BLASTX nr result
ID: Coptis24_contig00027573
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00027573 (747 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI17926.3| unnamed protein product [Vitis vinifera] 89 5e-39 emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera] 89 6e-39 ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containi... 58 3e-17 tpg|DAA51987.1| TPA: hypothetical protein ZEAMMB73_709752 [Zea m... 74 2e-16 ref|NP_001170755.1| uncharacterized protein LOC100384848 [Zea ma... 74 2e-16 >emb|CBI17926.3| unnamed protein product [Vitis vinifera] Length = 602 Score = 88.6 bits (218), Expect(3) = 5e-39 Identities = 39/73 (53%), Positives = 53/73 (72%) Frame = -2 Query: 305 DSGSFDCARRLFYEVSPRNVVVWNTMIHQCVKHENLGEAQNLFKTMPDKDVVSWNMMIGG 126 + GS D A R F E +N+VVWNTMIHQ V+H NL + LF++MPD+DVVSWN MIGG Sbjct: 239 ECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGG 298 Query: 125 LSQMGQSKEVIVF 87 +++GQ +E + + Sbjct: 299 FARIGQYQEALTW 311 Score = 79.7 bits (195), Expect(3) = 5e-39 Identities = 36/67 (53%), Positives = 47/67 (70%) Frame = -3 Query: 526 LILWTSMIRAYVCANCPREGLGVFRKTREAGIMPDSVALATIASACAQLGNLDIAKTMHG 347 L+LWT +IRAYVC P + L +FR RE G+ PD VA++T+ SAC LG+L +AK MH Sbjct: 157 LVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAISTVVSACGLLGDLGVAKAMHC 216 Query: 346 FISKADI 326 FI K+ I Sbjct: 217 FIEKSGI 223 Score = 40.0 bits (92), Expect(3) = 5e-39 Identities = 20/37 (54%), Positives = 22/37 (59%) Frame = -1 Query: 639 EVDSGGETVAHVVKFGNECSQFVCSVLLGFYVGCRCV 529 EV G E A VV+ G CS+FV LLGFYV C V Sbjct: 106 EVKEGEEVHASVVRTGFACSEFVSGALLGFYVACGLV 142 >emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera] Length = 602 Score = 88.6 bits (218), Expect(3) = 6e-39 Identities = 39/73 (53%), Positives = 53/73 (72%) Frame = -2 Query: 305 DSGSFDCARRLFYEVSPRNVVVWNTMIHQCVKHENLGEAQNLFKTMPDKDVVSWNMMIGG 126 + GS D A R F E +N+VVWNTMIHQ V+H NL + LF++MPD+DVVSWN MIGG Sbjct: 239 ECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGG 298 Query: 125 LSQMGQSKEVIVF 87 +++GQ +E + + Sbjct: 299 FARIGQYQEALTW 311 Score = 79.3 bits (194), Expect(3) = 6e-39 Identities = 36/67 (53%), Positives = 47/67 (70%) Frame = -3 Query: 526 LILWTSMIRAYVCANCPREGLGVFRKTREAGIMPDSVALATIASACAQLGNLDIAKTMHG 347 L+LWT +IRAYVC P + L +FR RE G+ PD VA++T+ SAC LG+L +AK MH Sbjct: 157 LVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAVSTVVSACGLLGDLGVAKAMHC 216 Query: 346 FISKADI 326 FI K+ I Sbjct: 217 FIEKSGI 223 Score = 40.0 bits (92), Expect(3) = 6e-39 Identities = 20/37 (54%), Positives = 22/37 (59%) Frame = -1 Query: 639 EVDSGGETVAHVVKFGNECSQFVCSVLLGFYVGCRCV 529 EV G E A VV+ G CS+FV LLGFYV C V Sbjct: 106 EVKEGEEVHASVVRTGFACSEFVSGALLGFYVACGLV 142 >ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Vitis vinifera] Length = 642 Score = 57.8 bits (138), Expect(3) = 3e-17 Identities = 28/73 (38%), Positives = 41/73 (56%) Frame = -2 Query: 311 FVDSGSFDCARRLFYEVSPRNVVVWNTMIHQCVKHENLGEAQNLFKTMPDKDVVSWNMMI 132 ++ G+ + AR+LF ++ + +V W TM+ + L A LF MPDKDVV WN MI Sbjct: 253 YMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMI 312 Query: 131 GGLSQMGQSKEVI 93 GG + KE + Sbjct: 313 GGYVHANRGKEAL 325 Score = 53.5 bits (127), Expect(3) = 3e-17 Identities = 24/65 (36%), Positives = 37/65 (56%) Frame = -3 Query: 529 ELILWTSMIRAYVCANCPREGLGVFRKTREAGIMPDSVALATIASACAQLGNLDIAKTMH 350 +L+ W SMI YV E L +R+ + GI PD V + + S+CAQL +LD+ + H Sbjct: 172 DLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESH 231 Query: 349 GFISK 335 +I + Sbjct: 232 CYIEE 236 Score = 23.1 bits (48), Expect(3) = 3e-17 Identities = 13/55 (23%), Positives = 22/55 (40%) Frame = -1 Query: 702 DSARPEQQKVEDKGKGKKILVEVDSGGETVAHVVKFGNECSQFVCSVLLGFYVGC 538 D +P+ K L + G E + HV+ G + FV + ++ V C Sbjct: 101 DGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSC 155 Score = 57.8 bits (138), Expect(2) = 2e-08 Identities = 28/79 (35%), Positives = 46/79 (58%) Frame = -3 Query: 529 ELILWTSMIRAYVCANCPREGLGVFRKTREAGIMPDSVALATIASACAQLGNLDIAKTMH 350 +++ W +MI YV AN +E L +F + + I PD V + + SAC+QLG LD+ +H Sbjct: 304 DVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIH 363 Query: 349 GFISKADISKAGILWTLVV 293 +I K ++S L T ++ Sbjct: 364 HYIEKHELSLNVALGTALI 382 Score = 26.9 bits (58), Expect(2) = 2e-08 Identities = 17/63 (26%), Positives = 25/63 (39%) Frame = -2 Query: 311 FVDSGSFDCARRLFYEVSPRNVVVWNTMIHQCVKHENLGEAQNLFKTMPDKDVVSWNMMI 132 + G A ++F E+ RN + W +I H N A F M D V+ + Sbjct: 385 YAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTF 444 Query: 131 GGL 123 GL Sbjct: 445 LGL 447 >tpg|DAA51987.1| TPA: hypothetical protein ZEAMMB73_709752 [Zea mays] Length = 536 Score = 73.6 bits (179), Expect(2) = 2e-16 Identities = 33/75 (44%), Positives = 47/75 (62%) Frame = -2 Query: 317 RYFVDSGSFDCARRLFYEVSPRNVVVWNTMIHQCVKHENLGEAQNLFKTMPDKDVVSWNM 138 R + + G +RRLF + R+ V WN M+HQ ++H N+G+A LF MP +DVVSWN Sbjct: 165 RVYGEYGELALSRRLFDAMPVRSTVSWNAMVHQYIRHSNVGDAYELFLAMPRRDVVSWNT 224 Query: 137 MIGGLSQMGQSKEVI 93 MI G S +G+ E + Sbjct: 225 MIAGYSLVGRFMEAL 239 Score = 38.5 bits (88), Expect(2) = 2e-16 Identities = 20/55 (36%), Positives = 30/55 (54%) Frame = -3 Query: 526 LILWTSMIRAYVCANCPREGLGVFRKTREAGIMPDSVALATIASACAQLGNLDIA 362 L+ T+M RA+ + + L VFR G++PD+VALA +AC +L A Sbjct: 78 LVSRTAMARAHAASGQAAQALAVFRDMIADGVLPDNVALAVALAACHTTASLPAA 132 >ref|NP_001170755.1| uncharacterized protein LOC100384848 [Zea mays] gi|238007354|gb|ACR34712.1| unknown [Zea mays] Length = 464 Score = 73.6 bits (179), Expect(2) = 2e-16 Identities = 33/75 (44%), Positives = 47/75 (62%) Frame = -2 Query: 317 RYFVDSGSFDCARRLFYEVSPRNVVVWNTMIHQCVKHENLGEAQNLFKTMPDKDVVSWNM 138 R + + G +RRLF + R+ V WN M+HQ ++H N+G+A LF MP +DVVSWN Sbjct: 93 RVYGEYGELALSRRLFDAMPVRSTVSWNAMVHQYIRHSNVGDAYELFLAMPRRDVVSWNT 152 Query: 137 MIGGLSQMGQSKEVI 93 MI G S +G+ E + Sbjct: 153 MIAGYSLVGRFMEAL 167 Score = 38.5 bits (88), Expect(2) = 2e-16 Identities = 20/55 (36%), Positives = 30/55 (54%) Frame = -3 Query: 526 LILWTSMIRAYVCANCPREGLGVFRKTREAGIMPDSVALATIASACAQLGNLDIA 362 L+ T+M RA+ + + L VFR G++PD+VALA +AC +L A Sbjct: 6 LVSRTAMARAHAASGQAAQALAVFRDMIADGVLPDNVALAVALAACHTTASLPAA 60