BLASTX nr result

ID: Coptis24_contig00027572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027572
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273772.1| PREDICTED: mannan endo-1,4-beta-mannosidase ...   146   1e-33
emb|CBI21857.3| unnamed protein product [Vitis vinifera]              146   1e-33
ref|XP_004139946.1| PREDICTED: mannan endo-1,4-beta-mannosidase ...   142   4e-32
ref|XP_002330687.1| predicted protein [Populus trichocarpa] gi|2...   140   8e-32
gb|ABK95966.1| unknown [Populus trichocarpa]                          140   8e-32

>ref|XP_002273772.1| PREDICTED: mannan endo-1,4-beta-mannosidase 2-like [Vitis vinifera]
          Length = 437

 Score =  146 bits (369), Expect = 1e-33
 Identities = 67/82 (81%), Positives = 76/82 (92%)
 Frame = -1

Query: 247 WNSYWLMDQAVEEYSRPRVRAMLQAGVKMGLTVCRTWAFNDGGYNALQISPSRFDEHVFQ 68
           WNSYWLMDQAV+EYS+PRVRAMLQAG KMGLTVCRTWAFNDG Y+ALQISP RFDE VF+
Sbjct: 65  WNSYWLMDQAVDEYSKPRVRAMLQAGAKMGLTVCRTWAFNDGAYHALQISPGRFDERVFK 124

Query: 67  GLDYVIAEARRHGIKLILSLVN 2
            LD+VIAEAR+ GI+L+L+LVN
Sbjct: 125 ALDHVIAEARKQGIRLLLTLVN 146


>emb|CBI21857.3| unnamed protein product [Vitis vinifera]
          Length = 432

 Score =  146 bits (369), Expect = 1e-33
 Identities = 67/82 (81%), Positives = 76/82 (92%)
 Frame = -1

Query: 247 WNSYWLMDQAVEEYSRPRVRAMLQAGVKMGLTVCRTWAFNDGGYNALQISPSRFDEHVFQ 68
           WNSYWLMDQAV+EYS+PRVRAMLQAG KMGLTVCRTWAFNDG Y+ALQISP RFDE VF+
Sbjct: 60  WNSYWLMDQAVDEYSKPRVRAMLQAGAKMGLTVCRTWAFNDGAYHALQISPGRFDERVFK 119

Query: 67  GLDYVIAEARRHGIKLILSLVN 2
            LD+VIAEAR+ GI+L+L+LVN
Sbjct: 120 ALDHVIAEARKQGIRLLLTLVN 141


>ref|XP_004139946.1| PREDICTED: mannan endo-1,4-beta-mannosidase 2-like [Cucumis
           sativus] gi|449475777|ref|XP_004154548.1| PREDICTED:
           mannan endo-1,4-beta-mannosidase 2-like [Cucumis
           sativus]
          Length = 431

 Score =  142 bits (357), Expect = 4e-32
 Identities = 63/82 (76%), Positives = 74/82 (90%)
 Frame = -1

Query: 247 WNSYWLMDQAVEEYSRPRVRAMLQAGVKMGLTVCRTWAFNDGGYNALQISPSRFDEHVFQ 68
           WNSYW MD +VEEY +PR+RAMLQA  KMGLTVCRTWAFNDGGYNALQ+SP RF+E VF+
Sbjct: 60  WNSYWFMDHSVEEYRKPRIRAMLQAARKMGLTVCRTWAFNDGGYNALQVSPGRFNERVFK 119

Query: 67  GLDYVIAEARRHGIKLILSLVN 2
            LD+VIAE+R+HGI+L+LSLVN
Sbjct: 120 ALDHVIAESRQHGIRLLLSLVN 141


>ref|XP_002330687.1| predicted protein [Populus trichocarpa] gi|222872291|gb|EEF09422.1|
           predicted protein [Populus trichocarpa]
          Length = 435

 Score =  140 bits (354), Expect = 8e-32
 Identities = 63/82 (76%), Positives = 73/82 (89%)
 Frame = -1

Query: 247 WNSYWLMDQAVEEYSRPRVRAMLQAGVKMGLTVCRTWAFNDGGYNALQISPSRFDEHVFQ 68
           WNSYWLMD +V+E  +PRV AML+AG KMGLTVCRTWAFNDGGYNALQ+SP RFDE V +
Sbjct: 64  WNSYWLMDHSVDEDRKPRVGAMLEAGAKMGLTVCRTWAFNDGGYNALQVSPGRFDERVLR 123

Query: 67  GLDYVIAEARRHGIKLILSLVN 2
            LDYVIAEAR+HG++L+LSLVN
Sbjct: 124 ALDYVIAEARQHGVRLLLSLVN 145


>gb|ABK95966.1| unknown [Populus trichocarpa]
          Length = 435

 Score =  140 bits (354), Expect = 8e-32
 Identities = 63/82 (76%), Positives = 73/82 (89%)
 Frame = -1

Query: 247 WNSYWLMDQAVEEYSRPRVRAMLQAGVKMGLTVCRTWAFNDGGYNALQISPSRFDEHVFQ 68
           WNSYWLMD +V+E  +PRV AML+AG KMGLTVCRTWAFNDGGYNALQ+SP RFDE V +
Sbjct: 64  WNSYWLMDHSVDEDRKPRVGAMLEAGAKMGLTVCRTWAFNDGGYNALQVSPGRFDERVLR 123

Query: 67  GLDYVIAEARRHGIKLILSLVN 2
            LDYVIAEAR+HG++L+LSLVN
Sbjct: 124 ALDYVIAEARQHGVRLLLSLVN 145


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