BLASTX nr result

ID: Coptis24_contig00027588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027588
         (704 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635079.1| PREDICTED: uncharacterized protein LOC100852...   100   3e-19
ref|XP_002524361.1| conserved hypothetical protein [Ricinus comm...    89   7e-16
ref|XP_003549950.1| PREDICTED: uncharacterized protein LOC100781...    82   1e-13

>ref|XP_003635079.1| PREDICTED: uncharacterized protein LOC100852443 [Vitis vinifera]
           gi|297745672|emb|CBI40926.3| unnamed protein product
           [Vitis vinifera]
          Length = 183

 Score =  100 bits (249), Expect = 3e-19
 Identities = 62/187 (33%), Positives = 99/187 (52%), Gaps = 9/187 (4%)
 Frame = +3

Query: 108 IMRRGACCGEKAVLVTVFVERPTRRRVSSNHHPNKIHHPITQAVIRNRG-------GGRG 266
           + ++   C +KAVLVT++VE+P +R    NHH +  HH +    I+  G        GRG
Sbjct: 2   VTKKATSCKDKAVLVTLYVEKPRKR---INHHHHHHHHHLLYHTIKGEGFQQNYGADGRG 58

Query: 267 YDRKAELLRYSHCLRESARSTSTTPLHRPAAVASSQVHNQRPTTKIIIVQSKQRESRAPT 446
           Y R+A LL YS  LRESA+S ++  L+ P A++S    +Q+P  KI   QSK +  + P 
Sbjct: 59  YSRRALLLHYSQSLRESAQSAASASLN-PKAISSK---DQQPINKIAAGQSKPKHEKVPA 114

Query: 447 CMGSLKNFIPNFIKSLAG--SYRNEXXXXXXXXXTRSTSSSINTIVKSFQAQKKSGFFLK 620
           C+G  K  I + ++S     + +             S+ ++I  ++K+ + QKK GF  K
Sbjct: 115 CLGDWKLSIASLVRSFTSVQAKKTSNKKKKKKKDNGSSRANIAAVMKNLKVQKKLGFISK 174

Query: 621 LVTSFKK 641
           L+   +K
Sbjct: 175 LLKPSQK 181


>ref|XP_002524361.1| conserved hypothetical protein [Ricinus communis]
           gi|223536322|gb|EEF37972.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 192

 Score = 89.4 bits (220), Expect = 7e-16
 Identities = 63/193 (32%), Positives = 98/193 (50%), Gaps = 20/193 (10%)
 Frame = +3

Query: 129 CGEKAVLVTVFVERPTRRRVSSNHHPNKIHH---------PITQAVIRNRGG-----GRG 266
           C +K V+++V+VE+PT+R+V+S  H +  HH          I Q V  N+ G     G+G
Sbjct: 12  CKKKVVVISVYVEKPTKRKVTSKSHRHHHHHHHCHYYNHQNIKQEVTANKYGDSINAGKG 71

Query: 267 YDRKAELLRYSHCLRESA-----RSTSTTPLHRPAAVASSQVHNQRPTTKIIIVQSKQRE 431
           + R+A+LL YS  LRESA      S+   P+ +P    SS V   +PT  I +VQ K + 
Sbjct: 72  FSRRAQLLLYSQRLRESADHRPVESSHLDPIPKP---ISSNV--MQPTENIAVVQRKPKY 126

Query: 432 SRAPTCMGSLKNFIPNFIKSLAG-SYRNEXXXXXXXXXTRSTSSSINTIVKSFQAQKKSG 608
              P C+G  K     F +SL     +N+         T+ + S+ N ++ + + QKK G
Sbjct: 127 DNTPACLGKWKISKFKFCRSLTRVQIKND-------KKTKHSGSTSNAVMNNLKVQKKRG 179

Query: 609 FFLKLVTSFKKRK 647
           F  K +   +KR+
Sbjct: 180 FISKFLAVLQKRR 192


>ref|XP_003549950.1| PREDICTED: uncharacterized protein LOC100781097 [Glycine max]
          Length = 173

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 52/133 (39%), Positives = 70/133 (52%), Gaps = 4/133 (3%)
 Frame = +3

Query: 129 CGEKAVLVTVFVERPTRRRVSSNHHPN---KIHHPITQAVIRNRGGGRGYDRKAELLRYS 299
           C +KAVLV V+VE+P ++  SS  H +    I H I Q V+   G    Y R+A LL YS
Sbjct: 9   CNDKAVLVKVYVEKPRKKSSSSIQHQHLHYHIRHTIRQEVVLGSGSKGSYARRAGLLMYS 68

Query: 300 HCLRESARSTSTTPLHRPAAVASSQVHNQRPTTKIIIVQSKQRESR-APTCMGSLKNFIP 476
           H LRESA+   +TP            +N +P T+I     K+   R  PTC GSLK  IP
Sbjct: 69  HLLRESAKGALSTPSFSKLVAN----NNLQPPTQITPSNKKKPVYREKPTCFGSLKLLIP 124

Query: 477 NFIKSLAGSYRNE 515
            F++S + +   E
Sbjct: 125 RFLRSWSKAKNKE 137


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