618 ILLPETRQWWYKPCGPLMISAASSQKVVKVHDIRDGEQIMKWEVQKPVLAMDYSSPLQWR 677

Query: 362 NRGKVVIAE 388
           NRGKVV+AE
Sbjct: 678 NRGKVVVAE 686


>ref|XP_002528824.1| conserved hypothetical protein [Ricinus communis]
           gi|223531736|gb|EEF33558.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 919

 Score =  187 bits (476), Expect = 6e-46
 Identities = 82/129 (63%), Positives = 110/129 (85%)
 Frame = +2

Query: 2   RYVVAASSGSTLESGFCAWDFYTKDVRAFHVEDERLTSSVRTVLGPLPNTGVYKRSALST 181
           RYV+AAS+G TL+SGFC+WDFYTKDVRAFH+ED   T+S RTVLG LPN+   +R++LS+
Sbjct: 570 RYVLAASAGGTLDSGFCSWDFYTKDVRAFHMEDGETTTS-RTVLGTLPNSATSRRNSLSS 628

Query: 182 NMSPENQQWWYKPCGHLLASISSSQRVVSVYDIRDGEQVLNWEIQRPVITMDHSSPLHWR 361
           ++ PE +QWWY+PCG L+ S +++QR V ++D+RDGEQ++ WE+QRPV+ MD+SSP+ WR
Sbjct: 629 SLLPEARQWWYRPCGPLIISTATTQRGVKIFDVRDGEQIMKWEVQRPVLAMDNSSPVQWR 688

Query: 362 NRGKVVIAE 388
           NRGKVVIAE
Sbjct: 689 NRGKVVIAE 697


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