BLASTX nr result

ID: Coptis24_contig00027562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027562
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277121.1| PREDICTED: uncharacterized protein LOC100240...   126   2e-27
emb|CAN67638.1| hypothetical protein VITISV_044257 [Vitis vinifera]   122   2e-26
ref|NP_565136.1| uncharacterized protein [Arabidopsis thaliana] ...    91   1e-16
gb|AAK68828.1| Unknown protein [Arabidopsis thaliana]                  91   1e-16
dbj|BAB41200.1| unnamed protein product [Nicotiana tabacum]            90   2e-16

>ref|XP_002277121.1| PREDICTED: uncharacterized protein LOC100240987 [Vitis vinifera]
           gi|297745627|emb|CBI40792.3| unnamed protein product
           [Vitis vinifera]
          Length = 191

 Score =  126 bits (317), Expect = 2e-27
 Identities = 74/161 (45%), Positives = 96/161 (59%), Gaps = 1/161 (0%)
 Frame = +3

Query: 3   EYSVSVTVSQVLKSETTQS-CFLCNSDRLYYNEFIQALNPSEELQMGQIYFILSTTRLQY 179
           EYS  VTVSQVL  E++ S CF+CNSD LYY+++I A+N  +EL  GQIYF+LS T+LQY
Sbjct: 31  EYSAPVTVSQVLHFESSSSSCFVCNSDSLYYDDYIPAMNADDELLPGQIYFLLSATKLQY 90

Query: 180 RLTAQDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVVMEVNQRVNEERFDGVKRFDQKL 359
           RLTA +M                              V+EVNQ+V E    GVK+  +K 
Sbjct: 91  RLTASEMAALAVKASIALQNHSKKAGHRRNNKSRISPVLEVNQKVMEAEVGGVKKSFEK- 149

Query: 360 XXXXXXXXXXXXKLQRSASKRAKMAIRSFRLRLSTIHEGTV 482
                       KLQR +S+RA+MA+RSFRLRL+TI+EG+V
Sbjct: 150 PALGVSRHGSLRKLQRHSSRRARMAVRSFRLRLTTIYEGSV 190


>emb|CAN67638.1| hypothetical protein VITISV_044257 [Vitis vinifera]
          Length = 191

 Score =  122 bits (307), Expect = 2e-26
 Identities = 72/161 (44%), Positives = 95/161 (59%), Gaps = 1/161 (0%)
 Frame = +3

Query: 3   EYSVSVTVSQVLKSETTQS-CFLCNSDRLYYNEFIQALNPSEELQMGQIYFILSTTRLQY 179
           EYS  VTVSQVL  E++ S CF+CNSD LYY+++I A+N  +EL  GQIYF+LS  +LQY
Sbjct: 31  EYSAPVTVSQVLHFESSSSSCFVCNSDSLYYDDYIPAMNADDELLPGQIYFLLSAXKLQY 90

Query: 180 RLTAQDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVVMEVNQRVNEERFDGVKRFDQKL 359
           RL+A +M                              V+EVNQ+V E    GVK+  +K 
Sbjct: 91  RLSASEMAALAVKASIALQNHSKKAGHRRNNKSRISPVLEVNQKVMEAEVGGVKKSFEK- 149

Query: 360 XXXXXXXXXXXXKLQRSASKRAKMAIRSFRLRLSTIHEGTV 482
                       KLQR +S+RA+MA+RSFRLRL+TI+EG+V
Sbjct: 150 PALGVSRHGSVRKLQRHSSRRARMAVRSFRLRLTTIYEGSV 190


>ref|NP_565136.1| uncharacterized protein [Arabidopsis thaliana]
           gi|12323985|gb|AAG51956.1|AC015450_17 unknown protein;
           83277-83927 [Arabidopsis thaliana]
           gi|21592540|gb|AAM64489.1| unknown [Arabidopsis
           thaliana] gi|23197634|gb|AAN15344.1| Unknown protein
           [Arabidopsis thaliana] gi|332197742|gb|AEE35863.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 216

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 67/184 (36%), Positives = 84/184 (45%), Gaps = 25/184 (13%)
 Frame = +3

