BLASTX nr result
ID: Coptis24_contig00027579
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00027579 (954 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002283664.2| PREDICTED: ribosomal RNA small subunit methy... 366 4e-99 ref|XP_002318633.1| predicted protein [Populus trichocarpa] gi|2... 357 2e-96 ref|XP_002511459.1| Methyltransferase gidB, putative [Ricinus co... 347 2e-93 ref|XP_004152459.1| PREDICTED: ribosomal RNA small subunit methy... 342 6e-92 ref|XP_003608919.1| Ribosomal RNA small subunit methyltransferas... 325 1e-86 >ref|XP_002283664.2| PREDICTED: ribosomal RNA small subunit methyltransferase G-like [Vitis vinifera] gi|297733841|emb|CBI15088.3| unnamed protein product [Vitis vinifera] Length = 285 Score = 366 bits (940), Expect = 4e-99 Identities = 186/273 (68%), Positives = 216/273 (79%), Gaps = 6/273 (2%) Frame = -3 Query: 937 LSLPTFIKHLTPA------PHFSTSRPNLTTSCSNQVSPLLQTLNSRQKEQISLYINVLQ 776 LS+ TF+K +T + PH ++ TT N S +TLN QK+QISLY++ L Sbjct: 15 LSVGTFVKQVTTSISTRFRPHRIATKTLTTTKVLN--SSYFETLNPLQKQQISLYVDALL 72 Query: 775 EWNKKMNLTAVTETNEVMKRHVEDSLAIIPPIQNSYTSHCQSSYENINLVDVGSGAGLPG 596 +WN+KMNLTAVT+ +EVM+RHV DSLA+IPPIQ+SY +HC SS NI+LVDVGSG GLPG Sbjct: 73 QWNQKMNLTAVTKADEVMERHVGDSLAMIPPIQSSYIAHCDSSCNNISLVDVGSGPGLPG 132 Query: 595 LIFAIACPGWKVTLLESMNKRCLFLEHAVSVTGLSNVEVLRGRAENVGQNLDFREVFDXX 416 LI AIACP WK+TLLESMNKRC+FLEHAVS+TGLSNV+V+RGRAEN+GQN+ FREVFD Sbjct: 133 LILAIACPSWKITLLESMNKRCIFLEHAVSLTGLSNVQVVRGRAENLGQNIGFREVFDVA 192 Query: 415 XXXXXXXXXXXXEYCLPLVRVGGLFIAAKGHDPQEEVRNAGRAITLLGASVLQLSSVESH 236 EYCLPLVRVGGLF+AAKGHDPQEEVRNA RAI L+GASVLQL SVESH Sbjct: 193 VARAVAEMRILAEYCLPLVRVGGLFLAAKGHDPQEEVRNAERAIQLMGASVLQLCSVESH 252 Query: 235 SPYGQRTAVVCLKDRPTPRKYPRDPGTPAKVPL 137 SP+GQRTA+VCLKD PTPRKYPRDPGTP K PL Sbjct: 253 SPFGQRTAIVCLKDCPTPRKYPRDPGTPVKSPL 285 >ref|XP_002318633.1| predicted protein [Populus trichocarpa] gi|222859306|gb|EEE96853.1| predicted protein [Populus trichocarpa] Length = 288 Score = 357 bits (917), Expect = 2e-96 Identities = 177/274 (64%), Positives = 208/274 (75%), Gaps = 7/274 (2%) Frame = -3 Query: 937 LSLPTFIKHLT-------PAPHFSTSRPNLTTSCSNQVSPLLQTLNSRQKEQISLYINVL 779 LSL TF+KH + P S S + + RQK+QI LY++ L Sbjct: 15 