BLASTX nr result

ID: Coptis24_contig00027567 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027567
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28600.3| unnamed protein product [Vitis vinifera]               91   1e-16
ref|XP_002271203.1| PREDICTED: putative disease resistance prote...    91   1e-16
emb|CAN82122.1| hypothetical protein VITISV_009093 [Vitis vinifera]    91   1e-16
ref|XP_002525457.1| leucine-rich repeat containing protein, puta...    86   2e-15
tpg|DAA49372.1| TPA: hypothetical protein ZEAMMB73_353302 [Zea m...    84   9e-15

>emb|CBI28600.3| unnamed protein product [Vitis vinifera]
          Length = 949

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 56/154 (36%), Positives = 89/154 (57%), Gaps = 1/154 (0%)
 Frame = +1

Query: 1   LACSIKTGECSALDGSRRTTVPQGTRHLSLILKSSQSPSIIHCTHQSSPYLHTLILYDYM 180
           LA S+   +CSA++  R+ ++P  TRH+S++ K  +   +I  +  ++  + + +L    
Sbjct: 365 LARSVSGSDCSAVEVGRQVSIPAATRHISMVCKEREF--VIPKSLLNAGKVRSFLLLVGW 422

Query: 181 DNRWDAQFNFLS-FISLRAMNLAIMHITTLSESIGKLKHLRYLILSLTKITSLPESICGL 357
                   NF+S F SLRA++++      LS+SIG LKHLRYL LS  +I  LP SICGL
Sbjct: 423 QKIPKVSHNFISSFKSLRALDISSTRAKKLSKSIGALKHLRYLNLSGARIKKLPSSICGL 482

Query: 358 TNLQTLKLASCYHLQTLPQHIGNISSLKGLFVFS 459
             LQTL L  C  L+ LP+ +  +  L+ L +++
Sbjct: 483 LYLQTLILKHCDLLEMLPKDLRKLIFLRHLNIYA 516


>ref|XP_002271203.1| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 1179

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 56/154 (36%), Positives = 89/154 (57%), Gaps = 1/154 (0%)
 Frame = +1

Query: 1   LACSIKTGECSALDGSRRTTVPQGTRHLSLILKSSQSPSIIHCTHQSSPYLHTLILYDYM 180
           LA S+   +CSA++  R+ ++P  TRH+S++ K  +   +I  +  ++  + + +L    
Sbjct: 500 LARSVSGSDCSAVEVGRQVSIPAATRHISMVCKEREF--VIPKSLLNAGKVRSFLLLVGW 557

Query: 181 DNRWDAQFNFLS-FISLRAMNLAIMHITTLSESIGKLKHLRYLILSLTKITSLPESICGL 357
                   NF+S F SLRA++++      LS+SIG LKHLRYL LS  +I  LP SICGL
Sbjct: 558 QKIPKVSHNFISSFKSLRALDISSTRAKKLSKSIGALKHLRYLNLSGARIKKLPSSICGL 617

Query: 358 TNLQTLKLASCYHLQTLPQHIGNISSLKGLFVFS 459
             LQTL L  C  L+ LP+ +  +  L+ L +++
Sbjct: 618 LYLQTLILKHCDLLEMLPKDLRKLIFLRHLNIYA 651


>emb|CAN82122.1| hypothetical protein VITISV_009093 [Vitis vinifera]
          Length = 1697

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 56/154 (36%), Positives = 89/154 (57%), Gaps = 1/154 (0%)
 Frame = +1

Query: 1   LACSIKTGECSALDGSRRTTVPQGTRHLSLILKSSQSPSIIHCTHQSSPYLHTLILYDYM 180
           LA S+   +CSA++  R+ ++P  TRH+S++ K  +   +I  +  ++  + + +L    
Sbjct: 500 LARSVSGSDCSAVEVGRQVSIPAATRHISMVCKEREF--VIPKSLLNAGKVRSFLLLVGW 557

Query: 181 DNRWDAQFNFLS-FISLRAMNLAIMHITTLSESIGKLKHLRYLILSLTKITSLPESICGL 357
                   NF+S F SLRA++++      LS+SIG LKHLRYL LS  +I  LP SICGL
Sbjct: 558 QKIPKVSHNFISSFKSLRALDISSTRAKKLSKSIGALKHLRYLNLSGARIKKLPSSICGL 617

Query: 358 TNLQTLKLASCYHLQTLPQHIGNISSLKGLFVFS 459
             LQTL L  C  L+ LP+ +  +  L+ L +++
Sbjct: 618 LYLQTLILKHCDLLEMLPKDLRKLIFLRHLNIYA 651


>ref|XP_002525457.1| leucine-rich repeat containing protein, putative [Ricinus communis]
           gi|223535270|gb|EEF36947.1| leucine-rich repeat
           containing protein, putative [Ricinus communis]
          Length = 1177

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 56/140 (40%), Positives = 81/140 (57%), Gaps = 1/140 (0%)
 Frame = +1

Query: 25  ECSALDGSRRTTVPQGTRHLSLILKSSQSPSIIHCTHQSSPYLHTLI-LYDYMDNRWDAQ 201
           ECS L+      +P+GTRHLSL+  +  + +I  C +++   LHTL+ L +  +     +
Sbjct: 508 ECSVLEAGSNQIIPKGTRHLSLVC-NKVTENIPKCFYKAKN-LHTLLALTEKQEAVQVPR 565

Query: 202 FNFLSFISLRAMNLAIMHITTLSESIGKLKHLRYLILSLTKITSLPESICGLTNLQTLKL 381
             FL F  L  + L    I  L  S+GKL HLR L +S T I +LP+SI  L NLQTL L
Sbjct: 566 SLFLKFRYLHVLILNSTCIRKLPNSLGKLIHLRLLDVSHTDIEALPKSITSLVNLQTLNL 625

Query: 382 ASCYHLQTLPQHIGNISSLK 441
           + C+ LQ LP++  N+ SL+
Sbjct: 626 SHCFELQELPKNTRNLISLR 645


>tpg|DAA49372.1| TPA: hypothetical protein ZEAMMB73_353302 [Zea mays]
          Length = 1119

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 60/162 (37%), Positives = 83/162 (51%), Gaps = 15/162 (9%)
 Frame = +1

Query: 1   LACSIKTGECSA-LDGSRRTTVPQGTRHLSLILKSSQSPS---IIHCTHQSSPYLHTLI- 165
           LA ++   +C   L G +R +VP   RHL+++     S     +I C       LHTLI 
Sbjct: 499 LASNVSGADCGCYLMGRQRYSVPVRVRHLTVVFCKDASQDMFQVISCGES----LHTLIA 554

Query: 166 ----------LYDYMDNRWDAQFNFLSFISLRAMNLAIMHITTLSESIGKLKHLRYLILS 315
                     + D +D R         +  LRA++L+   +T L  SIGKLKHLR L L 
Sbjct: 555 LGGSKDVDLKIPDDIDKR---------YTRLRALDLSNFGVTALPRSIGKLKHLRCLQLQ 605

Query: 316 LTKITSLPESICGLTNLQTLKLASCYHLQTLPQHIGNISSLK 441
            T+I  LPESIC L NLQTL L +CY L+ LP  + ++  L+
Sbjct: 606 GTRIRCLPESICELYNLQTLGLRNCYELEELPHDLKSLCKLR 647


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