BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027536
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23460.3| unnamed protein product [Vitis vinifera]              169   2e-40
ref|XP_002267979.1| PREDICTED: pentatricopeptide repeat-containi...   169   2e-40
ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containi...   154   6e-36
ref|XP_002331159.1| predicted protein [Populus trichocarpa] gi|1...   154   6e-36
gb|AFW86058.1| hypothetical protein ZEAMMB73_674343 [Zea mays]        154   7e-36

>emb|CBI23460.3| unnamed protein product [Vitis vinifera]
          Length = 444

 Score =  169 bits (428), Expect = 2e-40
 Identities = 82/95 (86%), Positives = 90/95 (94%)
 Frame = +3

Query: 3   RVIEEMRRDGRVAGDWTTYSNLASIYVGAGMFEKAERALKELENRNACRDLSAYQYLITL 182
           RVIEEM+RDGRVA DWTTYSNLASIYV AG+FEKAE+ALKELE RNACRDL+A+Q+LITL
Sbjct: 213 RVIEEMKRDGRVASDWTTYSNLASIYVDAGVFEKAEKALKELEKRNACRDLTAFQFLITL 272

Query: 183 YGRTGNLLEVHRVWRSLRLAFPKMANLSYLNMIQV 287
           YGR GNLLEV+RVWRSLRLAFPK AN+SYLNMIQV
Sbjct: 273 YGRIGNLLEVYRVWRSLRLAFPKTANVSYLNMIQV 307


>ref|XP_002267979.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770
           [Vitis vinifera]
          Length = 489

 Score =  169 bits (428), Expect = 2e-40
 Identities = 82/95 (86%), Positives = 90/95 (94%)
 Frame = +3

Query: 3   RVIEEMRRDGRVAGDWTTYSNLASIYVGAGMFEKAERALKELENRNACRDLSAYQYLITL 182
           RVIEEM+RDGRVA DWTTYSNLASIYV AG+FEKAE+ALKELE RNACRDL+A+Q+LITL
Sbjct: 213 RVIEEMKRDGRVASDWTTYSNLASIYVDAGVFEKAEKALKELEKRNACRDLTAFQFLITL 272

Query: 183 YGRTGNLLEVHRVWRSLRLAFPKMANLSYLNMIQV 287
           YGR GNLLEV+RVWRSLRLAFPK AN+SYLNMIQV
Sbjct: 273 YGRIGNLLEVYRVWRSLRLAFPKTANVSYLNMIQV 307


>ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g60770-like [Glycine max]
          Length = 490

 Score =  154 bits (390), Expect = 6e-36
 Identities = 75/95 (78%), Positives = 86/95 (90%)
 Frame = +3

Query: 3   RVIEEMRRDGRVAGDWTTYSNLASIYVGAGMFEKAERALKELENRNACRDLSAYQYLITL 182
           RV +EM+R G+V GDWTTYSNLASI+V AG+F+KAE ALKELE RNA +DL+AYQ+LITL
Sbjct: 214 RVHDEMKRGGQVTGDWTTYSNLASIFVDAGLFDKAEVALKELEKRNAFKDLTAYQFLITL 273

Query: 183 YGRTGNLLEVHRVWRSLRLAFPKMANLSYLNMIQV 287
           YGRTGNL EV+RVWRSLRLAFPK AN+SYLNMIQV
Sbjct: 274 YGRTGNLYEVYRVWRSLRLAFPKTANISYLNMIQV 308


>ref|XP_002331159.1| predicted protein [Populus trichocarpa] gi|118487894|gb|ABK95769.1|
           unknown [Populus trichocarpa]
           gi|222873242|gb|EEF10373.1| predicted protein [Populus
           trichocarpa]
          Length = 490

 Score =  154 bits (390), Expect = 6e-36
 Identities = 75/95 (78%), Positives = 86/95 (90%)
 Frame = +3

Query: 3   RVIEEMRRDGRVAGDWTTYSNLASIYVGAGMFEKAERALKELENRNACRDLSAYQYLITL 182
           RVIEEM+RDGRVA +WTTYSNLASIYV AG F+KAE+ALKELE  NA +DL A+Q+LITL
Sbjct: 214 RVIEEMKRDGRVAANWTTYSNLASIYVDAGYFDKAEKALKELEKINANKDLFAFQFLITL 273

Query: 183 YGRTGNLLEVHRVWRSLRLAFPKMANLSYLNMIQV 287
           YGRTG L+EV+R+WRSLRLAFPK AN+SYLNMIQV
Sbjct: 274 YGRTGKLIEVYRIWRSLRLAFPKTANISYLNMIQV 308


>gb|AFW86058.1| hypothetical protein ZEAMMB73_674343 [Zea mays]
          Length = 626

 Score =  154 bits (389), Expect = 7e-36
 Identities = 76/95 (80%), Positives = 83/95 (87%)
 Frame = +3

Query: 3   RVIEEMRRDGRVAGDWTTYSNLASIYVGAGMFEKAERALKELENRNACRDLSAYQYLITL 182
           RVIEEM+RDGRVA DWTTYSNLASIYV AGMFEKAE ALKELE RN   D+ AYQ+LITL
Sbjct: 300 RVIEEMKRDGRVAPDWTTYSNLASIYVEAGMFEKAEAALKELEKRNTSNDIEAYQFLITL 359

Query: 183 YGRTGNLLEVHRVWRSLRLAFPKMANLSYLNMIQV 287
           YGRT NL+EVHRVWRSL+   P+MAN+SYLNMIQV
Sbjct: 360 YGRTQNLVEVHRVWRSLKRDNPRMANMSYLNMIQV 394