BLASTX nr result
ID: Coptis24_contig00027533
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00027533
(566 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_849784.1| protein argonaute [Arabidopsis thaliana] gi|334... 108 1e-33
ref|NP_175274.1| protein argonaute [Arabidopsis thaliana] gi|113... 107 3e-33
ref|XP_004134114.1| PREDICTED: protein argonaute 10-like [Cucumi... 115 1e-32
gb|AFV46191.1| argonaute1-2, partial [Solanum lycopersicum] 108 2e-32
gb|AFV15378.1| AGO1B [Solanum lycopersicum] 108 2e-32
>ref|NP_849784.1| protein argonaute [Arabidopsis thaliana]
gi|334183151|ref|NP_001185169.1| protein argonaute
[Arabidopsis thaliana] gi|332194167|gb|AEE32288.1|
protein argonaute [Arabidopsis thaliana]
gi|332194168|gb|AEE32289.1| protein argonaute
[Arabidopsis thaliana]
Length = 1050
Score = 108 bits (271), Expect(2) = 1e-33
Identities = 56/127 (44%), Positives = 80/127 (62%)
Frame = -1
Query: 539 PTVRSRSLLIIVINELIALYGESDLGG*RPVYDGRKSLFTAGPLPFNSNEYTILLVDDKN 360
P V SR + V+ +L+ Y +S LG P YDGRKSL+TAGPLPFNS E+ I L+D++
Sbjct: 217 PEVTSRGVNRAVMKQLVDNYRDSHLGSRLPAYDGRKSLYTAGPLPFNSKEFRINLLDEEV 276
Query: 359 GGEGSTRQREFKVAIKFVARPNXXXXXXXXXXXLADAQQEALKALDVVLKESSSNKYLFV 180
G G R+REFKV IK VAR + +DA QEAL+ LD+VL+E +++ ++
Sbjct: 277 GAGGQRREREFKVVIKLVARADLHHLGMFLEGKQSDAPQEALQVLDIVLRELPTSRIRYI 336
Query: 179 PPHSTYF 159
P +++
Sbjct: 337 PVGRSFY 343
Score = 59.7 bits (143), Expect(2) = 1e-33
Identities = 25/42 (59%), Positives = 32/42 (76%)
Frame = -3
Query: 129 YIVVGSSFFSPKLGQKSDIGDGLECWEGFYQSLRLTQMAVKV 4
YI VG SF+SP +G+K +GDGLE W GFYQS+R TQM + +
Sbjct: 335 YIPVGRSFYSPDIGKKQSLGDGLESWRGFYQSIRPTQMGLSL 376
>ref|NP_175274.1| protein argonaute [Arabidopsis thaliana]
gi|11386626|sp|O04379.1|AGO1_ARATH RecName: Full=Protein
argonaute 1 gi|5733867|gb|AAD49755.1|AC007932_3
Identical to Argonaute protein from Arabidopsis thaliana
gb|U91995. EST gb|AA720232 comes from this gene
[Arabidopsis thaliana] gi|2149640|gb|AAC18440.1|
Argonaute protein [Arabidopsis thaliana]
gi|24030354|gb|AAN41341.1| putative leaf development
protein Argonaute [Arabidopsis thaliana]
gi|332194166|gb|AEE32287.1| protein argonaute
[Arabidopsis thaliana]
Length = 1048
Score = 107 bits (268), Expect(2) = 3e-33
Identities = 56/118 (47%), Positives = 76/118 (64%)
Frame = -1
Query: 539 PTVRSRSLLIIVINELIALYGESDLGG*RPVYDGRKSLFTAGPLPFNSNEYTILLVDDKN 360
P V SR + V+ +L+ Y +S LG P YDGRKSL+TAGPLPFNS E+ I L+D++
Sbjct: 217 PEVTSRGVNRAVMKQLVDNYRDSHLGSRLPAYDGRKSLYTAGPLPFNSKEFRINLLDEEV 276
Query: 359 GGEGSTRQREFKVAIKFVARPNXXXXXXXXXXXLADAQQEALKALDVVLKESSSNKYL 186
G G R+REFKV IK VAR + +DA QEAL+ LD+VL+E +++Y+
Sbjct: 277 GAGGQRREREFKVVIKLVARADLHHLGMFLEGKQSDAPQEALQVLDIVLRELPTSRYI 334
Score = 59.7 bits (143), Expect(2) = 3e-33
Identities = 25/42 (59%), Positives = 32/42 (76%)
