BLASTX nr result
ID: Coptis24_contig00027553
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00027553
(646 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274607.1| PREDICTED: N(2),N(2)-dimethylguanosine tRNA ... 131 2e-47
emb|CBI25377.3| unnamed protein product [Vitis vinifera] 131 2e-47
ref|XP_002523049.1| N(2),N(2)-dimethylguanosine tRNA methyltrans... 124 7e-45
ref|XP_002319867.1| predicted protein [Populus trichocarpa] gi|2... 130 5e-42
ref|XP_004146475.1| PREDICTED: tRNA (guanine(26)-N(2))-dimethylt... 120 3e-39
>ref|XP_002274607.1| PREDICTED: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1
[Vitis vinifera] gi|147780177|emb|CAN75521.1|
hypothetical protein VITISV_043594 [Vitis vinifera]
Length = 424
Score = 131 bits (329), Expect(3) = 2e-47
Identities = 56/78 (71%), Positives = 67/78 (85%)
Frame = -2
Query: 366 LTSGAVRDASVLGYHVSPLFSYYSYHGPVFRVMLLVNRGKLPENRHYGFISYCNQCGNSQ 187
L GA+R+ASVLGY ++PLFSYYSYHGPVFRVML +NRGKLPENR+YGFISYC +CGNSQ
Sbjct: 225 LIGGALREASVLGYRITPLFSYYSYHGPVFRVMLRMNRGKLPENRNYGFISYCTKCGNSQ 284
Query: 186 TILWGDLGKICCPCSNGE 133
W +LG+I CPCS+ +
Sbjct: 285 AFSWNELGRISCPCSDAK 302
Score = 57.0 bits (136), Expect(3) = 2e-47
Identities = 26/47 (55%), Positives = 31/47 (65%)
Frame = -3
Query: 584 ANQECRGTILSNFENGGGVLESEERWVVTHSDANRVMAECYLKKGFF 444
AN+ TIL N G G E RWVVTH+DANRVM ECYL++ F+
Sbjct: 111 ANENYGRTILENLSQGLGGSGEERRWVVTHTDANRVMTECYLRRDFY 157
Score = 48.1 bits (113), Expect(3) = 2e-47
Identities = 25/49 (51%), Positives = 29/49 (59%), Gaps = 17/49 (34%)
Frame = -1
Query: 457 KRDFFYLIDIDSFGSNSSFFRSAYD-----------------SGGHRPH 362
+RDF+ LID+DSFGS SSF RSAY+ SGGHRPH
Sbjct: 153 RRDFYDLIDVDSFGSESSFLRSAYNALKLDGLFYVTSTDGYTSGGHRPH 201
>emb|CBI25377.3| unnamed protein product [Vitis vinifera]
Length = 338
Score = 131 bits (329), Expect(3) = 2e-47
Identities = 56/78 (71%), Positives = 67/78 (85%)
Frame = -2
Query: 366 LTSGAVRDASVLGYHVSPLFSYYSYHGPVFRVMLLVNRGKLPENRHYGFISYCNQCGNSQ 187
L GA+R+ASVLGY ++PLFSYYSYHGPVFRVML +NRGKLPENR+YGFISYC +CGNSQ
Sbjct: 139 LIGGALREASVLGYRITPLFSYYSYHGPVFRVMLRMNRGKLPENRNYGFISYCTKCGNSQ 198
Query: 186 TILWGDLGKICCPCSNGE 133
W +LG+I CPCS+ +
Sbjct: 199 AFSWNELGRISCPCSDAK 216
Score = 57.0 bits (136), Expect(3) = 2e-47
Identities = 26/47 (55%), Positives = 31/47 (65%)
Frame = -3
Query: 584 ANQECRGTILSNFENGGGVLESEERWVVTHSDANRVMAECYLKKGFF 444
AN+ TIL N G G E RWVVTH+DANRVM ECYL++ F+
Sbjct: 25 ANENYGRTILENLSQGLGGSGEERRWVVTHTDANRVMTECYLRRDFY 71
Score = 48.1 bits (113), Expect(3) = 2e-47
Identities = 25/49 (51%), Positives = 29/49 (59%), Gaps = 17/49 (34%)
Frame = -1
Query: 457 KRDFFYLIDIDSFGSNSSFFRSAYD-----------------SGGHRPH 362
+RDF+ LID+DSFGS SSF RSAY+ SGGHRPH
Sbjct: 67 RRDFYDLIDVDSFGSESSFLRSAYNALKLDGLFYVTSTDGYTSGGHRPH 115
>ref|XP_002523049.1| N(2),N(2)-dimethylguanosine tRNA methyltransferase, putative
[Ricinus communis] gi|223537732|gb|EEF39353.1|
N(2),N(2)-dimethylguanosine tRNA methyltransferase,
putative [Ricinus communis]
Length = 422
Score = 124 bits (310), Expect(3) = 7e-45
Identities = 56/80 (70%), Positives = 65/80 (81%), Gaps = 1/80 (1%)