LSLGTFVKHFSVIEPKAFPLHRIKAKSLTAAASIGTHNSSCFDSFSCRQKKQIRLYVDTL 74 Query: 778 QEWNKKMNLTAVTETNEVMKRHVEDSLAIIPPIQNSYTSHCQSSYENINLVDVGSGAGLP 599 +WN+KMNLTAVT+ +EVM+RH+EDSLAI+PPIQ+SY SHC +S ++I LVDVG+GAGLP Sbjct: 75 LQWNQKMNLTAVTDVDEVMERHIEDSLAILPPIQDSYVSHCNASIDSIKLVDVGTGAGLP 134 Query: 598 GLIFAIACPGWKVTLLESMNKRCLFLEHAVSVTGLSNVEVLRGRAENVGQNLDFREVFDX 419 GL+ AIACP WKVTLLESMNKRC FLEHA+SVTGLSNVEV+RGRAEN+GQN+ FRE FD Sbjct: 135 GLVLAIACPAWKVTLLESMNKRCDFLEHAISVTGLSNVEVVRGRAENLGQNVSFREKFDV 194 Query: 418 XXXXXXXXXXXXXEYCLPLVRVGGLFIAAKGHDPQEEVRNAGRAITLLGASVLQLSSVES 239 EYCLPLVRVGGLFIAAKGHDPQEEVRNA R++ L+G+S LQL SVES Sbjct: 195 AVARAVAEMRILAEYCLPLVRVGGLFIAAKGHDPQEEVRNAERSLKLMGSSTLQLCSVES 254 Query: 238 HSPYGQRTAVVCLKDRPTPRKYPRDPGTPAKVPL 137 SPYGQRTA++C KDRPTPRKYPRDPGTPAK+PL Sbjct: 255 RSPYGQRTAIICSKDRPTPRKYPRDPGTPAKLPL 288 >ref|XP_002511459.1| Methyltransferase gidB, putative [Ricinus communis] gi|223550574|gb|EEF52061.1| Methyltransferase gidB, putative [Ricinus communis] Length = 282 Score = 347 bits (890), Expect = 2e-93 Identities = 173/237 (72%), Positives = 195/237 (82%) Frame = -3 Query: 868 TTSCSNQVSPLLQTLNSRQKEQISLYINVLQEWNKKMNLTAVTETNEVMKRHVEDSLAII 689 TTSC ++LNSRQKEQI Y++ L EWN+KMNLTAVTE NEVM+RH+EDSLA++ Sbjct: 48 TTSC-------FESLNSRQKEQIRHYVDALLEWNQKMNLTAVTEANEVMRRHIEDSLAML 100 Query: 688 PPIQNSYTSHCQSSYENINLVDVGSGAGLPGLIFAIACPGWKVTLLESMNKRCLFLEHAV 509 PI+ SY SHC SS +N+ LVDVG+G GLPGLI AIACPGWKVTLLESMNKRC+FLEHAV Sbjct: 101 TPIRKSYISHCSSSIDNLKLVDVGTGPGLPGLILAIACPGWKVTLLESMNKRCVFLEHAV 160 Query: 508 SVTGLSNVEVLRGRAENVGQNLDFREVFDXXXXXXXXXXXXXXEYCLPLVRVGGLFIAAK 329 +VTGLSNVEVLRGRAE++GQN FRE FD EYCLPLVRVGGLFIAAK Sbjct: 161 NVTGLSNVEVLRGRAESLGQNDSFREQFDVAVARAVAEMRVLAEYCLPLVRVGGLFIAAK 220 Query: 328 GHDPQEEVRNAGRAITLLGASVLQLSSVESHSPYGQRTAVVCLKDRPTPRKYPRDPG 158 GHDPQEEVRNA R+I L+GASVLQL SVESHSPYGQRTA++ +KDRPTPRKYPRDPG Sbjct: 221 GHDPQEEVRNAERSIQLMGASVLQLCSVESHSPYGQRTAIISVKDRPTPRKYPRDPG 277 >ref|XP_004152459.1| PREDICTED: ribosomal RNA small subunit methyltransferase G-like [Cucumis sativus] gi|449527787|ref|XP_004170891.1| PREDICTED: ribosomal RNA small subunit methyltransferase G-like [Cucumis sativus] Length = 281 Score = 342 bits (878), Expect = 6e-92 Identities = 174/276 (63%), Positives = 208/276 (75%), Gaps = 8/276 (2%) Frame = -3 Query: 940 SLSLPTFIKHLTPAPH-------FSTSRPNLTTSCSNQVSPLLQTLNSRQKEQISLYINV 782 S SL TFIK +P P TS LT +C++ +TL SRQK+Q+ L+++ Sbjct: 6 SFSLRTFIKQFSPLPKRTPFSFPIRTSFKRLTVTCNSSRFLHFETLTSRQKDQVHLFVDA 65 Query: 781 LQEWNKKMNLTAVTETNEVMKRHVEDSLAIIPPIQNSYTSHCQSS-YENINLVDVGSGAG 605 L +WN+KMNLTA+TE NEVM+RHVEDSLAIIPPI+N Y SHC +S ++I LVDVG+GAG Sbjct: 66 LLQWNQKMNLTAITEVNEVMERHVEDSLAIIPPIRNLYMSHCSTSPCDDIKLVDVGTGAG 125 Query: 604 LPGLIFAIACPGWKVTLLESMNKRCLFLEHAVSVTGLSNVEVLRGRAENVGQNLDFREVF 425 LPGLI AIACP W+VTL+ESMNKRCLFLEHAV TGL+NV+V+RGRAEN+G +L RE F Sbjct: 126 LPGLIIAIACPEWQVTLMESMNKRCLFLEHAVGHTGLTNVQVVRGRAENLGHDLSLREKF 185 Query: 424 DXXXXXXXXXXXXXXEYCLPLVRVGGLFIAAKGHDPQEEVRNAGRAITLLGASVLQLSSV 245 D EYCLP+VRVGGLF+AAKGHDP EV NA +AI ++GAS+LQ+ V Sbjct: 186 DVVVARAVAEMRILAEYCLPMVRVGGLFLAAKGHDPLAEVTNAEKAIEMMGASLLQICPV 245 Query: 244 ESHSPYGQRTAVVCLKDRPTPRKYPRDPGTPAKVPL 137 ESHSPYGQRTAVVC K+R TPRKYPRDPGTPAK PL Sbjct: 246 ESHSPYGQRTAVVCFKERHTPRKYPRDPGTPAKSPL 281 >ref|XP_003608919.1| Ribosomal RNA small subunit methyltransferase G [Medicago truncatula] gi|355509974|gb|AES91116.1| Ribosomal RNA small subunit methyltransferase G [Medicago truncatula] Length = 518 Score = 325 bits (833), Expect = 1e-86 Identities = 160/265 (60%), Positives = 201/265 (75%) Frame = -3 Query: 925 TFIKHLTPAPHFSTSRPNLTTSCSNQVSPLLQTLNSRQKEQISLYINVLQEWNKKMNLTA 746 TF KHLTP + + + N T++ S+ + TL SRQK+QI LY++ L +WNK+MNLTA Sbjct: 248 TFFKHLTPRKYTTLCQNNSTSNLSHFL-----TLTSRQKDQIHLYVDTLLQWNKRMNLTA 302 Query: 745 VTETNEVMKRHVEDSLAIIPPIQNSYTSHCQSSYENINLVDVGSGAGLPGLIFAIACPGW 566 V E NEVM+RH+EDSLAI+PP+ ++Y SH S + + LVDVG+GAGLPG++ AIA P W Sbjct: 303 VKEVNEVMERHIEDSLAILPPLSDNYMSHSSKSIDKVKLVDVGTGAGLPGVVLAIARPDW 362 Query: 565 KVTLLESMNKRCLFLEHAVSVTGLSNVEVLRGRAENVGQNLDFREVFDXXXXXXXXXXXX 386 VTL+ESMNKRC+FLEH V V G SN++++RGRAE++GQNL +RE FD Sbjct: 363 DVTLMESMNKRCVFLEHVVGVIGSSNLQIVRGRAESLGQNLCYREKFDIAVARAVAETRV 422 Query: 385 XXEYCLPLVRVGGLFIAAKGHDPQEEVRNAGRAITLLGASVLQLSSVESHSPYGQRTAVV 206 EYCLPLVRVGG+FIAAKGHDP++EV+ A AI +GAS+LQ+ SVES SPYGQRTAV+ Sbjct: 423 LAEYCLPLVRVGGMFIAAKGHDPEDEVKKAENAIKKMGASLLQVCSVESQSPYGQRTAVI 482 Query: 205 CLKDRPTPRKYPRDPGTPAKVPL*K 131 CLKDRPTP KYPR PGTP+K PL K Sbjct: 483 CLKDRPTPMKYPRFPGTPSKEPLTK 507