Frame = -3
Query: 129 YIVVGSSFFSPKLGQKSDIGDGLECWEGFYQSLRLTQMAVKV 4
YI VG SF+SP +G+K +GDGLE W GFYQS+R TQM + +
Sbjct: 333 YIPVGRSFYSPDIGKKQSLGDGLESWRGFYQSIRPTQMGLSL 374
>ref|XP_004134114.1| PREDICTED: protein argonaute 10-like [Cucumis sativus]
gi|449523115|ref|XP_004168570.1| PREDICTED: protein
argonaute 10-like [Cucumis sativus]
Length = 984
Score = 115 bits (287), Expect(2) = 1e-32
Identities = 62/117 (52%), Positives = 78/117 (66%)
Frame = -1
Query: 539 PTVRSRSLLIIVINELIALYGESDLGG*RPVYDGRKSLFTAGPLPFNSNEYTILLVDDKN 360
P V SR++ ++ EL+ LY ESDLG P YDGRKSL+TAG LPF E+TI LVD+++
Sbjct: 164 PEVASRTVNRAIMAELVRLYRESDLGKRLPAYDGRKSLYTAGELPFVWKEFTIKLVDEED 223
Query: 359 GGEGSTRQREFKVAIKFVARPNXXXXXXXXXXXLADAQQEALKALDVVLKESSSNKY 189
G G R+RE+KV IKFVAR N ADA QEAL+ LD+VL+E SS +Y
Sbjct: 224 GVSGPKREREYKVLIKFVARANLHHLGQFLAGKRADAPQEALQILDIVLRELSSKRY 280
Score = 50.4 bits (119), Expect(2) = 1e-32
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = -3
Query: 129 YIVVGSSFFSPKLGQKSDIGDGLECWEGFYQSLRLTQMAVKV 4
Y +G SFFSP + +GDGLE W GFYQS+R TQM + +
Sbjct: 280 YCPIGRSFFSPDIRSPQRLGDGLESWCGFYQSIRPTQMGLSL 321
>gb|AFV46191.1| argonaute1-2, partial [Solanum lycopersicum]
Length = 1152
Score = 108 bits (271), Expect(2) = 2e-32
Identities = 58/117 (49%), Positives = 74/117 (63%)
Frame = -1
Query: 539 PTVRSRSLLIIVINELIALYGESDLGG*RPVYDGRKSLFTAGPLPFNSNEYTILLVDDKN 360
P V SR + V+ +L+ LY ES LG P YDGRKSL+TAGPLPF E+ I L DD++
Sbjct: 318 PEVSSRGVNRAVMAQLVLLYQESHLGKRLPAYDGRKSLYTAGPLPFVQKEFKITLTDDED 377
Query: 359 GGEGSTRQREFKVAIKFVARPNXXXXXXXXXXXLADAQQEALKALDVVLKESSSNKY 189
G G+ R REFKV IKF +R + ADA QEAL+ LD+VL+E ++KY
Sbjct: 378 GPGGARRDREFKVVIKFASRADLHHLGMFLEGRQADAPQEALQVLDIVLRELPTSKY 434
Score = 55.8 bits (133), Expect(2) = 2e-32
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = -3
Query: 129 YIVVGSSFFSPKLGQKSDIGDGLECWEGFYQSLRLTQMAVKV 4
Y VG SF+SP LG++ +G+GLE W GFYQS+R TQM + +
Sbjct: 434 YCPVGRSFYSPNLGRRQPLGEGLESWRGFYQSIRPTQMGLSL 475
>gb|AFV15378.1| AGO1B [Solanum lycopersicum]
Length = 1152
Score = 108 bits (271), Expect(2) = 2e-32
Identities = 58/117 (49%), Positives = 74/117 (63%)
Frame = -1
Query: 539 PTVRSRSLLIIVINELIALYGESDLGG*RPVYDGRKSLFTAGPLPFNSNEYTILLVDDKN 360
P V SR + V+ +L+ LY ES LG P YDGRKSL+TAGPLPF E+ I L DD++
Sbjct: 318 PEVSSRGVNRAVMAQLVLLYQESHLGKRLPAYDGRKSLYTAGPLPFVQKEFKITLTDDED 377
Query: 359 GGEGSTRQREFKVAIKFVARPNXXXXXXXXXXXLADAQQEALKALDVVLKESSSNKY 189
G G+ R REFKV IKF +R + ADA QEAL+ LD+VL+E ++KY
Sbjct: 378 GPGGARRDREFKVVIKFASRADLHHLGMFLEGRQADAPQEALQVLDIVLRELPTSKY 434
Score = 55.8 bits (133), Expect(2) = 2e-32
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = -3
Query: 129 YIVVGSSFFSPKLGQKSDIGDGLECWEGFYQSLRLTQMAVKV 4
Y VG SF+SP LG++ +G+GLE W GFYQS+R TQM + +
Sbjct: 434 YCPVGRSFYSPNLGRRQPLGEGLESWRGFYQSIRPTQMGLSL 475