Query: 3   EYSVSVTVSQVLKSETTQSC--------FLCNSDRLYYNEFIQALNPSEELQMGQIYFIL 158
           EY V V  SQVL+SE+T S         FLCNSD LYY++FI A+   E LQ  QIYF+L
Sbjct: 30  EYDVPVLASQVLESESTSSSSSSSSSSYFLCNSDSLYYDDFIPAIESDEILQANQIYFVL 89

Query: 159 STTRLQYRLTAQDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVV----------MEVNQ 308
             ++ QYRL+A DM                            PVV            VN 
Sbjct: 90  PISKRQYRLSASDMAALAVKASVAIEKAAGKKNRRRRSGRISPVVTLNQANDNRIAAVNN 149

Query: 309 RVNEERFDGV-------KRFDQKLXXXXXXXXXXXXKLQRSASKRAKMAIRSFRLRLSTI 467
           R+  E  + +        R                 KL+R  S RAK+A+RSFRLRLSTI
Sbjct: 150 RIGGEATNMMMQKGKLPNRTTPFKDTNGYSRSGSVRKLKRYTSGRAKLAVRSFRLRLSTI 209

Query: 468 HEGT 479
           +EG+
Sbjct: 210 YEGS 213


>gb|AAK68828.1| Unknown protein [Arabidopsis thaliana]
          Length = 216

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 68/184 (36%), Positives = 85/184 (46%), Gaps = 25/184 (13%)
 Frame = +3

Query: 3   EYSVSVTVSQVLKSETTQSC--------FLCNSDRLYYNEFIQALNPSEELQMGQIYFIL 158
           EY V V  SQVL+SE+T S         FLCNSD LYY++FI A+   E LQ  QIYF+L
Sbjct: 30  EYDVPVLASQVLESESTSSSSSSSSSSYFLCNSDSLYYDDFIPAIESDEILQANQIYFVL 89

Query: 159 STTRLQYRLTAQDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVV----------MEVNQ 308
             ++ QYRL+A DM                            PVV            VN 
Sbjct: 90  PISKRQYRLSASDMAALAVXASVAIEKAAGKKNRRRRSGRISPVVTLNQANDNRIAAVNN 149

Query: 309 RVNEERFDGV-------KRFDQKLXXXXXXXXXXXXKLQRSASKRAKMAIRSFRLRLSTI 467
           R+  E  + +        R                 KL+R  S RAK+A+RSFRLRLSTI
Sbjct: 150 RIGGEATNMMMQKGKLPNRTTPFKDTNGYSRSGSVRKLKRYTSGRAKLAVRSFRLRLSTI 209

Query: 468 HEGT 479
           +EG+
Sbjct: 210 YEGS 213


>dbj|BAB41200.1| unnamed protein product [Nicotiana tabacum]
          Length = 205

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 58/171 (33%), Positives = 89/171 (52%), Gaps = 11/171 (6%)
 Frame = +3

Query: 3   EYSVSVTVSQVLKSE-TTQSCFLCNSDRLYYNEFIQALNPSEELQMGQIYFILSTTRLQY 179
           +Y+V + VSQVL+SE ++++ F+CNSDRLY+++FI  L+   +LQ GQIYF+L T++LQY
Sbjct: 32  QYTVPINVSQVLQSEMSSEASFICNSDRLYFDDFIPRLDSEYQLQPGQIYFVLPTSKLQY 91

Query: 180 RLTAQDM---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXPVVMEVNQRVNEERFD 332
           RL+A +M                                     P++++V     +    
Sbjct: 92  RLSASEMAALAVKASAALEDLNKNNRRHSKKFIRKNKKSNSRISPMLLQVEDESRDNYTQ 151

Query: 333 GVKRFD-QKLXXXXXXXXXXXXKLQRSASKRAKMAIRSFRLRLSTIHEGTV 482
               +    +            KLQR +S+RAKMA+RSFR +L TI EG+V
Sbjct: 152 SQSNYKAPSMGLGVSMRSASVRKLQRISSRRAKMAVRSFR-KLMTIQEGSV 201


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