Frame = -2
Query: 366 LTSGAVRDASVLGYHVSPLFSYYSYHGPVFRVMLLVNRGKLPENRHYGFISYCNQCGNSQ 187
L GAVR+AS+LGYHV+PLFSYYSYHGPVFRVML VNRGK ENRHYGFI+YCNQCGN++
Sbjct: 220 LIGGAVREASLLGYHVTPLFSYYSYHGPVFRVMLRVNRGKEHENRHYGFITYCNQCGNTR 279
Query: 186 TILWGDLGKICCP-CSNGEF 130
W +LG C CSN ++
Sbjct: 280 AFSWEELGHFSCSFCSNEDY 299
Score = 56.6 bits (135), Expect(3) = 7e-45
Identities = 25/47 (53%), Positives = 31/47 (65%)
Frame = -3
Query: 584 ANQECRGTILSNFENGGGVLESEERWVVTHSDANRVMAECYLKKGFF 444
AN E RG I+ N + G E +WVVTH DANRV+ ECYL++ FF
Sbjct: 106 ANDEYRGVIVGNLKQVGRGFGDERKWVVTHFDANRVLTECYLQRDFF 152
Score = 47.0 bits (110), Expect(3) = 7e-45
Identities = 26/49 (53%), Positives = 28/49 (57%), Gaps = 17/49 (34%)
Frame = -1
Query: 457 KRDFFYLIDIDSFGSNSSFFRSA-----------------YDSGGHRPH 362
+RDFF LIDIDSFGS+S F RSA Y SGGHRPH
Sbjct: 148 QRDFFDLIDIDSFGSDSLFLRSAMSALKLDGLLYLTSTDGYSSGGHRPH 196
>ref|XP_002319867.1| predicted protein [Populus trichocarpa] gi|222858243|gb|EEE95790.1|
predicted protein [Populus trichocarpa]
Length = 428
Score = 130 bits (327), Expect(3) = 5e-42
Identities = 58/81 (71%), Positives = 66/81 (81%)
Frame = -2
Query: 366 LTSGAVRDASVLGYHVSPLFSYYSYHGPVFRVMLLVNRGKLPENRHYGFISYCNQCGNSQ 187
L GAVR+ASVLGY+++PLFSYYSYHGPVFRVML VNRGKL ENRHYGFI+YCN CGNSQ
Sbjct: 224 LIGGAVREASVLGYYITPLFSYYSYHGPVFRVMLRVNRGKLLENRHYGFITYCNNCGNSQ 283
Query: 186 TILWGDLGKICCPCSNGEFNR 124
W +LG+I C CS +R
Sbjct: 284 EFSWAELGQISCSCSGSHGSR 304
Score = 53.1 bits (126), Expect(3) = 5e-42
Identities = 25/47 (53%), Positives = 30/47 (63%)
Frame = -3
Query: 584 ANQECRGTILSNFENGGGVLESEERWVVTHSDANRVMAECYLKKGFF 444
AN E R IL N + E +WVVTH DANRV++ECYL+K FF
Sbjct: 109 ANDEHRRVILENLKRVDRGFGDERKWVVTHLDANRVLSECYLQKDFF 155
Score = 34.3 bits (77), Expect(3) = 5e-42
Identities = 22/49 (44%), Positives = 26/49 (53%), Gaps = 18/49 (36%)
Frame = -1
Query: 457 KRDFFYLIDIDSFGSN-SSFFRSA-----------------YDSGGHRP 365
++DFF LIDIDSFGS+ S F RSA + SGGH P
Sbjct: 151 QKDFFDLIDIDSFGSDISLFLRSAMNTLSFDGLLYVTSTDGHSSGGHHP 199
>ref|XP_004146475.1| PREDICTED: tRNA (guanine(26)-N(2))-dimethyltransferase-like
[Cucumis sativus]
Length = 467
Score = 120 bits (301), Expect(3) = 3e-39
Identities = 48/76 (63%), Positives = 63/76 (82%)
Frame = -2
Query: 366 LTSGAVRDASVLGYHVSPLFSYYSYHGPVFRVMLLVNRGKLPENRHYGFISYCNQCGNSQ 187
L G R+ASVLG++ +PLFSYYSYHGPVFRVML +NRG++ +NRHYGF+SYC +CGNSQ
Sbjct: 234 LIGGVAREASVLGFYATPLFSYYSYHGPVFRVMLRINRGRIHKNRHYGFVSYCEKCGNSQ 293
Query: 186 TILWGDLGKICCPCSN 139
W +LG++ CPC++
Sbjct: 294 AFSWSELGQMSCPCND 309
Score = 46.6 bits (109), Expect(3) = 3e-39
Identities = 23/47 (48%), Positives = 27/47 (57%)
Frame = -3
Query: 584 ANQECRGTILSNFENGGGVLESEERWVVTHSDANRVMAECYLKKGFF 444
AN E R I+ N + RW+VT+ DANRVM E YLKK FF
Sbjct: 120 ANDENRRVIVKNLSRVAENIGDNRRWLVTNCDANRVMTEFYLKKDFF 166
Score = 41.2 bits (95), Expect(3) = 3e-39
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 17/48 (35%)
Frame = -1
Query: 457 KRDFFYLIDIDSFGSNSSFFRSA-----------------YDSGGHRP 365
K+DFF ID+DSFGS+SSF R A + SGGHRP
Sbjct: 162 KKDFFDFIDVDSFGSDSSFLRPAINALKLDGLLYVTSTDGFSSGGHRP 209