BLASTX nr result

ID: Coptis24_contig00027550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027550
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514630.1| Cleavage stimulation factor 50 kDa subunit, ...    54   1e-05

>ref|XP_002514630.1| Cleavage stimulation factor 50 kDa subunit, putative [Ricinus
           communis] gi|223546234|gb|EEF47736.1| Cleavage
           stimulation factor 50 kDa subunit, putative [Ricinus
           communis]
          Length = 435

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 23/30 (76%), Positives = 26/30 (86%)
 Frame = -2

Query: 91  GTDHHIAHL*DINTLQCYLTANDPEIGVNG 2
           GTDH IAHL D+NT QCYL+AN PEIG+NG
Sbjct: 244 GTDHQIAHLYDVNTFQCYLSANVPEIGMNG 273


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